Asymmetric total synthesis of (+)-negamycin and (-)-3-epinegamycin

J. Org. Chem. , 1989, 54 (9), pp 2225–2233. DOI: 10.1021/jo00270a037. Publication Date: April 1989 .... Lab product prices hit by China tariffs. In ...
0 downloads 0 Views 1MB Size
J. Org. Chem. 1989,54, 2225-2233 Anal. Calcd for C16H2&04Si: c , 56.73; H, 7.74; N, 8.27. Found: C, 56.69; H, 7.82; N, 8.23. Method B. From 2’,3’-0-Thionocarbonate 40b. A solution of 40b (55 mg, 0.15 mmol) and 1,3-dimethyl-2-phenyl-l,3,2-diazaphospholidine (0.4 mL) in T H F (2 mL) was stirred for 24 h. The solvent was removed under reduced pressure, and the residue was purified by chromatography using CHC13-MeOH (50:l) as the eluent to obtain 24 mg (52%) of 41b. 2’,3’-Didehydro-2’,3’-dideoxyuridine (42). Compound 41a (0.38 g, 1.17 mmol) was deprotected with a 1M solution of tetra-n-butylammonium fluoride (1.5 mL, 1.5 mmol). The solvent was evaporated, and the residue was purified by chromatography on a silica gel column using CHC13-MeOH (20:l) to obtain 0.164 g (67%) of 42: mp 153-155 “C (MeOH) (lit.13mp 155-156 “C); NMR (DMs0-d~) 6 162.7 (C-4),150.4 (C-2), 140.3 (C-6), 134.6, 125.2 (C-2’ and C-3’),101.1 (C-5),89.1 (C-l’), 87.0 (C-4’),62.2(C-5’). 2’,3’-Didehydro-2’,3’-dideoxy-5-methyluridine (5). A solution of 41b (80 mg, 0.23 mmol) was converted to 5 by the procedure described above and purified by chromatography using CHC13-MeOH (301) as the eluent to obtain 41 mg (80%) of 5 as a colorless solid: mp 164 “C (lit.e mp 165-166 “C); ‘H NMR (DMSO-de) 6 1.90 (3 H, d, J = 1.17 Hz, 5-CH3), 3.62 (2 H, dd, J = 3.52,4.98 Hz, 5’-H), 4.75 (1H, m, 4’-H), 4.95 (1H, t, J = 4.98 Hz, 5’-OH, exchangeable), 5.85 (1H, br d, J = 6.2 Hz, 2’-H), 6.40 (1 H, br d, J = 6.2 Hz, 3’-H), 6.80 (1H, m, l’-H), 7.62 (1H, d, J = 1.17 Hz, 6-H), 11.25 (1 H, s, NH, exchangeable). X-ray Crystallography.

2’,3’-Dideoxyadenosine (10).

2225

atoms except the one bonded to the C-5’ atom were located in difference maps and refined. Final R values are Rw= 0.059, R, = 0.043 for the 873 observed data [ F > 3u(F)] and Rd = 0.043 for all 876 data. The fiial difference electron density map showed no features greater than 0.64 e A-3. Other programs used include data reduction program package DREAM.33 2‘,3‘-Didehydro-2’,3’-dideoxyadenosine (7). Crystals were obtained by slow evaporation of an acetone solution of 7. The crystal used had approximate dimensions of 0.1 X 0.25 X 0.55 mm. The space group is P212121,and the cell dimensions are Q = 10.035 (2) A, b = 13.866 (4) A, c = 7.828 (2) A, V = 1089.27 A3, Z = 4, M , = 233, Ddd = 1.42 g cm-’. Data were measured at room temperature on an Enraf-Nonius CAD4 diffractometer, using Ni-filtered Cu K a radiation. Unique data (1322) in the range 3.0” < 20 < 154” were measured. The structure was determined by direct methods, using the program MULTAN,32and refined with full-matrix least squares. All non-hydrogen atoms were refined with anisotropic thermal parameters. All hydrogen atoms were located in difference maps and were refined. Final R values are R, = 0.057, R, = 0.043 for the 1305 observed data [F > 3a(F)] and Rd = 0.043 for all 1322 data. The final difference electron density map showed no features greater than 0.42 e

Acknowledgment. This research was supported by Grants AI26055, AI25899, and CA34769 from the National Institutes of Health, US. Public Health Service. Supplementary Material Available: Anisotropic thermal parameters, hydrogen atom coordinates, bond lengths, and bond angles for 2’,3’-dideoxy- and 2’,3‘-didehydro-2’,3’-dideoxyadenosine and ORTEP stereodiagram showing 2’,3’-dideoxy- and 2’,3’-didehydro-2’,3’-dideoxyadenosine superimposed by least-squares fitting of the atoms of the bases (6 pages). Ordering information is given on any current masthead page.

Crystals were obtained by slow evaporation of an aqueous acetone solution of 2’,3’-dideoxyadenosine (10). A crystal with approximate dimensions of 0.2 X 0.2 X 0.3 mm was used for the data collection on a Nicolet P3 diffractometer using Ni-filtered Cu K a radiation (A = 1.5418 A). The crystal was cooled to 165 (2) K by means of a forced nitrogen stream. The space group is P212121,and the cell dimensions are Q = 9.959 (1)A,, b = 14.028 (1)A, c = 7.666 (1)A, V = 1070.95 A3, Z = 4, M, = 235, Dd = 1.46 g cm-’. Total data (876) with 4” < 20 < 115” were measured. The structure was determined by direct methods, using the program MULand refined by full-matrix least squares. All hydrogen

(32) Germain, G.; Main, P.; Woolfson, M. M. Acta Crystallogr., Sect. A: Cryst. Phys., Diffr., Theor. Gen. Crystallogr. 1971, A27, 368. (33) Blessing, R. H. Cryst. Reu. 1987, I , 3.

+

Asymmetric Total Synthesis of ( )-Negamycin and (-)-3-Epinegamycin via Enantioselective 1,3-Dipolar Cycloaddition Katsura Kasahara, Hideo Iida, and Chihiro Kibayashi* Tokyo College of Pharmacy, Horinouchi, Hachioji, Tokyo 192-03, Japan

Received September 22, 1988 Enantioselective total synthesis of (+)-negamycin [ (+)-11 and (-)-3-epinegamycin [ (-)-21 has been achieved by the introduction of asymmetry through 1,3-dipolarcycloadditionwith chiral nitrones modified with carbohydrates. For the model study, the trans-isoxazolidine-3-carboxylate(*)-6a, obtained by 1,3-dipolar cycloaddition of the nitrone 4 with N-(benzyloxycarbony1)allylamine (5), was converted into the hydrazide (+13 via six steps, catalytic hydrogenation of which resulted in deprotection and N-O bond cleavage at the same time, affording (f)-negamycin [(*)-l]. This sequence was next applied to the synthesis of (+)-negamycin. Thus the enantioselective 1,3-dipolar cycloaddition of nitrones modified with carbohydrates, such as D-and L-gulose, Dribose, and D-mannose derivatives, with 5 was investigated. Among these nitrones the gulosyl series proved to produce the best results. The trans adduct D-19a with 94% ee thus obtained by using N-D-gUlOSylnitrOneD-18 was converted into (+)-negamycin [(+)-11 by hydrolytic removal of the chiral auxiliary followed by a similar sequence for the synthesis of (&)-l. Similarly, the cis adduct D-19b with 94% ee obtained by cycloaddition with the D-gulosylnitrone D-18 was transformed into (-)-3-epinegamycin [ (-)-21. With synthetic ( + ) - l and (-)-2 in hand, antibacterial activity was examined.

(+)-Negamycin is a rare and unusual peptidelike antibiotic containing a hydrazide moiety, first isolated in 1970 by Umezawa et al. from Streptomyces purpeofuscus’ and characterized to be [2-[ (3R,5R)-3,6-diamino-5-hydroxy(1) Hamada, M.; Takeuchi, T.; Kondo, S.; Ikeda, Y.; Naganawa, H.; Maeda, K.; Okami, Y.; Umezawa, H. J. Antibiot. 1970, 23, 170.

0022-3263/89/1954-2225$01.50/0

hexanoyll-1-methylhydrazinolaceticacid [(+)-I] in 1971.2 (+)-Negamycin inhibits growth of Gram-negative and Gram-positive bacteria and is especially notable among antibiotics with regard to low toxicity and its activity (2) Kondo, S.; Shibahara, S.; Takahashi, S.; Maeda, K.; Umezawa, H.; . Ohno, M. J. Am. Chem. SOC.1971,93,6305.

0 1989 American Chemical Society

2226 J. Org. Chem., Vol. 54, No. 9, 1989

Kasahara et al. Scheme 11"

Scheme I (+I-'

(-1-2

u

v

5

4

O-NNBn

O-NxBn

C b Z NHH a H R

(?pa,

+

c_

R,#N C H zb ,

bL;'j4b,

R = C02Me

( ? ) - 7 8 , R = CH20H

+

R

=

C02Me

.7b R = CH20H

O-N'Bn C

b

z

N H s H H

R

eC

b z N H U 0 2 R H H ( ? ) . I O , R = Et

(z)-exo t s

(E).exo t s re attack

re attack R*

=

chiral auxiliary

(*).lZ

against Pseudomonas and multiple drug-resistant Gramnegative bacteria.l It has been shown to inhibit protein synthesis and to cause genetic m i ~ c o r d i n g . ~ The ~ significant antibiotic activity and the unique structural features of negamycin have stimulated considerable interest in the syntheses of this antibiotic in both racemic7 and optically actives forms as well as its a n a l o g u e ~ ~ and *~~J~ diastereomeric congeners such as epinegamycin in racemic form [(f)-2].7a9cFor natural (+)-negamycin the published syntheses have relied on the methods utilizing chiral poo1s8a,cand an enzymatically derived chiral building block.8b In this paper, we present the full details of our total synthesis of (+)-negamycin as well as (-)-3-epinegamycin by the introduction of asymmetry through 1,3dipolar cycloaddition with chiral nitrones."

H

H (+).I

(-1.2

Our synthetic strategy is shown in Scheme I. The pivotal step in this approach is enantioselective 1,3-dipolar cycloaddition of a nitrone modified with an appropriate chiral auxiliary to allow approach to the re face of a prochiral olefin in an exo manner. In this manner with E and 2 nitrones, two sets of new asymmetric centers adaptable to the 3R,5R and 3S,5R stereochemistry of (+)-land (-)-2, respectively, would be simultaneously created via the (3) Mizuno, S.; Nitta, K.; Umezawa, H. J. Antibiot. 1970, 23, 581. (4) Mizuno, S.; Nitta, K.; Umezawa, H. J. Antibiot. 1970, 23, 589. (5) Uehara, Y.; Kondo, S.; Umezawa, H.; Suzukake, K.; Hori, M. J. Antibiot. 1972, 25, 685. (6)Uehara, Y.; Hori, M.; Umezawa, H. Biochim. Biophys. Acta 1976, 442, 251. (7) (a) Streicher, W.; Reinshagen, H.; Turnowsky, F. J. Antibiot. 1978, 31, 725. (b) Pierdet, A,; NBdBlec, L.; Delaroff, V.; Allais, A. Tetrahedron 1980, 36, 1736. (c) Pasquet, G.; Boucherot, D.; Pilgrim, W.; Wright, B. Tetrahedron Lett. 1980, 21, 931. (8) (a) Shibahara, S.; Kondo, S.; Maeda, K.; Umezawa, H.; Ohno, M. J. Am. Chem. SOC. 1972,94,4353. (b) Wang, Y.-F.; Izawa, T.; Kobayashi, S.; Ohno, M. Ibid. 1982, 104, 6465. (c) Tanner, D.; Somfai, P. Tetrahedron Lett. 1988,29, 2373. (9) Streicher, W.; Reinshagen, H. Chem. Ber. 1975, 108, 813. (10) Kondo, S.; Iinuma, K.; Yoshida, K.; Yokose, K.; Ikeda, Y.; Shimazaki, M.; Umezawa, H. J. Antibiot. 1976, 29, 208. (11) A preliminary account of some of this work has appeared in: Iida, H.; Kasahara, K.; Kibayashi, C. J. Am. Chem. SOC.1986, 108, 4647.

(*)-I3

- -

(a) Toluene, reflux; (b) LiAlH4, Et20, 0 "C room temperature; (c) TsCl, EtN(i-Pr),, CH2C12,0 "C room temperature; (d) NaCN, Me,SO, 80 "C; (e) HCl, MeOH, room temperature; (f) 4% aqueous NaOH, MeOH, room temperature; (9) EtOCOCl, Et,N, toluene, 0 "C; (h) H2NN(Me)C02Bn,toluene, 0 "C room temperature; (i) H2 (3 atm), 10% Pd-C, MeOH-10% aqueous AcOH. (I

-

formation of trans- and cis-isoxazolidines 3. Results and Discussion (1) Synthesis of (&)-Negamycin. In order to evaluate the retrosynthesis approach as outlined in Scheme I, we initially undertook as a model experiment the synthesis of racemic negamycin [(&)-1]by using the achiral nitrone (Scheme 11). Thus nitrone 4 (5:3 E / Z equilibrium mixture), generated by condensation of methyl glyoxylate with N-benzylhydroxylamine, was subjected to cycloaddition with N-(benzy1oxycarbonyl)allylamine(5) to give a 3:2 mixture of trans (from the E nitrone) and cis (from the Z nitrone) adducts [(&)-6a and (&)-6b]. Since it was difficult to separate preparatively, this mixture of the products was converted by LiAlH4 reduction to the corresponding alcohols (f)-7a and (&)-7b separable by chromatography. The major crystalline isomer, the trans alcohol (f)-7a,I2 was subjected to tosylation followed by displacement (NaCN, Me2SO)to produce the nitrile (f)-9 in 57% overall yield from (f)-7a. The nitrile (&)-9was converted to the carboxylic acid (&)-11in 78% overall yield via ethanolysis by ethanolic hydrochloric acid and subsequent alkaline hydrolysis. Transformation to the hydrazide (&)-13was carried out by using the mixed anhydride method.13 Thus, (&)-11was converted to the ethyl car(12) A t this stage, it was not clear that the major isomer was the trans alcohol (f)-7a or cis alcohol (f)-7b, though in the 'H NMR spectra some appreciable differences were observed between these isomers (see Experimental Section). Actually, it was verified to be the trans isomer (&)-7a by its transformation into the final product, which was identified as (fbnegamycin not (*)-epinegamycin. (13) Vaughan, J. R., Jr.; Osato, R. L. J. Am. Chem. SOC. 1952, 74,676.

J. Org. Chem., Vol. 54, No. 9, 1989 2227

Synthesis of (+)-Negamycinand (-)-3-Epinegamycin

Scheme IVa

Scheme 111'

OH D.14

D-I5

21

D-I6

CbzNH,

D-17

D-18

0-198. R 1 = COzMe, R p =

H

D-19b R1 = H, R 2 = CQMe

CbzNH-

CbzNH-

Bn

H (3RSR_)-20a.R 1 = C0,Me:

Rp = H

(3RSR).6a, R 1 = C02Me: R p = H

(38,5R)-ZOb.R, = H: R 2 = COpMe

(35,5R).6b).R1 = H, R p = C02Me

CbzNH-

CbzNHy