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Biocatalytic transformation of 5-hydroxymethylfurfural into high-value derivatives: recent advances and future aspects Lei Hu, Aiyong He, Xiaoyan Liu, Jun Xia, Jiaxing Xu, Shouyong Zhou, and Jiming Xu ACS Sustainable Chem. Eng., Just Accepted Manuscript • DOI: 10.1021/ acssuschemeng.8b04356 • Publication Date (Web): 23 Oct 2018 Downloaded from http://pubs.acs.org on October 23, 2018
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ACS Sustainable Chemistry & Engineering
Biocatalytic transformation of 5-hydroxymethylfurfural into highvalue derivatives: recent advances and future aspects
Lei Hu,* Aiyong He, Xiaoyan Liu, Jun Xia, Jiaxing Xu,* Shouyong Zhou, and Jiming Xu
Jiangsu Key Laboratory for Biomass-based Energy and Enzyme Technology, Jiangsu Collaborative Innovation Center of Regional Modern Agriculture & Environmental Protection, School of Chemistry and Chemical Engineering, Huaiyin Normal University, No. 111, Changjiang West Road, Huaian 223300, China
*Corresponding Author:
[email protected] ,
[email protected] Telephone/Fax: +86-0517-83526983
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ABSTRACT: Catalytic transformation of biomass-derived 5-hydroxymethylfurfural (HMF)
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into a series of high-value derivatives, such as 2,5-diformylfuran, 5-hydroxymethyl-2-
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furancarboxylic acid, 5-formyl-2-furancarboxylic acid, 2,5-furandicarboxylic acid, 2,5-
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dihydroxymethylfuran, 5-alkanoyloxymethylfurfural, 5,5-bis(hydroxymethyl)furoin and 5-
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hydroxymethylfurfurylamine, is a very important research field in biorefinery process. For
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a long time, chemocatalytic pathways are the main transformation methods of HMF, and
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so, they have been widely studied in recent years. However, considering some
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unavoidable issues of chemocatalytic pathways, biocatalytic pathways with many
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advantages, such as higher selectivity, gentler condition, lower investment and
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environmental friendliness, should be a promising alternative, and unfortunately, they
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have not yet attracted enough attention until now. To better understand the current
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research status, this review primarily retrospects and describes the discovery and
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development of biocatalytic transformation of HMF, and then systematically summarizes
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and discusses the latest studies and advancements on the biocatalytic transformation of
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HMF through oxidation, reduction, esterification, carboligation and amination in the
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presence of the corresponding enzymes or whole-cells. Furthermore, this review also
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proposes a few possible research trends in the future studies, aiming at providing a few
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helpful and feasible references and supports for the biocatalytic transformation of HMF
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in much more economical and effective ways.
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KEYWORDS: Biomass, 5-Hydroxymethylfurfural, Biotransformation, Enzymes, Whole-
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cells, High-value derivatives 2
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ACS Sustainable Chemistry & Engineering
ABBREVIATIONS AA
acetic acid
FOA
furoic acid
AAD
aryl-alcohol dehydrogenase
GO
galactose oxidase
AAO
aryl-alcohol oxidase
HBA
4-hydroxybenzaldehyde
ADH
alcohol dehydrogenase
HFCA
5-hydroxymethyl-2-furancarboxylic acid
AF
2-acetylfuran
HLADH
horse liver alcohol dehydrogenase
ALD
aldehyde dehydrogenase
HMF
5-hydroxymethylfurfural
AMFCA
5-aminomethyl-2-furancarboxylic acid
HMFA
5-hydroxymethylfurfurylamine
AO
alcohol oxidase
HMFH
5-hydroxymethylfurfural oxidoreductase
AOMF
5-acetyloxymethylfurfural
HMFL
5-hydroxymethylfurfural levulinate
AOOMF
5-alkanoyloxymethylfurfural
HMFO
5-hydroxymethylfurfural oxidase
ARD
aldehyde reductase
HOMF
5-hexanoyloxymethylfurfural
BAL
benzaldehyde Lyase
IPA
isopropylamine
BHMF
5,5-bis(hydroxymethyl)furoin
LA
levulinic acid
CAL-B
Candida antarctica lipase B
LCA
laccase
CPME
cyclopentyl methyl ether
MB
2-methyl-2-butanol
CPO
chloroperoxidase
MBA
methylbenzylamine
CTL
catalase
MM
minimal medium
DA
dodecanoic acid
MnP
manganese peroxidase
DAMF
2,5-diaminomethylfuran
MOMF
5-methoxycarbonyloxymethylfurfural
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DCAD
dicarboxylic acid decarboxylase
MSM
mineral salt medium
DES
deep eutectic solvent
MTHF
2-methyltetrahydrofuran
DFF
2,5-diformylfuran
PAMO
phenylacetone monooxygenase
DHMF
2,5-dihydroxymethylfuran
PAO
periplasmic aldehyde oxidase
DMC
dimethylcarbonate
SA
syringaldehyde
DOMF
5-dodecanoyloxymethylfurfural
SCM
synthetic complete medium
EA
ethyl acetate
TAM
transaminase
EH
ethyl hexanoate
TCA
tricarboxylic acid
FA
formic acid
TEMPO
2,2,6,6-tetramethylpiperidine-1-oxyl
FDCA
2,5-furandicarboxylic acid
TPA
terephthalic acid
FEA
1-furan-2-ethylamine
UPO
unspecific peroxygenase
FF
furfural
VA
vanillin
FFA
furfurylamine
XDH
xanthine dehydrogenase
FFCA
5-formyl-2-furancarboxylic acid
XO
xanthine oxidase
INTRODUCTION
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In recent years, increasing development of global economy and rising emission of
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greenhouse gases have greatly stimulated the search for renewable resources to reduce the
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excessive reliance on nonrenewable fossil resources.1-5 Among various renewable resources
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in the nature, biomass is the most abundant carbonaceous feedstock,6-10 and it can be used
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to produce a wide variety of chemicals, fuels and materials in more sustainable ways. To
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make the utmost of biomass, biorefinery, which was firstly proposed by Bungay in 1982,11 4
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is considered to be a very effective approach.12-16 In biorefinery process, 5-
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hydroxymethylfurfural (HMF), which is produced by the dehydration of biomass-derived
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carbohydrates,17-32 such as glucose, fructose, sucrose, maltose, cellobiose, inulin, starch and
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cellulose, is listed as one of the “Top 10+4” value-added bio-based compounds by the
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United States Department of Energy.33-35 Due to the presence of three functional groups,
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including an aldehyde group, a hydroxyl group and a furan ring, it shows a very strong
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reactivity and can be further transformed into a lot of high-value derivatives (Figure 1), such
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as 2,5-diformylfuran (DFF),36-45 5-hydroxymethyl-2-furancarboxylic acid (HFCA),46 5-formyl-
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2-furancarboxylic
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dihydroxymethylfuran
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bis(hydroxymethyl)furoin (BHMF)72-76 and 5-hydroxymethylfurfurylamine (HMFA).77
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acid
(FFCA),47
(DHMF),57-66
2,5-furandicarboxylic
acid
5-alkanoyloxymethylfurfural
(FDCA),48-56
2,5-
(AOOMF),67-71
5,5-
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For a long time, chemocatalytic pathways have been the mainstream methods for the
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transformation of HMF.78-86 Although many important findings and breakthroughs were
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achieved, they still face a few unavoidable issues. On the one hand, chemocatalytic
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pathways generally employ metals, especially precious metals, such as gold, palladium,
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platinum, ruthenium, rhodium, rhenium and iridium, as catalysts, they are very expensive
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and then lack sufficient economical superiority.87 Besides, the selectivities of some metals
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are not very ideal in specific reactions, leading to the formation of various byproducts.88 On
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the other hand, chemocatalytic pathways usually require harsh reaction conditions, such as
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high temperatures, high pressures and corrosive reactants, to obtain the satisfactory 5
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results.89 In such situations, the special equipments bearing harsh reaction conditions can
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largely increase the initial investment. Additionally, the majority of chemocatalytic
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pathways also need organic solvents as reaction media, which are environmentally-
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unfriendly in the viewpoint of green chemistry.90 In light of the above-mentioned issues,
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biocatalytic pathways with many advantages, such as higher selectivity, gentler condition,
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lower investment and environmental friendliness, should be a promising alternative,87-91
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but unfortunately, they have not yet attracted enough attention until now. Considering the
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importance and potential of biocatalytic pathways, their current research status will be
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comprehensively reviewed in this work. First of all, the discovery and development of
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biocatalytic pathways for the transformation of HMF are retrospected and described. Then,
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the latest studies and advancements on biocatalytic pathways for the transformation of
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HMF through oxidation, reduction, esterification, carboligation and amination in the
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presence of the corresponding enzymes or whole-cells are systematically summarized and
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discussed. Moreover, some possible research trends are proposed to supply a few helpful
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and feasible references and supports for the future biocatalytic transformation of HMF.
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DISCOVERY AND DEVELOPMENT OF BIOTRANSFORMATION OF HMF
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As is known to all, pretreatment is an essential and crucial step to overcome the
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inherent recalcitrance of biomass for its effective depolymerization and conversion into
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various valuable products by microbial fermentation and other reactions.92-94 Owing to high
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efficiencies and low costs, acid-catalyzed and thermal-mediated hydrolysis are two of the
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most widely applied pretreatment methods.95-98 However, in addition to generating the 6
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desired fermentable sugars during these processes, numerous undesired compounds,
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including phenolic compounds, such as vanillin (VA), syringaldehyde (SA) and 4-
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hydroxybenzaldehyde (HBA), furan compounds, such as HMF and furfural (FF), and organic
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acids, such as formic acid (FA), acetic acid (AA) and levulinic acid (LA), are also formed
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because of severe conditions.99-102 More unfortunately, these compounds have strong
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suppression to microbial growth, which will lead to low product concentration and
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productivity.103 Among them, HMF, possessing a relatively higher abundance in
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hydrolysates, is regarded as the most potent inhibitor,104-107 because it can violently attack
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microorganisms, and then, interfere their metabolic processes by damaging cell wall and
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membrane, reducing enzymatic and biological activity, breaking down deoxyribonucleic
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acid and inhibiting ribonucleic acid and protein synthesis,103 which are very similar with the
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inhibition of FF. To remove HMF and facilitate microbial fermentation, additional
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remediation treatments or detoxification procedures are definitely required. In the past few
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decades, a lot of physical and chemical pathways, such as water washing, over-liming,
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activated charcoal or ion exchange adsorption, organic solvent extraction, ammonia
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neutralization and alkaline precipitation, have been widely investigated and employed.108-
88
110
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commercialization due to their high processing costs that are caused by the excessive
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consumption of fresh water and reagents, the massive generation of waste water and
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residues and the substantial loss of fermentable sugars.107 In this context, if HMF can be in
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situ metabolized by microorganisms via the biotransformation or biodetoxification
However, these pathways are hardly acceptable from the viewpoint of
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processes, some momentous improvements in microbial fermentation will be readily
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achieved.
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Gratifyingly, Boopathy et al. in 1993 found for the first time that several enteric
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bacterial strains, such as Citrobacter, Edwardsiella, Escherichia, Enterobacter, Klebsiella and
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Proteus, could not only grow in the presence of HMF but also degrade approximately 95%
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HMF in 24 h, suggesting that they displayed a good ability to metabolize HMF,111 which was
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evidently proved by ultraviolet-visible spectroscopy (Figure 2). Following this study, other
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types of bacteria,112-124 yeasts125-132 and fungi,133-136 which can metabolize HMF into the less
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toxic products, such as DFF, HFCA, FFCA, FDCA and DHMF, or fully degrade it, have been
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gradually discovered in recent years (Table 1). The corresponding experimental results
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indicated that some special oxidoreductases and decarboxylases, such as the generically
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reported 5-hydroxymethylfurfural oxidoreductase (HMFH),137-139 5-hydroxymethylfurfural
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oxidase (HMFO),140-144 chloroperoxidase (CPO),145 aryl-alcohol oxidase (AAO),146-148
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unspecific peroxygenase (UPO),146-148 galactose oxidase (GO),147-149 periplasmic aldehyde
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oxidase (PAO),148-150 laccase (LCA),151-153 alcohol oxidase (AO),151 phenylacetone
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monooxygenase (PAMO),154 xanthine oxidase (XO),151 catalase (CTL),151 manganese
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peroxidase (MnP),155 aryl-alcohol dehydrogenase (AAD),135 xanthine dehydrogenase
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(XDH),149 aldehyde dehydrogenase (ALD),137 alcohol dehydrogenase (ADH),156-159 aldehyde
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reductase (ARD)160-163 and dicarboxylic acid decarboxylase (DCAD),122 were confirmed to
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play an important role in the metabolism of HMF (Table 1). Moreover, it should be
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emphatically noted that genera and enzymes may be different, but the metabolic pathways 8
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of HMF in the corresponding microorganisms were verified to be very similar by Zhang et
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al.,114 Liu et al.,104 Ran et al.,133 Wang et al.134 and Koopman et al.137 As shown in Figure 3,
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HMF is generally reduced into DHMF under aerobic conditions, and then, reoxidized into
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HMF at a much lower and harmless concentration, which does not affect the microbial
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growth and metabolism. Subsequently, HMF is oxidized into FDCA via FFCA over various
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oxidases or dehydrogenases, and then, decarboxylated into furoic acid (FOA) via a
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decarbonylation reaction. Finally, FOA joins the metabolism of FF, and through six steps, it
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is converted into 2-oxo-glutaric acid, which enters the cycle of tricarboxylic acid (TCA) to
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accomplish the entire metabolic process. However, under anaerobic conditions, HMF is
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merely reduced into DHMF and it can not be reoxidized into FDCA, meaning that the
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presence of oxygen is the prerequisite for the thorough metabolism of HMF.
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126 127 128 BIOTRANSFORMATION OF HMF INTO HIGH-VALUE DERIVATIVES 129 Through Oxidation. Biocatalytic oxidation is an attractive and important method for 130 the biotransformation of HMF. By means of different enzymes or whole-cells, various high- 131 value derivatives, such as DFF, HFCA, FFCA and FDCA, can be selectively produced according 132 to the position and degree of HMF oxidation. In the following section, we will summarize 133 their respective studies and advancements in a comprehensive manner (Table 2), and we 134 also discuss the effects of related reaction parameters, including catalysts, oxidants, buffers, 9 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 135 cofactors and cosubstrates, on the biocatalytic oxidation of HMF. 136 137 DFF. DFF contains two symmetrical aldehyde groups, and so, it is a very crucial 138 precursor in the synthesis of pharmaceuticals, fungicides and functional polymers.164-167 The 139 biocatalytic oxidation of HMF into DFF was firstly reported in 1997 by Sheldon and co- 140 workers,145 where CPO, an extracellular enzyme that was isolated from Caldariomyces 141 fumago, was used as a catalyst. In the presence of hydrogen peroxide (H2O2) that served as 142 an oxidant, the yield and selectivity of DFF could be achieved to 53% and 59% in citrate 143 buffer at room temperature (RT) for 2.5 h, respectively. However, it should be noted that 144 HMF was hard to be completely oxidized by CPO, and its maximum conversion was only 92% 145 under the above reaction conditions. Additionally, during the CPO-catalyzed oxidation of 146 HMF, the formed oxoiron(V)porphyrin intermediate of CPO could competitively abstract 147 hydrogen from the hydroxy and aldehyde moieties of HMF, which would lead to the 148 generation of other byproducts, such as HFCA and FFCA, via the further direct oxygen 149 transfer. Hence, CPO is not very applicable for the biocatalytic oxidation of HMF into the 150 sole product. 151 Following this study, Li and co-workers in 2015 also investigated the biocatalytic 152 oxidation of HMF by using air as an oxidant.151 Fortunately, three AOs were found to have 153 the ability to promote the formation of DFF as the sole product with the assistance of CTL. 154 Note that CTL could convert the produced H2O2 into H2O and O2, which would remove the 155 harmful effect of H2O2 on AOs. More interestingly, the formed O2 could again act as a 10 ACS Paragon Plus Environment Page 10 of 105 Page 11 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 156 substrate of AOs (Figure 4). Among the tested AOs, AO from Candida boidinii displayed the 157 highest activity for the biocatalytic oxidation of HMF, leading to 41% yield of DFF in 158 phosphate buffer at 25 C for 72 h. Furthermore, compared with AO, GO from Dactylium 159 dendroides was a better catalyst for the synthesis of DFF from HMF when the reaction 160 conditions were carefully optimized. Due to the strong activation effect of HRP towards GO 161 and the excellent removal effect of CTL towards H2O2, the introduction of HRP and CTL could 162 significantly increase the activity of GO, and then improve the yield of DFF,151 which was in 163 accordance with the results of Carnell and co-workers.148 In addition, it should be 164 particularly pointed out that the buffer types could also influence the activity of GO in the 165 presence of HRP and CTL. For example, when the biocatalytic oxidation of HMF was 166 performed in deionized water, the yield of DFF was 56% at 25 C for 72 h. However, under 167 the same reaction conditions, DFF yield was drastically decreased to 28% in phosphate 168 buffer, this might be attributed to the formation of copper phosphate precipitate (Cu3(PO4)2) 169 when the copper-dependent GO was incubated in phosphate buffer, thus resulting in a 170 lower activity. Although GO performed poorly in phosphate buffer, Carnell and co-workers 171 found that the M3-5 variant of GO performed better, even at a much higher substrate 172 concentration.148 Besides, they also found that when the pH value of phosphate buffer was 173 6.5, the M3-5 variant of GO gave 77% yield of DFF at 37 C for 1 h. If the pH value was turned 174 into 7.5, DFF yield would be achieved to 88% under the same reaction conditions, clearly 175 indicating that the pH values of buffers were another crucial factor to influence the activity 176 of GO. Based on the above findings, after careful optimization of reaction conditions, the 11 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 177 178 yield of DFF could be further improved to 91%148 and 92%.151 179 HFCA. HFCA is the oxidation product of aldehyde group in HMF, it is a promising 180 versatile intermediate for the preparation of polyesters.168 Moreover, it is reported that 181 HFCA is also an antitumor agent169 as well as an interleukin inhibitor.170 To the best of our 182 knowledge, there are only a few studies on the biocatalytic synthesis of HFCA from HMF. In 183 2013, Krystof et al. developed an interesting reaction system for the oxidation of HMF with 184 the stepwise addition of H2O2 via the Baeyer-Villiger-type reaction mechanism (Figure 5), in 185 which the commercially available immobilized lipase B from Candida antarctica (CALB) and 186 ethyl acetate (EtOAc) or ethyl butyrate (EtOBu) were used as a catalyst and an acyl donor, 187 respectively, and the in situ generated peracid would act as a direct oxidant.171 The results 188 demonstrated that this biocatalytic system could successfully lead to the formation of HFCA 189 with the yield of 76% in t-butanol (tBuOH) at 40 C for 24 h, and the usage of different acyl 190 donors did not remarkably change the yield and distribution of products,171 suggesting that 191 the lipase-mediated and peracid-assisted oxidation of HMF was highly favourable for the 192 synthesis of challenging “semi-oxidized” products, such as HFCA. Furthermore, it is worth 193 noting that the over-oxidation products, such as FFCA and FDCA, were not observed, 194 however, more than 20% esters of HFCA were simultaneously formed as the byproducts in 195 the above process.171 In order to further improve the yield and selectivity of HFCA, Li and 196 co-workers in 2015 employed XO, a molybdenum-dependent enzyme from Escherichia coli, 197 as a catalyst for the biocatalytic oxidation of HMF,151 affording 94% yield and 99% selectivity 12 ACS Paragon Plus Environment Page 12 of 105 Page 13 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 198 of HFCA in the presence of phosphate buffer and air at 37 C for 7 h, this remarkable 199 reaction rate might be related to the formation of highly active superoxide anion radicals 200 by XO.172 Compared with the lipase-mediated and peracid-assisted oxidation of HMF, the 201 XO-catalyzed process showed many advantages: (1) much higher product yield and 202 selectivity; (2) much shorter reaction time; (3) using air as the oxidant; (4) avoiding the 203 addition of H2O2, the generation of peracid and the usage of organic solvents. More recently, 204 Li and co-workers also designed an effectively coupled reaction system (Figure 6), in which 205 the biocatalytic oxidation of HMF into HFCA over horse liver alcohol dehydrogenase (HLADH) 206 was well compatible with the enzymatic regeneration of NAD(P)+ over hemoglobin (Hb) and 207 H2O2.159 Specifically, under the catalytic action of HLADH, HMF was firstly oxidized into HFCA 208 by NAD(P)+ in phosphate buffer, in which the oxidant NAD(P)+ was reduced into NAD(P)H. 209 Subsequently, NAD(P)H was reoxidized into NAD(P)+ by Hb and H2O2, and then, the 210 regenerated NAD(P)+ would again act as an oxidant for the oxidation of HMF into HFCA. By 211 optimizing reaction conditions, the conversion of HMF and the yield of HFCA could be 212 achieved to 100% and 81% at 30 C for 60 h,159 respectively. As far as we know, this is the 213 first time that Hb-mediated regeneration route of NAD(P)+ was developed and applied for 214 the HLADH-catalyzed oxidation of HMF into HFCA, which may open up a novel opportunity 215 for the biotransformation of HMF. Following this study, another novel coupled reaction 216 system, consisting of PAMO and phosphite dehydrogenase (PTDH), was also developed in 217 2017 for the biocatalytic oxidation of HMF.154 After 16 h at 25 C in the presence of 218 phosphate buffer, phosphite and O2, FFCA was detected as the major product with the 13 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 219 almost complete conversion of HMF. 220 221 222 In contrast to the isolated enzymes, the whole-cells should be more preferable for the 223 biotransformation of HMF in theory, because they are not only inexpensive and stable but 224 also do not require complex procedures that are necessary for the separation and 225 purification of enzymes.88 However, the whole-cell-catalyzed biotransformation of HMF 226 remains challenging, because HMF is a well-known inhibitor and toxic compound to 227 microorganisms.124 Additionally, many side reactions may easily occur in the whole-cell- 228 catalyzed biotransformation of HMF, which is due to the existence of various enzymes in 229 microbial cells.123 Hence, screening for a highly selective microbial strain with a high 230 tolerance to HMF is crucial for the biotransformation of HMF into high-value derivatives. In 231 this respect, the biocatalytic oxidation of HMF into HFCA is no exception. As early as 2004, 232 Mitsukura et al. surveyed three kinds of bacteria, including Acetobacter rancens IFO3297, 233 Serratia liquefaciens LF14 and Acetobacter pasteurianus IFO13753, the results 234 demonstrated that the first two strains showed a very strong aldehyde-oxidizing activity 235 without hydroxy-oxidizing activity.124 Hence, when HMF was used as a substrate, the 236 aldehyde group of HMF was selectively oxidized and the oxidation of hydroxy group of HMF 237 was not observed. Furthermore, it is noteworthy that compared with A. rancens IFO3297, 238 S. liquefaciens LF14 was more active for the oxidation of HMF, gaving 97% yield of HFCA at 239 20 C for 26 h.124 Inspired by this encouraging study, Zhang et al. in 2017 isolated a new 14 ACS Paragon Plus Environment Page 14 of 105 Page 15 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 240 bacterial strain Comamonas testosteroni SC1588 from soil samples, which not only showed 241 a high tolerance to HMF, but also displayed a good selectivity to the aldehyde group of 242 HMF.123 Interestingly, its catalytic activity was largely influenced by the cultivation status of 243 cells. Compared with the growing cells, the resting cells were observed to be much more 244 effective for the synthesis of HFCA,123 this might be ascribed to that the oxidized cofactors, 245 such as NAD(P)+, could be efficiently regenerated in the absence of nutrients (especially 246 carbon sources), thus facilitating the formation of the oxidized product, which is in 247 agreement with the metabolic pathways of HMF in Figure 3. In addition, it should be 248 specifically pointed out that the acidity of HFCA and the pH value of reaction system also 249 had a large effect on the catalytic activity of C. testosteroni SC1588.123 Based on its 250 physiological and biochemical properties, the combination of histidine addition and pH 251 tuning was found to be an available approach, which could not only significantly enhance 252 the tolerance to HMF, but also further improve the yield of HFCA. With the addition of 20 253 mM histidine into phosphate buffer, HMF-tolerance level and HFCA yield could be up to 180 254 mM and 98% when the pH value was adjusted to 7.0,123 respectively. More importantly, C. 255 testosteroni SC1588 could not use glucose and xylose as carbon sources, thus avoiding the 256 loss of sugars during the biotransformation and biodetoxification of microorganisms. 257 FFCA. FFCA is another product in the partial oxidation of HMF, and it bears an aldehyde 258 group and a carboxyl group, which make it attractive for the further applications in the 259 preparation of surfactants and resins.173 However, FFCA is challenging to be selectively 260 synthesized from HMF, which is due to its highly oxidized and yet uncompleted state. 15 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 261 Fortunately, an organocatalytic-enzymatic method was developed in 2013 by Dominguez 262 de Maria and co-workers,171 in which 2,2,6,6-tetramethylpiperidine-1-oxyl (TEMPO) and 263 CALB were applied as catalysts for the primary oxidation of HMF into DFF and the further 264 oxidation of DFF into FFCA, respectively. After 24 h at 40 C in tBuOH, 52% yield of FFCA 265 could be obtained.171 Enlightened by this study, Qin et al. reported a similar method, the 266 main difference was that the oxidation of HMF were performed in the presence of acetate 267 buffer and air over the combination of TEMPO and LCA.151 Analogously, DFF was firstly 268 formed as the dominant intermediate at the initial stage, and then, it was further 269 transformed into FFCA. Moreover, the results demonstrated that among three tested LCAs, 270 LCA from P. conchatus provided the highest yield of FFCA with 82% at 25 C for 96 h.151 271 In the subsequent studies, to circumvent the usage of TEMPO, the specific enzymes 272 were explored for the oxidation of HMF into FFCA. For instance, AAO is a secreted 273 flavoenzyme, which is generally present in several basidiomycetes for the degradation of 274 lignin.174 Excitingly, Carro et al. in 2014 found for the first time that AAO possessed a strong 275 ability to selectively oxidize HMF into FFCA via DFF. When AAO from Pleurotus eryngii was 276 employed as a catalyst, the yield of FFCA could be up to 98% in a shorter time of 4 h at 25 277 C,146 which was an important scientific finding, expanding our knowledge about the 278 substrates of AAO. However, it should be noted that AAO was not able to further oxidize 279 the aldehyde group of FFCA. In the same year, HMFO from Methylovorus sp. MP688, which 280 is a flavin adenine dinucleotide-containing oxidase and belongs to the glucose-methanol- 281 choline-type flavoprotein oxidase family, was also found to be very effective for the 16 ACS Paragon Plus Environment Page 16 of 105 Page 17 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 282 oxidation of HMF. After 5 h at 25 C, 92% yield of FFCA was obtained in phosphate buffer.140 283 More gratifyingly, the activity of HMFO was not restricted to HMF, and it was still active on 284 FF and many aromatic and aliphatic primary alcohols and aldehydes. In addition, HMFO 285 showed excellent thermal stability and catalytic stability over a wide range of pH. Based on 286 these results, HMFO is considered as a suitable and robust catalyst for the industrial 287 applications. Subsequently, in order to get more insights into the catalytic performance of 288 HMFO, its crystal structure was solved by Mattevi and co-workers in 2015,142 indicating that 289 H467 was the active site (Figure 7), which provided an essential hydrogen-bonding point 290 that could activate substrates and position their α-carbon in direct and proper contact with 291 the flavin. Besides, the mutational V367R and W466F were also identified as the sites for 292 further improving the activities on the aldehyde- and carboxyl-containing substrates (Figure 293 8). All these findings will guide more systematic and thorough investigations on the catalytic 294 performance of HMFO. 295 296 297 FDCA. FDCA, the complete oxidation product of HMF, has two symmetrical carboxyl 298 groups, so it is thought to be an environmental-friendly substitute for the replacement of 299 terephthalic acid (TPA),175-177 which can be extensively applied for the production of various 300 polyesters.178-194 In addition, FDCA can also be used as a renewable biochemical building 301 block to synthesize a series of medicines,122 polyamides195-197 and coordination 302 compounds.198 In general, the oxidation of HMF into FDCA can proceed by two routes 17 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 303 (Figure 9). In the first route (Route A), the aldehyde group of HMF is firstly oxidized into the 304 carboxylic group, thus yielding HFCA, which is further oxidized into FDCA via FFCA. In the 305 second route (Route B), the hydroxy group of HMF is firstly oxidized into the aldehyde group, 306 thus yielding DFF, which is further oxidized into FDCA via FFCA. From the above routes, it 307 can be seen that the synthesis of FDCA from HMF involves three consecutive steps. Because 308 most enzymes are limited to either aldehyde oxidation or hydroxy oxidation, hence, the 309 mixed enzymes are usually employed as catalysts for the biocatalytic oxidation of HMF into 310 FDCA. For instance, Li and co-workers in 2015 designed a tandem oxidation system, in which 311 HMF was ultimately transformed into FDCA by the combination of GO and CALB via a 312 sequential stepwise process in the presence of deionized water and tBuOH (Figure 10), 313 resulting in 88% product yield,151 which was approximately equal to that by the combination 314 of TEMPO and CALB.171 In the same year, a similar oxidation system consisting of M3-5 315 variant of GO and PAO was developed by Carnell and co-workers,149 in which M3-5 variant 316 of GO was primarily added into the reaction system prior to the addition of PAO. After 8 h 317 at 37 C, HMF could be completely transformed, and more gratifyingly, FDCA as the only 318 oxidation product was produced in nearly quantitative yield. Following these studies, other 319 multi-enzyme reaction systems, such as AAO/UPO,146 AO/AAO/UPO,136 GO/AAO/UPO147 320 and GO/PAO/CTL/HRP,148 have also been investigated for the complete oxidation of HMF 321 (or 5-methoxymethylfurfural, MMF) in recent years. As expected, they displayed excellent 322 catalytic activities, leading to more than 80% yield of FDCA. In contrast to multi-enzyme 323 reaction systems, the complete oxidation of HMF into FDCA by a single enzyme is very 18 ACS Paragon Plus Environment Page 18 of 105 Page 19 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 324 challenging. In this respect, Fraaije and co-workers reported a ground-breaking work, they 325 found that HMFO was not restricted to aldehyde oxidation or hydroxyl oxidation, and it had 326 a catalytic activity to both aldehyde and hydroxyl oxidations.141 Therefore, when HMFO was 327 used as a single enzyme for the complete oxidation of HMF, FDCA was successfully formed. 328 By optimizing various reaction parameters, such as buffer, pH value, reaction temperature, 329 reaction time, substrate concentration and enzyme amount, FDCA yield could be achieved 330 to 95%,141 which was a very satisfactory result. Additionally, it should be particularly pointed 331 out that FDCA can be synthesized by two routes in theory, however, Route B in Figure 9 was 332 proved to be the preferred and main pathway, and Route A was hardly or not involved when 333 HMFO was adopted for the complete oxidation of HMF. By means of reaction kinetics, 334 isotope labeling and atmospheric pressure chemical ionization mass spectrometry, the 335 reasons for this interesting phenomenon should be due to that HMFO was a true alcohol 336 oxidase and its actual substrate was the hydrated aldehyde (gem-diol).141 Specifically, the 337 aldehyde group of HMF was not directly oxidized, but the hydroxyl group of HMF and the 338 hydrated form (gem-diol) of DFF could be oxidized by HMFO. Moreover, the hydrated 339 degree of aldehyde group was strongly dependent on the substituents on the furan ring. 340 When an electron-withdrawing substituent (such as formyl) was present, the aldehyde 341 group was more easily hydrated. However, when the substituent was a carboxylic acid, the 342 hydrated degree of aldehyde group would be reduced. Based on these results, during the 343 complete oxidation of HMF into FDCA over HMFO, the reaction rates for the formation of 344 DFF and FDCA were relatively slow and the reaction rate for the formation of FFCA was 19 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 345 346 347 more faster in route B (Figure 9). 348 Apart from the enzymatic approaches, the whole-cell-catalyzed approaches have also 349 gained a series of interesting results in the complete oxidation of HMF into FDCA. For 350 example, Yang and Huang in 2016120 and 2017121 isolated six bacterial strains from soil 351 samples. After screening and acclimatizing, five strains (H-1, H-2, H-3, G-1 and G-2) were 352 found to be capable of growing in the presence of HMF as the sole carbon source. Among 353 them, H-2 and G-2, which were identified as Burkholderia cepacia and Methylobacterium 354 radiotolerans by 16S rDNA gene sequencing method, respectively, could commendably 355 biotransform HMF into FDCA.120 In addition, because the produced FDCA could be further 356 consumed by M. radiotolerans G-2, so its yield with 42% was lower than 51% that was 357 obtained by B. cepacia H-2.121 However, both two results were not ideal. To further improve 358 the yield of FDCA, some metabolic engineering techniques were applied for the complete 359 oxidation of HMF through the whole-cell-catalyzed approaches. For instance, Raoultella 360 ornithinolytica BF60, containing aldR that encodes ARD, dcaD that encodes DCAD and aldH 361 that encodes ALD, was isolated by Hossain et al. in 2017.122 When the wild-type strain was 362 used for the complete oxidation of HMF, the yield of FDCA was only 51% under the optimal 363 conditions. When aldR and dcaD were mutated by an intron gene insertional mutagenesis 364 system to prevent the formation of DHMF and the degradation of FDCA (Figure 11), 365 respectively, FDCA yield could be significantly increased to 72%.122 If aldH was 20 ACS Paragon Plus Environment Page 20 of 105 Page 21 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 366 overexpressed in the above mutant to promote the formation of FDCA (Figure 11), its yield 367 would be further improved to 89%.122 In addition to mutation and overexpression, 368 transgenosis was also proved to be a practicable and valid method by Koopman et al. in 369 2010119 and Yuan et al. in 2018.143 To be specific, by means of standard molecular cloning 370 procedures, two genes, one encoding HMFH from Cupriavidus basilensis HMF14137 and 371 another encoding HMFO from Methylovorus sp. MP688,140 were introduced into 372 Pseudomonas putida S12 (possessing aldH) and R. ornithinolytica BF60, respectively, and 373 the results indicated that the recombinational strains exhibited much better catalytic 374 performance for the complete oxidation of HMF, leading to 97% and 94% yields of FDCA at 375 30 C for 144 h119 and 120 h,143 respectively, which is very conductive to the high-efficiency 376 and industrial production of FDCA. More interestingly, FDCA was found to have a small 377 solubility (0.4 g/L) at low pH (0.5) and a high solubility (18 g/L) in tetrahydrofuran. Hence, 378 when FDCA was formed, it could be separated and recovered from the reaction mixture by 379 the combination of acid precipitation and tetrahydrofuran extraction. After measuring by 380 gas chromatography mass spectrometry, elemental analysis and nuclear magnetic 381 resonance, the purity of FDCA was proved to be up to more than 99%.119 382 383 Through Reduction. In the biotransformation of HMF, biocatalytic reduction is also a 384 typical method for the production of high-value derivatives. In 1993, Boopathy et al.111 for 385 the first time found that HMF could be reduced by many types of bacteria into its alcohol 386 with a maximum absorbance of 222 nm (Figure 2). Unfortunately, it was not authentically 21 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 387 studied and analyzed due to the lack of internal control and commercial source at that time. 388 Until 2004, Liu et al. isolated and purified the reduction product of HMF from the yeast- 389 based conversion mixtures, and identified it as DHMF, which is a highly attractive platform 390 compound with wide applications in the synthesis of ethers,199-201 ketones202 and 391 polymers,203-213 with a molecular weight of 128 and a composition of C6H8O3 by means of 392 ultraviolet spectrum, high performance liquid chromatography, gas chromatographic mass 393 spectrometry and nuclear magnetic resonance spectrum,125 which largely accelerated the 394 studies on the biocatalytic reduction of HMF. Furthermore, it can be seen from the above 395 results that the whole-cell-catalyzed approaches showed many advantages and 396 tremendous potentials in the biotransformation of HMF, hence, they have been widely used 397 for the production of DHMF in recent years (Table 3). 398 399 For instance, Liu et al. in 2005 reported two strains of yeasts (Saccharomyces cerevisiae 400 307-12H60 and 307-12H120) for the reduction of HMF. Surprisingly, they could not only 401 tolerate 60 mM HMF but also reduce it into DHMF with the yield of 100% at 30 C for 48 402 h.126 Subsequently, Li et al. in 2017 isolated a new yeast strain (Meyerozyma guilliermondi 403 SC1103), which was proved to be more active for the reduction of HMF.132 Using 100 mM 404 HMF, 86% DHMF yield could be achieved at 35 C for 12 h. On this basis, the authors in 2018 405 further improved the tolerance and catalytic activity of M. guilliermondi SC1103 by 406 acclimatization and immobilization on calcium alginate.214 By using the modified strain, 86% 407 and 82% yields of DHMF were obtained when the concentration of HMF was up to 200 mM 22 ACS Paragon Plus Environment Page 22 of 105 Page 23 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 408 and 300 mM at 35 C for 7 h and 24 h, respectively. More satisfactorily, He et al. found that 409 E. coli CCZU-K14, a recombinational strain with high activity of carbonyl reductase,215 also 410 exhibited an amazing performance.118 Under the optimum reaction conditions, its tolerance 411 to HMF could be achieved to 400 mM, which did not seriously suppress the reduction of 412 HMF (Figure 12). After 72 h at 30 C, a moderate yield of DHMF with 70% could still be 413 obtained. If the concentration of HMF was decreased to 100 mM and 200 mM, DHMF yield 414 could even be as high as 100% and 91% in 24 h and 72 h, respectively, obviously 415 demonstrating excellent prospect of industrialization. Additionally, it is worth noting that 416 NAD(P)H as a cofactor was very important for the reduction of HMF into DHMF (Figure 3), 417 and its effective regeneration was strongly associated with the types of cosubstrates and 418 their concentrations. Among various available cosubstrates, glucose is very cheap and 419 abundant, so it with the appropriate concentration was commonly used to promote the 420 reduction of HMF into DHMF via the whole-cell-catalyzed approaches.118, 125, 132, 214 421 422 Through Other Reactions. In addition to oxidation and reduction reactions, other 423 reactions, such as (trans)esterification, carboligation and amination, have been gradually 424 employed for the biotransformation of HMF into the corresponding high-value derivatives 425 in recent years (Table 4). 426 427 AOOMF. AOOMF is a new-type ester, which is well known for its diverse applications 428 as fuel additives,67 surfactants,68 plasticizers,88 fungicides216 and monomers,217 and it is 23 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 429 generally prepared by the chemocatalytic pathways via the (trans)esterification of HMF 430 with various acyl donors, including carboxylic acids, natural oils, alkyl esters and carbonates, 431 in the presence of homogeneous and heterogeneous catalysts, such as sulfuric acid, metal 432 chlorides and transition metals.67, 68, 218 Although the biocatalytic (trans)esterification of 433 HMF into AOOMF can be traced back to 1993,219 where lipase and vinyl ester were used in 434 tetrahydrofuran, this field has hitherto attracted very little interest, which should be due to 435 the poorer stabilities and recyclabilities of enzymes and high costs of substrates. 436 Recently, Qin et al. reported a more promising catalytic system for the 437 (trans)esterification of HMF by using Novozym 435 and levulinic acid (LA) as a immobilized 438 lipase and a renewable acyl donor in the commercially available biomass-based solvent 2- 439 methyltetrahydrofuran (MTHF) (Figure 13), respectively, leading to 94% conversion of HMF 440 at 40 C for 12 h.220 In addition to the excellent thermostability of Novozym 435 and its high 441 tolerance to LA, this high conversion should also be ascribed to the usage of MTHF, because 442 it not only had much better enzyme-compatibility, but also could increase substrate affinity 443 of enzyme.220 More interestingly, Krystof et al. in 2013 established a solvent-free catalytic 444 system, and the results indicated that high yields of various AOOMF, such as 5- 445 methoxycarbonyloxymethylfurfural (MOMF), 5-acetyloxymethylfurfural (AOMF), 5- 446 hexanoyloxymethylfurfural (HOMF) and 5-dodecanoyloxymethylfurfural (DOMF), could be 447 obtained in the presence of CALB by the (trans)esterification of HMF with 448 dimethylcarbonate (DMC), ethyl acetate (EA), ethyl hexanoate (EH) and dodecanoic acid 449 (DA),216 respectively. Although this solvent-free catalytic system avoided the usage of 24 ACS Paragon Plus Environment Page 24 of 105 Page 25 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 450 external solvents and then lowered the corresponding production costs, the separation of 451 the formed AOOMF from the unreacted HMF would be still needed. Because HMF is highly 452 reactive, especially at high temperature, so the traditional procedures, such as distillation, 453 might not be recommended for this specific case. Considering the above situations, the 454 authors developed a biphasic system by using deep eutectic solvents (DES) as separation 455 agents.216 DES, as an kind of emerging solvents that are commonly formed by hydrogen- 456 bond donors (such as alcohols, amines and organic acids) and hydrogen-bond acceptors 457 (such as choline chloride), were able to dissolve the hydrogen-bond-containing HMF, but 458 tended to form a second phase with the non-hydrogen-bond-containing AOOMF (Figure 14). 459 Hence, by means of DES, AOOMF could be successfully separated in high purity of 99% with 460 satisfactory recovery efficiency of 93%.216 461 462 463 BHMF. BHMF, possessing one carbonyl group, two furan rings and three hydroxyl 464 groups, is a multifunctional compound, which can be employed for the production of 465 oxygen-containing diesels,72 long-chain alkanes221 and linear or branched polyurethanes.222 466 In terms of theory, BHMF can not be directly formed by the self-aldol condensation of HMF 467 due to the absence of -hydrogen atom.222-224 However, Chen and co-workers in 2012-2016 468 found that two molecules of HMF could readily connect together to produce BHMF over 1- 469 ethyl-3-methylimidazolin-2-ylidene, 1,3-dimesitylbutyl-imidazolin-2-ylidene, 3-benzyl-5-(2- 470 hydroxyethyl)-4-methylthiazolin- 5-ylidene or 1,3,4-triphenyl-4,5-dihydro-1H-1,2,4-triazol25 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 471 5-ylidene, a kind of N-heterocyclic carbenes that are present in the corresponding ionic 472 liquids, via the umpolung carboligation,73-76 which was verified to be related to the change 473 of electrophilic carbonyl carbon into the nucleophilic center as an acyl anion equivalent 474 (Figure 15). Gratifyingly, Donnelly et al. in 2015 confirmed that the umpolung carboligation 475 of HMF could also be accomplished by means of an enzymatic system, in which thiamine- 476 diphosphate dependent benzaldehyde lyase (BAL) from Pseudomonas fluorescens was used 477 as a catalyst in phosphate buffer, leading to 70% yield of BHMF at RT for 18 h.224 To the best 478 of our knowledge, this is by far the only one report on the biocatalytic umpolung 479 carboligation of HMF into BHMF. Note that if the reaction time was prolonged, the 480 produced BHMF would be further oxidized into its diketone (Figure 16). More excitingly, 481 due to the presence of three hydroxyl groups in BHMF, it was also proved to be an effective 482 hydrogen-bond donor to create a new DES by mixing with choline chloride (Figure 17), 483 which should be a neoteric biomass-derived solvent. 484 485 486 487 HMFA. HMFA, which is similar to furfurylamine with many potential applications in the 488 preparation of diuretics, antihypertensives, antiseptic agents and curing agents,77 is a very 489 important intermediate that can be produced by the reductive amination of HMF. Due to 490 the sensitivity of furan ring to reductive conditions and the tendency to form secondary and 491 tertiary amines,225-228 the conventional chemocatalytic pathways are not desirable for the 26 ACS Paragon Plus Environment Page 26 of 105 Page 27 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 492 synthesis of HMFA. For this reason, biocatalytic pathways should be a promising alternative. 493 Fortunately, Dunbabin et al. in 2017 confirmed this speculation (Figure 18), in which three 494 transaminases 495 Arthrobacter sp. ArRMut11 (AS-TAM) and Mycobacterium vanbaalenii (MV-TAM) were 496 employed for the reductive amination of HMF in the presence of isopropylamine (IPA) or α- 497 methylbenzylamine (MBA) as an amine donor, resulting in HMFA with 66%-89% yield.77 498 Note that when the amine donor was IPA, the large-scale production and isolation of HMFA 499 would be more facile, because IPA and its corresponding product (acetone) are very volatile. 500 Furthermore, it should be particularly pointed out that TAM was also applicable for the 501 reductive amination of other furan-based aldehydes, such as FF, DFF, FFCA and 2- 502 acetylfuran (AF), into the corresponding primary amines with excellent yields, which 503 provides a high-efficiency method to produce the valuable nitrogen-implanted chemicals. 504 505 (TAM) from Chromobacterium violaceum DSM30191 (CV-TAM), CONCLUSIONS AND PERSPECTIVES 506 Currently, the high-value utilization of HMF is a hot topic in biorefinery process. As a 507 typical kind of alternatives to chemocatalytic pathways, some biocatalytic pathways with a 508 series of well-known advantages have been gradually reported in recent years for the 509 synthesis of various valuable derivatives, such as DFF, HFCA, FFCA, FDCA, DHMF, AOOMF, 510 BHMF and HMFA. Although several interesting and promising results were obtained, their 511 practical applications still have a lot of problems and challenges, especially under 512 industrially-sound conditions. Among many possible bottlenecks, the first and foremost one 27 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 513 should be the strong toxicity and inhibitory effect of HMF on biocatalysts, including enzymes 514 and whole-cells. Thus, developing the more robust biocatalysts with high tolerance and 515 selectivity is urgently needed in this research field. Besides, in order to further promote the 516 biocatalytic transformation of HMF into high-value derivatives on an industrial scale, the 517 following issues should also be emphatically strengthened in the future studies: (1) 518 Thoroughly investigating the metabolic mechanisms and rate-limiting steps of HMF 519 biotransformation to supply some meritorious references for the exploration and 520 modification of novel transformation pathways in the corresponding microorganisms. (2) 521 Intensively analyzing the stereochemical structures and active sites of enzymes to provide 522 a few theoretical directions for their subsequent design and usage. (3) Systematically 523 constructing the effective mutation and expression technologies of enzymes to improve 524 their yields and activities and then accomplish the selective synthesis of specific products. 525 (4) Creatively establishing the effective and inexpensive immobilization methods of 526 enzymes and whole-cells to realize their recovery and reuse and then lower the relevant 527 costs. (5) Comprehensively building high-efficiency and energy-efficient separation and 528 purification of target products on basis of their respective physicochemical properties to 529 push them into the actual application processes. (6) Innovatively exploring other possible 530 biocatalytic pathways to synthesize new high-value derivatives except the above- 531 mentioned derivatives and then expand the application range of HMF. Last but not at least, 532 considerable efforts should also be consecutively concentrated on the economical 533 production of HMF due to its high and unacceptable price. If the biocatalytic transformation 28 ACS Paragon Plus Environment Page 28 of 105 Page 29 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 534 of HMF can be in situ combined with its economical production, a much greater 535 breakthrough in the synthesis of HMF-based high-value derivatives may be achieved in the 536 near future. Despite facing many difficulties, we still believe that this is predictable and 537 realizable with the deepening of researches and the progressing of technologies. 538 ACKNOWLEDGEMENTS 539 This work was financially supported by the National Natural Science Foundation of 540 China (21506071), the Natural Science Foundation of Jiangsu Province (BK20150413) and 541 the Special Foundation for Young Talents of Jiangsu Collaborative Innovation Center of 542 Regional Modern Agriculture & Environmental Protection (HSXT2-316). 543 AUTHOR INFORMATION 544 Corresponding Author 545 *Lei 546 *Jiaxing 547 548 Hu. E-mail: [email protected] . Telephone/Fax: +86-0517-83526983. Xu. E-mail: [email protected] . Telephone/Fax: +86-0517-83526983. Notes The authors declare no competing financial interest. 549 REFERENCES 550 (1) Chatterjee, C.; Pong, F.; Sen, A. Chemical conversion pathways for carbohydrates. Green 551 Chem. 2015, 17 (1), 40-71, DOI 10.1039/c4gc01062k. 552 (2) Li, H.; Fang, Z.; Smith, R. 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An interchangeable homogeneous ⇔ heterogeneous catalyst 64 ACS Paragon Plus Environment Page 65 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 1290 system for furfural upgrading. Green Chem. 2015, 17 (12), 5149-5153, DOI 1291 10.1039/c5gc01648g. 1292 (224) Donnelly, J.; Müller, C. R.; Wiermans, L.; De María, P. D. Upgrading biogenic furans: 1293 Blended C10 - C12 platform chemicals via lyase-catalyzed carboligations and formation 1294 of novel C12 - choline chloride-based deep-eutectic-solvents. Green Chem. 2015, 17 (5), 1295 2714-2718, DOI 10.1039/c5gc00342c. 1296 (225) Kise, N.; Ueda, N. Reductive coupling of aromatic oxims and azines to 1,2-diamines 1297 using Zn-MsOH or Zn-TiCl4. Tetrahedron Lett. 2001, 42 (12), 2365-2368, DOI 1298 10.1016/S0040-4039(01)00178-2. 1299 (226) Denton, T. T.; Zhang, X. D.; Cashman, J. 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Catal. 1308 Commun. 2018, 114, 15-18, DOI 10.1016/j.catcom.2018.05.011. 65 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering OH O O HO HO HO OH HO O O OH OH O OH O H OH OHOH O OH OH Cellulose OH O O O OH HO O HO Sucrose n OH OH H OH O n Starch Hydrolysis Hydrolysis Hydrolysis OH O OH Hydrolysis HO OH OH H H Hydrolysis O HO H Fructose O HO ro ge O n tio O H te OH rif lig a OH O O Es FFCA n C ar tio bo a ic O OH BHMF OH HFCA O O O O Oxidation O O OH O O HMF OH O HO n n O FDCA 1310 tio HO OH Oxidation OH NH2 O O 1309 a in Am tio H DFF HO O O HMFA na O HO HO HO HO O O OH OH OH DHMF H OH Dehydration HO O Maltose HO OH HO HO OHOH Glucose Isomerization O Cellobiose OH HO O HO HO d Hy 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 66 of 105 R OH O O H AOOMF Figure 1. Catalytic transformation of biomass-derived HMF into high-value derivatives. 66 ACS Paragon Plus Environment Page 67 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 1311 1312 Figure 2. Ultraviolet-visible spectrum of the 0 and 24 h samples of K. pneumoniae in the 1313 presence of 10 mM of FF or HMF. Adapted with permission from ref 111. Copyright 1993 1314 Springer Nature. 67 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 O Page 68 of 105 O HO OH DHMF FFA NAD(P) + NAD(P) ARD + NAD(P) + O NAD(P) O2/H2O H2O2 NAD(P)H O Acyl-CoA syntherase O HO CO2 Oxidase OH FDCA H2O2 O O2/H2O H2O2 O COOH FFCA TCA cycle ADP O O O S CoA Furoyl-CoA ACCOX ACCred HOOC HOOC H 2O Dehydrogenase 1315 Oxidase ATP CoASH HO O2/H2O NAD(P)H O O COOH Decarboxylase FOA + Dehydrogenase Oxidase Dehydrogenase O HMF FF NAD(P) NAD(P)H HO O + ADH NAD(P)H NAD(P)H O NAD(P)+ ARD ADH NAD(P)H OH COOH O 2-Oxoglutaric acid O O CoASH H 2O O S CoA 5-Hydroxy-2-furoyl-CoA O O S CoA O H2O 2-Oxoglutaryl-CoA rase este Thio S CoA Lactonase 5-Oxo-2-furoyl-CoA O HOOC S CoA OH 2-Hydroxyglutaryl-CoA 1316 Figure 3. Metabolic pathways of HMF in microorganisms. Note: NADH, reduced form of 1317 nicotinamide adenine dinucleotide; NADPH, reduced form of nicotinamide adenine 1318 dinucleotide phosphate; NAD+, oxidized form of nicotinamide adenine dinucleotide; 1319 NADP+, oxidized form of nicotinamide adenine dinucleotide phosphate; ACC, acceptor, 1320 which is reduced (red) or oxidized (ox); CoA: coenzyme-A; ATP, adenosine triphosphate; 1321 ADP, adenosine diphosphate. Adapted with permission from ref 134. Copyright 2015 68 ACS Paragon Plus Environment Page 69 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1322 ACS Sustainable Chemistry & Engineering BioMed Central. 69 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 AO O HO O H + O2 Phosphate buffer 1324 O O H2O2 + H O DFF HMF 1323 Page 70 of 105 CTL Figure 4. Oxidation of HMF into DFF over AO and CTL.151 70 ACS Paragon Plus Environment H Page 71 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering O R O O O Lipase (CAL-B) H2O2 R OOH HO O OH HFCA OH O O R 1325 HO OH O H HMF 1326 Figure 5. Lipase-catalyzed oxidation of HMF into HFCA via the Baeyer-Villiger-type 1327 reaction in the presence of H2O2. Adapted with permission from ref 171. Copyright 2013 1328 John Wiley and Sons. 71 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 72 of 105 O O HO O H HLADH NAD+ H 2O OH HFCA HMF 1329 O HO NADH Hb H 2O 2 1330 Figure 6. HLADH-catalyzed and Hb-mediated oxidation of HMF into HFCA. Adapted with 1331 permission from ref 159. Copyright 2017 John Wiley and Sons. 72 ACS Paragon Plus Environment Page 73 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 1332 1333 Figure 7. Stereoview of the active site of HMFO. Residues surrounding the space in front 1334 of the flavin ring are shown, including three water molecules (red spheres) that are 1335 conserved in all determined crystal structures. Carbon, oxygen, nitrogen, sulfur and 1336 phosphorus atoms are expressed by yellow, red, blue, green and magenta, respectively. 1337 Hydrogen bonds are represented as the dashed lines. Adapted with permission from ref 1338 142. Copyright 2015 ACS Publications. 73 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1339 1340 Figure 8. Modeling of substrate binding in the active site of HMFO. (A) Proposed model 1341 for the binding of HMF. The furan ring orientation is constrained by the narrow shape of 1342 the cleft, and the α-carbon is in the proper position to be oxidized by the flavin. The 1343 protein atom closest to the hydroxyl group is N of H467, which is perfectly positioned to 1344 form a hydrogen bond with HMF. The arginine side chain of V367R mutant is modeled to 1345 show the possible interaction with HMF, which will provide an explanation for the 1346 increased activity of this mutant with FFCA. (B) Similarly to HMF, the secondary alcohol 1347 (S)-1-phenylethanol is modeled in the active site of HMFO with the assistance of W466F. 74 ACS Paragon Plus Environment Page 74 of 105 Page 75 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1348 ACS Sustainable Chemistry & Engineering Adapted with permission from ref 142. Copyright 2015 ACS Publications. 75 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 76 of 105 O Route A HO O O OH Route A O O HFCA HO O FFCA O ute Ro HMF 1349 1350 B O O Route B O O OH O DFF HO O FDCA Figure 9. Pathways for the complete oxidation of HMF into FDCA. 76 ACS Paragon Plus Environment OH Page 77 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering HO 1351 O HMF O GO, Air Water O O O O O CALB,H2O2 EtOAc-tBuOH DFF HO O OH FDCA 1352 Figure 10. Tandem oxidation of HMF into FDCA over GO and CALB. Adapted with 1353 permission from ref 151. Copyright 2015 Royal Society of Chemistry. 77 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering HO HMF ALD (aldH) H NADP+ HO 1354 NADPH O FFCA OH ALD (aldH) NADP+ NADPH Gene overexpression O OH O O O O Insertional mutation O HO OH FDCA DCAD (dcaD) O O ARD (aldR) 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 78 of 105 O O OH FOA DHMF 1355 Figure 11. Metabolic pathways of HMF and FDCA in R. ornithinolytica BF60. Adapted with 1356 permission from ref 122. Copyright 2017 American Society for Microbiology. 78 ACS Paragon Plus Environment Page 79 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering HO 1357 O HMF (50~400 mM) O E. coli CCZU-K14 HO Phosphate buffer, Glucose, 30 C O OH DHMF (Yield: 70~100%) 1358 Figure 12. Biocatalytic reduction of HMF into DHMF by E. coli CCZU-K14. Adapted with 1359 permission from ref 118. Copyright 2018 Elsevier. 79 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 80 of 105 O O 1360 O HMF O OH OH O O Novozym 435, MTHF O HMFL O O + H 2O 1361 Figure 13. Biocatalytic esterification of HMF into HMFL over Novozym 435. Adapted with 1362 permission from ref 220. Copyright 2016 ACS Publications. 80 ACS Paragon Plus Environment Page 81 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering O R AOOMF O O O O AOOMF + DES HO R O O HO HMF O O O DES 1363 O O HMF DEEP-EUTECTIC SOLVENTS (DES) OH O OH N N N OH OH OH HO OH H2N NH2 OH HO Cl Cl Cl OH OH Choline Chloride : Glycerol Choline Chloride : Urea Choline Chloride : Xylitol 1364 Figure 14. Separation of AOOMF and HMF by using DES. Adapted with permission from 1365 ref 216. Copyright 2013 John Wiley and Sons. 81 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 N O N OAc N +HOAc HOAc OH O O O O OH BHMF OH HO N OH O Page 82 of 105 HMF N N OH O N N O N H N O OH OH O N N OH O O H O OH N HMF 1366 OH OH O N 1367 Figure 15. Umpolung carboligation of HMF into BHMF over EMIY. Adapted with 1368 permission from ref 73. Copyright 2012 Royal Society of Chemistry. 82 ACS Paragon Plus Environment Page 83 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering HO 1369 HMF O Umpolung carboligation BAL O OH O OH O O O OH BHMF Oxidation OH BAL O O O Diketone OH 1370 Figure 16. BAL-catalyzed umpolung carboligation of HMF into BHMF and its spontaneous 1371 oxidation. Adapted with permission from ref 224. Copyright 2015 Royal Society of 1372 Chemistry. 83 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1373 1374 Figure 17. Formation of a new DES by combining BHMF and choline chloride. Adapted 1375 with permission from ref 224. Copyright 2015 Royal Society of Chemistry. 84 ACS Paragon Plus Environment Page 84 of 105 Page 85 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering HO O O TAM, Phosphate buffer HO HMF 1376 Coproduct Amine donor O NH2 HMFA 1377 Figure 18. Reductive amination of HMF into HMFA over TAM. Adapted with permission 1378 from ref 77. Copyright 2017 Royal Society of Chemistry. 85 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 Page 86 of 105 Table 1. Various types of microorganisms and oxidoreductases for metabolizing HMF 1379 Category Microorganism Strain Enzyme Ref Bacterium Acetobacter rancens IFO3297 124 Bacterium Acetobacter pasteurianus FO13753 124 Bacterium Burkholderia cepacia H-1 120 Bacterium B. cepacia H-2 120 Bacterium B. cepacia H-3 120 Bacterium Citrobacter freundii Quinn 111 Bacterium Clostridium cetobutylicum ATCC 824 ARD 113 Bacterium Cupriavidus basilensis HMF14 HMFH 137 Bacterium Caldariomyces fumago CPO 145 Bacterium Comamonas testosteroni SC1588 123 Bacterium Escherichia coli ATCC 1175 111 86 ACS Paragon Plus Environment Page 87 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 ACS Sustainable Chemistry & Engineering Bacterium E. coli LS5218 112 Bacterium E. coli 055 B5 111 Bacterium E. coli B5 Cas 111 Bacterium E. coli Snyder 111 Bacterium E. coli MC4100 116 Bacterium E. coli CCZU-K14 ADH 118 Bacterium E. coli TP1000 PAO 149 Bacterium E. coli XO 151 Bacterium Enterobacter cloacae ATCC 13047 111 Bacterium Enterobacter aerogenes ATCC 13048 111 Bacterium Enterobacter sp. FDS8 114 Bacterium Klebsiella pneumoniae UI 495 111 Bacterium Proteus mirabilis H 111 87 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 Page 88 of 105 Bacterium Pseudomonas putida KT2440 117 Bacterium P. putida S12 ALD 137 Bacterium Raoultella ornithinolytica BF60 ARD 122 Bacterium Rhodococcus capsulatus E232V XDH 149 Bacterium Serratia liquefaciens LF14 124 Bacterium Methylobacterium radiotolerans G-2 121 Bacterium Methylovorus sp. MP688 HMFO 140 Yeast Saccharomyces cerevisiae ATCC 211239 ADH 125 Yeast S. cerevisiae NRRL Y-12632 ARD 125 Yeast S. cerevisiae NRRL Y-50049 ARD 104 Yeast S. cerevisiae BY4742 ARD 162 Yeast S. cerevisiae 307-12H60 126 Yeast S. cerevisiae 307-12H120 126 88 ACS Paragon Plus Environment Page 89 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 ACS Sustainable Chemistry & Engineering Yeast S. cerevisiae P6H9 ADH 131 Yeast S. cerevisiae TMB3000 ADH 157 Yeast S. cerevisiae TMB3400 ADH 158 Yeast Scheffersomyces stipitis KCTC 7228 130 Yeast Pichia stipitis NRRL Y-7124 ADH 125 Yeast P. stipitis 307 10H60 126 Yeast P. stipitis αMnP1-1 MnP 155 Yeast P. pastoris AO 136 Yeast Candida boidinii AO 151 Yeast Meyerozyma guilliermondii SC1103 132 Fungus Amorphotheca resinae ZN1 ARD 133 Fungus Agrocybe aegerita UPO 146 Fungus Bjerkandera adusta AAO 147 89 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 Page 90 of 105 Fungus Trametes versicolor LCA 151 Fungus Pleurotus ostreatus PC9 AAO 135 Fungus P. ostreatus PC9 AAD 135 Fungus Pleurotus eryngii AAO 146 Fungus Panus conchatus LCA 151 Fungus Fusarium graminearum GO 149 Fungus Flammulina velutipes LCA 151 Fungus Dactylium dendroides AO 151 Fungus D. dendroides GO 151 90 ACS Paragon Plus Environment Page 91 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 ACS Sustainable Chemistry & Engineering Table 2. Biocatalytic oxidation of HMF into high-value derivatives 1381 HMF Product Catalyst Oxidant Buffer pH concentration (mM) Temperature Time (C) (h) Conversion Yield (%) (%) Ref DFF CPO H2O2 Citrate 5.0 50 RT 5/2 89 53 145 DFF CPO H2O2 Citrate 6.0 50 RT 5/2 83 50 145 DFF AO/CTL Air Phosphate 7.5 30 25 72 41 151 DFF GO/CTL/HRP Air Phosphate 7.0 30 25 72 28 151 DFF GO/CTL/HRP Air Water 30 25 72 56 151 DFF GO/CTL/HRP Air Water 30 25 96 92 151 DFF GO/CTL/HRPa Air Phosphate 7.5 50 37 1 88 148 DFF GO/CTL/HRPa Air Phosphate 7.0 50 37 1 91 148 DFF GO/CTL/HRPa Air Phosphate 6.5 50 37 1 77 148 DFF GO/CTL/HRPa Air Phosphate 7.0 100 37 1 80 148 HFCA CALB H2O2 tBuOHb 50 40 24 76 171 91 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 Page 92 of 105 HFCA XO Air Phosphate 7.5 26 37 7 95 94 151 HFCA UPO H2O2 Phosphate 7.0 3 25 24 97 146 HFCA HLADH NAD(P)+ Phosphate 7.0 10 30 60 100 81 159 HFCA PAMO O2 Phosphate 7.5 5 25 16 85 154 HFCA S. liquefaciens LF14 Air Phosphate 7.0 300c 20 26 97 97 124 HFCA C. testosteroni SC1588 Air Phosphate 8.0 40 30 11 100 92 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 40 35 11 100 94 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 90 30 24 100 99 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 100 30 42 100 98 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 110 30 48 100 96 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 130 30 60 100 88 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 150 30 60 100 70 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 180 30 120 100 52d 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 130 30 60 100 91d 123 92 ACS Paragon Plus Environment Page 93 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 ACS Sustainable Chemistry & Engineering HFCA C. testosteroni SC1588 Air Phosphate 7.0 160 30 60 100 90d 123 HFCA C. testosteroni SC1588 Air Phosphate 7.0 160 30 36 100 98e 123 FFCA CALB H2O2 tBuOHb 50 40 24 52f 171 FFCA TEMPO/LCA Air Acetate 4.5 30 25 48 68 151 FFCA TEMPO/LCA Air Acetate 4.5 30 25 72 70 151 FFCA TEMPO/LCA Air Acetate 4.5 30 25 96 82 151 FFCA AAO O2 Phosphate 6.0 3 25 4 100 98 146 FFCA AAO O2 Phosphate 6.0 3 25 2 90g 146 FFCA HMFO O2 Phosphate 8.0 2 25 5 100 92 140 FDCA CALB H2O2 tBuOHb 50 40 24 93f 171 FDCA CALB H2O2 tBuOHb 50 40 24 100g 171 FDCA CALB H2O2 tBuOHb 30 40 24 88h 151 FDCA GO/PAOa Air Phosphate 7.0 50 37 8 100 100 149 FDCA GO/PAOa Air Phosphate 7.0 100 37 10 74 149 93 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 Page 94 of 105 FDCA AAO/UPO O2 Phosphate 7.0 3 25 120 100 91 146 FDCA AO/AAO/UPO O2 Phosphate 7.0 3/2i 25 120 100 98j 136 FDCA GO/AAO/UPO O2 Phosphate 7.5 10 25 24 95 80 147 FDCA PAO/CTL Air Phosphate 7.0 50 37 3/2 100 91g 148 FDCA GO/PAO/CTL/HRPa Air Phosphate 7.0 50 37 3 100 100 148 FDCA GO/PAO/CTL/HRPa Air Phosphate 7.0 100 37 6 100 100 148 FDCA HMFO O2 Phosphate 7.0 4 25 15 100 95 141 FDCA B. cepacia H-2 Air MSMk 7.0 16 26 24 100 48 120 FDCA B. cepacia H-2 Air MSMk 7.0 16 28 24 100 51 120 FDCA M. radiotolerans G-2 Air MSMk 7.0 8 26 24 100 42 121 FDCA M. radiotolerans G-2 Air MSMk 7.0 8 28 24 100 40 121 FDCA R. ornithinolytica BF60l Air Phosphate 7.0 100 30 168 100 51 122 FDCA R. ornithinolytica BF60m Air Phosphate 8.0 100 30 168 100 59 122 FDCA R. ornithinolytica BF60n Air Phosphate 8.0 100 30 168 100 72 122 94 ACS Paragon Plus Environment Page 95 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 ACS Sustainable Chemistry & Engineering FDCA R. ornithinolytica BF60o Air Phosphate 8.0 100 30 168 100 89 122 FDCA R. ornithinolytica BF60p Air Phosphate 8.0 100 30 120 100 94 143 FDCA P. putida S12q O2 MMr 7.0 25 30 144 100 97 119 The used GO is the M3-5 variant of GO. b EtOAc was added as the acyl donor. c HMF was added at 26 times into the reaction mixture 1382 a 1383 to reduce its inhibitory effect. d HFCA was synthesized in the presence of 20 mM histidine. e HFCA was synthesized by furfuryl alcohol- 1384 induced cells in the presence of 20 mM histidine. f The product yield is based on the isolated DFF that was synthesized from HMF by 1385 TEMPO. g The product yield is based on the pure DFF. h The product yield is based on the isolated DFF that was synthesized from HMF 1386 by GO. i Methanol was added as the cosubstrate to promote the formation of FDCA. j MMF was used as the substrate. k MSM is 1387 representative of mineral salt medium. l R. ornithinolytica BF60 is the wild-type strain. m R. ornithinolytica BF60 is the dcaD mutant. n 1388 R. ornithinolytica BF60 is the aldR and dcaD double mutant. 1389 ornithinolytica BF60 is the hmfH and hmfO transgenic strain. q P. putida S12 is the hmfH transgenic strain. r MM is representative of 1390 minimal medium. o R. ornithinolytica BF60 is the aldH overexpressing strain. 95 ACS Paragon Plus Environment p R. ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 Page 96 of 105 Table 3. Biocatalytic reduction of HMF into DHMF 1391 HMF concentration Temperature Time Conversion Yield (mM) (C) (h) (%) (%) 30 30 48 100 125 SCMa 30 30 48 100 100 126 S. cerevisiae 307-12H60 SCMa 60 30 48 100 100 126 S. cerevisiae 307-12H120 SCMa 30 30 48 100 100 126 S. cerevisiae 307-12H120 SCMa 60 30 48 100 100 126 M. guilliermondi SC1103 Phosphate 7.2 40 30 24 55 132 M. guilliermondi SC1103 Phosphateb 7.2 40 30 7 91 132 M. guilliermondi SC1103 Phosphateb 7.2 100 35 12 86 132 M. guilliermondi SC1103 Phosphateb 7.2 110 35 36 87 132 M. guilliermondi SC1103c Tris-HClb 8.0 50 35 5 100 100 214 M. guilliermondi SC1103c Tris-HClb 8.0 75 35 10 98 214 Catalyst Buffer pH S. cerevisiae NRRL Y-12632 SCMa S. cerevisiae 307-12H60 96 ACS Paragon Plus Environment Ref Page 97 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 ACS Sustainable Chemistry & Engineering M. guilliermondi SC1103c Tris-HClb 8.0 200 35 7 86 214 M. guilliermondi SC1103c Tris-HClb 8.0 300 35 24 82 214 M. guilliermondi SC1103c Tris-HClb 8.0 300 35 36 61 214 E. coli CCZU-K14d Phosphateb 6.5 50 30 10 96 118 E. coli CCZU-K14d Phosphateb 6.5 100 30 10 85 118 E. coli CCZU-K14d Phosphateb 6.5 100 30 24 100 100 118 E. coli CCZU-K14d Phosphateb 6.5 200 30 72 91 118 E. coli CCZU-K14d Phosphateb 6.5 400 30 72 70 118 SCM is representative of synthetic complete medium. b Glucose was added as a cosubstrate. a 1393 acclimatized and immobilized strain. d E. coli CCZU-K14 is a recombinational strain with high activity of carbonyl reductase. 97 ACS Paragon Plus Environment c M. guilliermondi SC113 is an 1392 ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 Page 98 of 105 Table 4. Biocatalytic transformation of HMF into high-value derivatives via (trans)esterification, carboligation and amination 1394 Product Catalyst Cosubstrate Buffer pH HMF concentration (mM) HMFLa Novozym 435 LA MTHF 50 40 12 95 220 HMFLa Novozym 435 LA tBuOH 50 40 12 94 220 HMFLa Novozym 435 LA CPMEb 50 40 12 92 220 HMFLa Novozym 435 LA MBc 50 40 24 92 220 MOMF CALB DMC 50 40 24 91 216 AOMF CALB EA 50 RT 24 90 216 HOMF CALB EH 50 40 24 81 216 DOMF CALB DA 50 60 24 85 216 BHMF BAL Phosphate 8.0 20 RT 18 70 224 HMFA CV-TAM MBA Phosphate 7.5 20 30 24 75 77 HMFA CV-TAM IPA Phosphate 7.5 20 35 24 89 77 98 ACS Paragon Plus Environment Temperature (C) Time (h) Conversion (%) Yield (%) Ref Page 99 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 ACS Sustainable Chemistry & Engineering HMFA ASTAM MBA Phosphate 7.5 20 30 24 69 77 HMFA AS-TAM IPA Phosphate 7.5 20 35 24 44 77 HMFA MV-TAM MBA Phosphate 7.5 20 30 24 53 77 HMFA MV-TAM IPA Phosphate 7.5 20 35 24 66 77 FFAd CV-TAM MBA Phosphate 7.5 20e 30 24 80 77 FFAd CV-TAM IPA Phosphate 7.5 20e 35 24 92 77 AMFCAf CV-TAM IPA Phosphate 7.5 20g 35 24 88 77 AMFCAf MV-TAM IPA Phosphate 7.5 20g 35 24 59 77 DAMFh CV-TAM MBA Phosphate 7.5 20i 30 24 70 77 FEAj MV-TAM MBA Phosphate 7.5 20k 30 24 54 77 1395 a HMFL is representative of HMF levulinate. b CPME is representative of cyclopentyl methyl ether. c MB is representative of 2-methyl- 1396 2-butanol. 1397 furancarboxylic acid. g FFCA was used as a substrate. h DAMF is representative of 2,5-diaminomethylfuran. i DFF was used as a substrate. 1398 j FEA d FFA is representative of furfurylamine. e FF was used as a substrate. f AMFCA is representative of 5-aminomethyl-2- is representative of 1-furan-2-ethylamine. k AF was used as a substrate. 99 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1399 Graphical abstract 1400 1401 1402 Recent studies and advancements on the biotransformation of HMF over the corresponding enzymes or whole-cells are comprehensively summarized and discussed. 100 ACS Paragon Plus Environment Page 100 of 105 Page 101 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1403 ACS Sustainable Chemistry & Engineering Biographies and Photographs 1404 1405 Lei Hu was born in Shandong, China. He received his M.S. and Ph.D. degrees in 1406 microbiology and energy chemistry from Fujian Agriculture and Forestry University and 1407 Xiamen University in 2010 and 2013, respectively. Since 2013, he joined the School of 1408 Chemistry and Chemical Engineering at Huaiyin Normal University. In 2016, he was 1409 promoted to associate professor, and his current research interests are mainly focused 1410 on biomass conversion, material synthesis and green chemistry. 1411 1412 Aiyong He was born in Jiangsu, China. He received his B.S. and Ph.D. degrees in 1413 Biological Engineering and Biochemical Engineering from Nanjing Tech University in 2010 1414 and 2016, respectively. Since 2017, he joined the School of Chemistry and Chemical 101 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1415 Engineering at Huaiyin Normal University, and his current research fields are mainly 1416 focused on the production of biobutanol from biomass and the biodetoxification of 5- 1417 hydroxymethylfurfural and other inhibitors. 1418 1419 Xiaoyan Liu was born in Shandong, China. She received her B.S. and Ph.D. degrees in 1420 Marine Biology and Microbiology from Ocean University of China in 2009 and 2012, 1421 respectively. Since 2012, she joined the School of Chemistry and Chemical Engineering at 1422 Huaiyin Normal University. In 2017, she was promoted to associate professor, and her 1423 current research areas are mainly focused on the biocatalytic synthesis of high value- 1424 added chemicals from biomass. 1425 1426 Jun Xia was born in Jiangsu, China. He received his B.S. and Ph.D. degrees in Biological 102 ACS Paragon Plus Environment Page 102 of 105 Page 103 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 1427 Engineering from Nanjing Tech University in 2009 and 2014, respectively. Since 2014, he 1428 joined the School of Chemistry and Chemical Engineering at Huaiyin Normal University. In 1429 2018, he was promoted to associate professor, and his current research interests are 1430 mainly focused on the biocatalytic synthesis of high value-added chemicals from biomass. 1431 1432 Jiaxing Xu was born in Shandong, China. He received his M.S. and Ph.D. degrees in 1433 biochemical engineering from Nanjing Tech University in 2010 and 2012, respectively. 1434 During his Doctor’s thesis, he worked with Prof. Bingfang He at the Extremophiles Lab of 1435 Jiangsu Province. Since 2012, he joined the School of Chemistry and Chemical Engineering 1436 at Huaiyin Normal University. In 2016, he was promoted to associate professor, and his 1437 current research fields are mainly focused on biomass conversion and enzymatic catalysis. 103 ACS Paragon Plus Environment ACS Sustainable Chemistry & Engineering 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 1438 1439 Shouyong Zhou was born in Jiangsu, China. He received his M.S. and Ph.D. degrees 1440 in applied chemistry and material chemical engineering from Nanjing Normal University 1441 and Nanjing Tech University in 2002 and 2009, respectively. From 2013 to 2014, he served 1442 as a senior visiting scholar in the Department of Chemical Engineering at Imperial College 1443 London and worked with Prof. Kang Li. In 2016, he was promoted to professor in the 1444 School of Chemistry and Chemical Engineering at Huaiyin Normal University, and his 1445 current research areas are mainly focused on membrane material synthesis and biomass 1446 conversion. 1447 1448 Jiming Xu was born in Jiangsu, China. He received his M.S. and Ph.D. degrees in 1449 organic chemistry and analytical chemistry from East China Normal University in 1998 and 104 ACS Paragon Plus Environment Page 104 of 105 Page 105 of 105 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 ACS Sustainable Chemistry & Engineering 1450 2003, respectively. From 2011 to 2012, he served as a senior visiting scholar at Sam 1451 Houston State University. Today, he is professor and dean of School of Chemistry and 1452 Chemical Engineering at Huaiyin Normal University, and his current research interests are 1453 mainly focused on electrochemistry and biomass conversion. 1454 105 ACS Paragon Plus Environment