Chapter 3
Approaches to Structure—Function Relationships for Naturally Occurring Cyclic Peptides A
Study of Tentoxin
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
1
1
1
Judson V. Edwards , Oliver D. Dailey, Jr. , John M . Bland , and Horace G. Cutler 2
1
2
Southern Regional Research Center, Agricultural Research Service, U.S. Department of Agriculture, New Orleans, LA 70179 Richard B. Russell Research Center, Agricultural Research Service, U.S. Department of Agriculture, Athens, GA 30613
Approaches to studying structure/activity relationships in naturally occurring peptides with agronomic relevance are discussed. The cyclic tetrapeptide tentoxin has been examined for the relation of its conformational properties to biological activity and its use as a template for derivation of synthetic analogs possessing divergent phyto-active properties. The cyclic tetrapeptide HC toxin is discussed for similar properties. Approaches to amide bond and amino acid modifications are discussed; these include the incorporation of thiomethylene ether, retro-inverso, alkyl spacer, N-alkyl, and "cyclopropylog" modifications in tentoxin and biologically active synthetic fragments. M i c r o b i a l and P l a n t P e p t i d e s The r o l e o f p e p t i d e s i n r e g u l a t i n g fundamental b i o l o g i c a l f u n c t i o n s i n both animal {I) and m i c r o b i a l c e l l s (2J i s w e l l documented. S t r u c t u r e - f u n c t i o n s t u d i e s employing s y n t h e t i c a l l y m o d i f i e d analogs have proven an i n d i s p e n s i b l e t o o l second o n l y t o t h e b i o l o g i c a l assay i n e v a l u a t i o n o f b i n d i n g and t r a n s d u c t i o n o f p e p t i d e s . In c o n t r a s t , l e s s a t t e n t i o n has been g i v e n t o s t r u c t u r e and f u n c t i o n o f indigenous and m i c r o b i a l l y f i x e d p e p t i d e s i n h i g h e r p l a n t s ( f o r a review see r e f e r e n c e 3 J • Evidence f o r p l a n t p e p t i d i c hormones ( o r f r a g m e n t s ) , analogous t o mammalian hormones, which r e g u l a t e v e g e t a t i v e growth and development i s a b s e n t , but morphogenetic s i g n a l f u n c t i o n s have been h y p o t h e s i z e d f o r o l i g o p e p t i d e s (1,5»). Reports o f b i o l o g i c a l l y a c t i v e p e p t i d e s i n p l a n t s and microbes have r e c e n t l y appeared {3,6-9). Of t h e p e p t i d e s c h a r a c t e r i z e d , both c y c l i c and l i n e a r s t r u c t u r e s have been f o u n d , and i n many cases unusual amino a c i d s have been noted (10,11). M i c r o b i a l p e p t i d e s t h a t possess s e l e c t i v e b i o l o g i c a l a c t i v i t y i n r o o t s o r a e r i a l t i s s u e s o f p l a n t s have been i s o l a t e d . The p l a n t r e g u l a t o r y e f f e c t s o f t h e b i c y c l i c p e n t a p e p t i d e m a l f o r m i n , a fungal m e t a b o l i t e , have been known f o r some t i m e (2,9,12,13) and t h e s t r u c t u r e - f u n c t i o n r e l a t i o n s h i p s e x p l o r e d ( 1 4 7 . R h i z o b a c t e r i a have This chapter not subject to U.S. copyright Published 1988 American Chemical Society
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
36
BIOLOGICALLY ACTIVE NATURAL PRODUCTS
been found t o enhance p l a n t growth by p r o d u c t i o n o f p e p t i d e s i d e r o p h o r e s ( 1 5 ^ 1 6 ) , and recent a t t e n t i o n has been g i v e n t o a group of p e p t i d e s ( R h i z o b i n s ) exuded by soybean nodules t h a t may be i n v o l v e d i n n i t r o g e n f i x a t i o n (9j_. A v a r i e t y of c y c l i c t e t r a p e p t i d e s have demonstrated very potent and h i g h l y s e l e c t i v e p h y t o t o x i c and p l a n t growth r e g u l a t i n g p r o p e r t i e s ( 1 1 ) .
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
A g r i c u l t u r a l P o t e n t i a l o f Some P h y t o - a c t i v e N a t u r a l l y Peptides
Occurring
The p o t e n t i a l use of b i o l o g i c a l l y - a c t i v e n a t u r a l products as t e m p l a t e s f o r t h e development of a g r i c u l t u r a l products has r e c e i v e d i n c r e a s e d a t t e n t i o n i n recent y e a r s . Our i n t e r e s t has been t o study t h e s t r u c t u r a l f e a t u r e s of f u n g a l l y - s e c r e t e d , c y c l i c t e t r a p e p t i d e s r e s p o n s i b l e f o r b i o l o g i c a l a c t i v i t y i n p l a n t s . The s t u d i e s d e s c r i b e d here deal p r i n c i p a l l y with two t y p e s o f approaches: a n a l y s i s of p r e d i c t a b l e conformational features relevant to b i o l o g i c a l a c t i v i t y , and t h e use of c y c l i c p e p t i d e s as a t e m p l a t e f o r d e r i v i n g b i o a c t i v e fragments. The fungal m e t a b o l i t e t e n t o x i n has been employed as a model compound. An u n d e r s t a n d i n g of t h e e f f e c t of p r e d i c t a b l e a l t e r a t i o n s i n secondary s t r u c t u r e r e s u l t i n g from primary s t r u c t u r a l changes p r o v i d e s a b e t t e r understanding o f c o n f o r m a t i o n a l requirements f o r b i o l o g i c a l a c t i v i t y . A thorough knowledge o f the c o n f o r m a t i o n a l requirements f o r a c t i v i t y i n t h e p l a n t i n c r e a s e s u n d e r s t a n d i n g of t h e mode of a c t i o n and f u r t h e r s t h e p o t e n t i a l f o r m a n i p u l a t i n g f u n g a l l y s e c r e t e d p e p t i d e s o f a g r i c u l t u r a l i n t e r e s t . For example t h e developments of a g o n i s t s and a n t a g o n i s t s from c o n f o r m a t i o n a l s t u d i e s on n e u r o p e p t i d e hormones have l e d t o an i n c r e a s e d understanding of s i t e s o f a c t i o n and development of t h e r a p e u t i c drugs ( 1 7 ) . With the d i s c l o s u r e o f a b i o l o g i c a l l y a c t i v e n a t u r a l product t h e q u e s t i o n o f t e n a r i s e s as t o how t h e compound may be employed as a t e m p l a t e f o r d e r i v a t i o n of s i m p l e r b i o a c t i v e f r a g m e n t s . Several examples o f b i o l o g i c a l a c t i v i t y of s u b t l y m o d i f i e d n a t u r a l products or s y n t h e t i c fragments have proven f r u i t f u l i n t h i s r e g a r d . The s y n t h e t i c d i p e p t i d e c a r b o b e n z o x y p r o l y l v a l i n o l i s a good example ( 1 8 ) . The p e p t i d e i s a s y n t h e t i c fragment of HC t o x i n (a c y c l i c t e t r a p e p t i d e which i s a potent i n h i b i t o r of a genotype of c o r n r o o t s ) y e t the fragment possesses an a l t o g e t h e r d i f f e r e n t b i o l o g i c a l response. Treatment of c o r n p l a n t s w i t h t h e s y n t h e t i c fragment provides f o r increased y i e l d s i n u n f e r t i l i z e d corn f i e l d s . We r e p o r t here approaches t o examining t h e p o t e n t i a l use of t h e c y c l i c t e t r a p e p t i d e t e n t o x i n as a t e m p l a t e f o r development of compounds of p o t e n t i a l h e r b i c i d a l and p l a n t growth r e g u l a t i n g activity. Both amide bond s u b s t i t u t i o n s and novel amino a c i d s have been used t o a s s e s s t h e n a t i v e c o n f o r m a t i o n of t e n t o x i n and f o r d e r i v a t i o n of novel b i o l o g i c a l l y - a c t i v e p e p t i d e s which are s y n t h e t i c fragments o f t e n t o x i n . The c y c l i c t e t r a p e p t i d e t e n t o x i n cyclo[N(Me)Ala-Leu-N(Me)A P h e - G l y ] ( F i g u r e 5) i s a secondary m e t a b o l i t e of A l t e r n a r i a a l t e r n a t a . T e n t o x i n i s of i n t e r e s t a g r i c u l t u r a l l y f o r i t s s e l e c t i v e h e r b i c i d a l a c t i o n . It induces c h l o r o s i s (a y e l l o w i n g i n p l a n t s due t o d e p l e t e d c h l o r o p h y l l l e v e l s ) i n s u s c e p t i b l e weed s p e c i e s w h i l e not e f f e c t i n g major crop p l a n t s such as corn and soybean ( 1 9 ) . z
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
3. EDWARDS ET AL.
Naturally Occurring Cyclic Peptides
37
As a c y c l i c t e t r a p e p t i d e , t e n t o x i n i s among a c l a s s of f u n g a l l y s e c r e t e d p e p t i d e s c o n t a i n i n g f o u r amino a c i d s . W i t h i n t h e past 10-15 y e a r s many of t h e s e analogs have been d i s c o v e r e d and t h e i r p h y t o t o x i c and growth r e g u l a t i n g e f f e c t s e l u c i d a t e d ( 1 6 ) . The s t r u c t u r a l and c o n f o r m a t i o n a l c h a r a c t e r i z a t i o n o f a v a r i e t y o f t h e s e analogs has been a c h i e v e d by e x t e n s i v e NMR, c r y s t a l l o g r a p h i c , and t h e o r e t i c a l c a l c u l a t i o n s (21). S t r u c t u r a l s i m i l a r i t i e s among t h e p e r t i n e n t p e p t i d e s i n c l u d e aromatic g r o u p s , a l k y l s i d e c h a i n s , and a t w e l v e atom p e p t i d e r i n g . V a r i o u s novel amino a c i d s are f o u n d , such as as dehydro amino a c i d s ( i n t e n t o x i n and t h e AM t o x i n s ) and t h e 8 - o x o - 9 , 10-epoxydecanoic a c i d [ i n HC t o x i n and C y l - 2 ( 1 1 ) ] . F i v e combinations of backbone c o n f o r m a t i o n are p o s s i b l e along t h e r i n g of c y c l i c t e t r a p e p t i d e s i n c l u d i n g : a l l c i s ; a l l t r a n s , 3 c i s and 1 t r a n s ; 3 t r a n s and 1 c i s ; and 2 c i s and 2 t r a n s . As a r e s u l t o f t h e s e backbone v a r i a t i o n s , d i s t i n c t i v e c o n f o r m a t i o n a l f e a t u r e s are present which may p r o v i d e u s e f u l leads i n d e s i g n i n g mimetic compounds. For example, t h e presence of a 7 - t u r n i n HC t o x i n , and c y c l o - ( L - P r o - D - V a l - ) 2 (found t o promote stem growth of r i c e s e e d l i n g s ) , r e s u l t i n g from a sequence s p e c i f i c r e v e r s e t u r n , suggests t h e p o s s i b l e use of r e v e r s e t u r n mimics t o develop s m a l l e r n o n - p e p t i d i c m o l e c u l e s w i t h analogous a c t i v i t y . A seven-membered r i n g compound of t h e t y p e r e c e n t l y proposed by Huffman and C a l l a h a n (20) may be u s e f u l i n t h e development of s i m p l i f i e d non-peptide analogs. P r e v i o u s work suggests t h a t t h e c y c l i c p e p t i d e backbone s e r v e s as a c a r r i e r which induces b i n d i n g , w h i l e a r e a c t i v e s i t e at a s p e c i f i c amino a c i d p a r t i c i p a t e s as t h e r e c e p t o r l i g a n d . Thus, t h e attachment of r e a c t i v e l i g a n d s t o c a r r i e r s m i m i c k i n g t h e p e p t i d e c o n f o r m a t i o n may p r o v i d e u s e f u l l e a d compounds. T e n t o x i n - an E x c e p t i o n t o Other N a t u r a l l y O c c u r r i n g Tetrapeptides.
Cyclic
S i n c e t h e a c t i v i t i e s of many of t h e c y c l i c t e t r a p e p t i d e s depend on t h e i r c o n f o r m a t i o n s , the r e l a t i o n s h i p between primary s t r u c t u r e and c o n f o r m a t i o n i s important t o u n d e r s t a n d . R e c e n t l y a u s e f u l set of e m p i r i c a l r u l e s has been r e p o r t e d t o p r e d i c t t h e c o n f o r m a t i o n of c y c l i c t e t r a p e p t i d e s on t h e b a s i s of p r i m a r y s t r u c t u r e ( 2 1 ) . The r u l e s are based on t h e many c o n f o r m a t i o n s r e p o r t e d f o r c y c l i c t e t r a p e p t i d e s ; t h e s e r u l e s have proven u s e f u l i n f i n d i n g a s t a r t i n g c o n f o r m a t i o n i n energy c a l c u l a t i o n s , and they t a k e i n t o c o n s i d e r a t i o n 7 - t u r n s , and t h e e f f e c t o f D-amino a c i d s on c o n f o r m a t i o n . Tentoxin r e p r e s e n t s an i n t e r e s t i n g e x c e p t i o n t o t h e r u l e g o v e r n i n g D-amino a c i d s i n t h a t t h e e f f e c t of t h e N - m e t h y l d e h y d r o p h e n y l a l a n i n e i s t o adopt an a l l L c o n f i g u r a t i o n a l sequence. The s h i f t t o an L form would not be a n t i c i p a t e d w i t h t e n t o x i n s i n c e g l y c i n e i s t r e a t e d as a D-amino a c i d a c c o r d i n g t o t h e r u l e s o f Kato et a l . I t has been proposed t h a t N-methyl-a, 3 - d e h y d r o a l a n i n e has a deep energy minimum (-7 k c a l w i t h = -80 and ¥ = - 10) ( 2 2 ) . S i m i l a r t o r s i o n a l angles have been found w i t h a l l p e p t i d e s having a Zo symmetry c o n f o r m a t i o n (21) . In a s s e s s i n g t h e r e l a t i v e c o n f o r m a t i o n a l f e a t u r e s of t e n t o x i n we have employed r u l e 2 o f Kato et al_. ( 2 1 ) : " i n a r i g h t - h a n d e d p e p t i d e r i n g , t h e c a r b o n y l group a c y l a t i n g a D r e s i d u e i s o r i e n t e d t o t h e upperside". The e f f e c t of t h e N-methylated amide bonds and
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
38
BIOLOGICALLY ACTIVE NATURAL PRODUCTS
s u b s t i t u t e d D-amino a c i d s on b i o l o g i c a l a c t i v i t y was t e s t e d . In a d d i t i o n t h e r e l a t i v e r o l e of t h e 12-membered r i n g w i t h r e s p e c t t o t h e f u n c t i o n a l groups was c o n s i d e r e d . T e n t o x i n analogs were designed and s y n t h e s i z e d t o e v a l u a t e s t e r e o c h e m i c a l and s t r u c t u r a l p r o p e r t i e s . B i o l o g i c a l t e s t s of t h e analogs demonstrated an i n t e r e s t i n g e f f e c t of D-amino a c i d - c o n t a i n i n g analogs on b i o l o g i c a l a c t i v i t y ( 2 3 ) , Since t e n t o x i n e x h i b i t e d d e v i a t i o n s from the e m p i r i c a l r u l e s , only t h o s e analogs where d e h y d r o p h e n y l a l a n i n e had not been N-methylated were s u b j e c t t o c o n f o r m a t i o n a l p r e d i c t i o n when s u b s t i t u t i n g D-amino a c i d s . S u b s t i t u t i o n of D-amino a c i d s f o r L-amino a c i d s produced an i n c r e a s e i n a c t i v i t y i n one analog and a decrease i n a n o t h e r . The i n c r e a s e d a c t i v i t y was observed i n t h e analog where a s u b s t i t u t i o n of D - A l a n i n e f o r L - A l a n i n e was made w i t h no N - m e t h y l a t i o n . On the o t h e r hand, a s u b s t i t u t i o n o f D-Leu f o r L-Leu i n an N-methylated analog produced a decrease i n a c t i v i t y . The p r e d i c t e d p r e f e r r e d c o n f o r m a t i o n a l s t a t e s f o r some c h l o r o s i s - i n d u c i n g t e n t o x i n analogs i n o r d e r o f t h e i r b i o l o g i c a l a c t i v i t y were c a l c u l a t e d ( F i g u r e 1 ) . Approaches t o S t u d y i n g Amide Bond and Amino A c i d M o d i f i c a t i o n s Tentoxi n
in
The use of amide bond m o d i f i c a t i o n s i n s t u d y i n g b i o a c t i v i t y p r o f i l e s has been very u s e f u l i n a s s e s s i n g b i o l o g i c a l l y a c t i v e p e p t i d e s and t h e s t a t u s of p e p t i d e backbone s t r u c t u r e - f u n c t i o n r e l a t i o n s h i p s . The f o l l o w i n g q u e s t i o n s were asked: 1) To what e x t e n t are t h e alignment and s t e r e o c h e m i s t r y of the p e p t i d e backbone c r i t i c a l ? 2) How does the m o d i f i c a t i o n of t h e backbone a f f e c t t h e r e s i s t a n c e toward enzymatic d e g r a d a t i o n ? 3) To what e x t e n t are r i g i d i t y and f l e x i b i l i t y o f p e p t i d e s m a n i f e s t e d i n t h e backbone? 4) Can a g o n i s t s and a n t a g o n i s t s be prepared by i n t r o d u c i n g p e p t i d e backbone modifications? These q u e s t i o n s have been asked about animal p e p t i d e hormones, and they are e q u a l l y a p p l i c a b l e t o p l a n t - a c t i v e c y c l i c t e t r a p e p t i d e s . We have s t u d i e d t h e i n c o r p o r a t i o n of a number of amide bond and amino a c i d m o d i f i c a t i o n s i n both t e n t o x i n and fragments of t e n t o x i n . A number of amide bond m o d i f i c a t i o n s were considered (Figure 2 ) . A Thiomethylene E t h e r - C o n t a i n i n g
Pseudo-dipeptide
The t h i o m e t h y l e n e e t h e r s u b s t i t u t i o n f o r an amide bond i s c h a r a c t e r i z e d by i t s enzymatic r e s i s t a n c e , c o m p a t i b i l i t y w i t h common p e p t i d e c o n f o r m a t i o n a l f e a t u r e s and s y n t h e t i c a c c e s s i b i l i t y from c h i r a l amino a c i d p r e c u r s o r s ( 2 4 ) . T h i s s u b s t i t u t i o n has been e x p l o r e d i n e n k e p h a l i n a n a l o g s , and i t has been found t o both c o n f e r i n c r e a s e d r e s i s t a n c e t o p r o t e o l y s i s as w e l l as n o n s e l e c t i v i t y i n c y c l i c enkephalin analogs. The p r e p a r a t i o n o f p e p t i d e s c o n t a i n i n g a t h i o m e t h y l e n e e t h e r s u b s t i t u t i o n f o r an amide bond has p r e v i o u s l y been a c c o m p l i s h e d w i t h a d i p e p t i d e s u r r o g a t e ( 2 4 ) . For t h e purposes o f our s t u d i e s we t a r g e t e d t h e d i p e p t i d e s u r r o g a t e Boc-Val¥ [CH2S]Phe-0H (1), s y n t h e s i z e d from t h e c h i r a l p r e c u r s o r s S - v a l i n o l and R - p h e n y l a l a n i n e (Scheme 1 ) . Bromination of phenylalanine r e s u l t s i n r e t e n t i o n of c o n f i g u r a t i o n . P r e p a r a t i o n of t h e a-mercapto a c i d of p h e n y l a l a n i n e from t h e bromo a c i d r e s u l t s i n i n v e r s i o n o f t h e c o n f i g u r a t i o n . Using t h e B o c - v a l i n y l t o s y l a t e and t h e disodium s a l t
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
Figure 1
Analogs of t e n t o x i n i n t h e i r p r e d i c t e d c o n f o r m a t i o n . R e l a t i v e potency and t h e s t e r e o g e n i c c o n f i g u r a t i o n at a l a n i n e and l e u c i n e r e s i d u e s are n o t e d . Data from r e f .
23.
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
Figure 2
CONR
R^H
CSNH
y
Many enhanced and equipotent analogs known.
Conformational R i g i d i t y X, angle 0° ( i n Z), 120° ( i n E)
Conservative replacement.
Potential inhibitor for metal loproteases.
S i m p l i f i c a t i o n , maintain receptor a f f i n i t y
Maintenance of side chain topology.
flexibility
Effect
Increased
[Degree of protease resistance = Xs]
X
X
X
XXX
XX
XXX
Proteolytic Resistance
Amide bond and amino a c i d s u b s t i t u t i o n s which c o n f e r p r o t e o l y t i c r e s i s t a n c e and v a r y i n g c o n f o r m a t i o n a l and p h y s i c a l p r o p e r t i e s on p e p t i d e s .
NH of amide
aC-R
CO of amide
n
[Xxx] Y y
/fC^ix H2C CH2
n
CONH
NHCO
2
CONH
Replaced Substituent
CH S
Replacing Substituent
Peptide Mimetics
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
o S3
^ £j g el
w
^ ^
>
o jS £
o 2
P
w
o
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
3.
EDWARDS ETAL.
1.
NH CHCH OH • 2
2
( B 0 C )
2°
>Boc-NHCHCH OHI CH(CH ) 2
L
CH(CH )
3 2
NOBr
2
6
2
2
(R)-phenylalanine
2
2
3 2
•HSCHC0 H CH C H
5
2
CH
2
6
5
(S)-2-mercapto3-phenyl propanoic acid
(R)-2-bromo-3phenyl-propanoic acid
Boc~NHCHCH OTs + HSCH-C0 H CH(CH )
6
2
2
L
5
->Boc~NHCHCH OTs I CH(CH ) 3 2
Na CS3
-> BrCHCOoH I CH C H
2
CH C H
TsCI pyridine
3 2
NH CHC0 H 2
41
Naturally Occurring Cyclic Peptides
-> Boc-NH-CHCHoSCHC0 H 2
CH(CH ) C H 3 2
2
B o c - L - V a l ^ t C H S ] L-Phe-OH I 2
Scheme 1
S y n t h e s i s o f t h e p s e u d o d i p e p t i d e Boc-Val[CH2S]Phe-0H.
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
42
BIOLOGICALLY ACTIVE NATURAL PRODUCTS
o f a - m e r c a p t o p h e n y l a l a n i n e , a c o u p l i n g r e a c t i o n was performed i n d i m e t h y l s u l f o x i d e . The r e a c t i o n gave Boc-Val¥[CH2S]Phe-0H i n 46% y i e l d ; t h i s analog i s a potent i n h i b i t o r of l e t t u c e r o o t s ( J . V . Edwards, u n p u b l i s h e d r e s u l t s ) . T h i s a n a l o g , however f a i l e d t o e x e r t a h e r b i c i d a l e f f e c t i o n on m o r n i n g g l o r y and b a r n y a r d g r a s s , although an a u x i n - l i k e response was observed with m o r n i n g g l o r y ( J . V . Edwards and D. C a r l s o n , u n p u b l i s h e d r e s u l t s ) .
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
Retro-Inverso
Modifications
In r e t r o - i n v e r s o m o d i f i e d analogs of p e p t i d e s , t h e d i r e c t i o n of t h e amide bonds i n t h e backbone has been r e v e r s e d but t h e t h r e e d i m e n s i o n a l o r i e n t a t i o n of t h e s i d e c h a i n s i s m a i n t a i n e d ( 2 5 , 2 6 ) . The R u s s i a n group headed by Shemyakin u t i l i z e d r e t r o - i n v e r s o analogs i n t h e development of a topochemical approach t o t h e study of s t r u c t u r e - a c t i v i t y r e l a t i o n s h i p s i n p e p t i d e systems ( 2 7 ) . Their s t u d i e s d e a l t w i t h c y c l i c p e p t i d e s and d e p s i p e p t i d e s , n o t a b l y G l y , Glyl-O-gramicidin j e n n i a t i n a n t i b i o t i c s . I n v e r s i o n of each c h i r a l c e n t e r (and concomitant r e v e r s a l o f the p e p t i d e backbone) r e s u l t e d i n enantiomers e x h i b i t i n g e x a c t l y t h e same b i o l o g i c a l activity. S i m i l a r s t u d i e s have d e a l t w i t h l i n e a r b i o a c t i v e p e p t i d e s . F o r example, a l l D - r e t r o - b r a d y k i n i n (28) and an a l l D - r e t r o analog of a m e l a n o c y t e - s t i m u l a t i n g (MSH) p e p t i d e (29) have been s y n t h e s i z e d . However, t h e o r i g i n a l s p a t i a l o r i e n t a t i o n of a l l s i d e chains i n t h e analogs was not r e t a i n e d s i n c e t h e C- and N - t e r m i n i were r e v e r s e d . The end-group problem can be circumvented by replacement of t h e C - t e r m i n a l amino a c i d r e s i d u e by a 2 - a l k y l m a l o n y l r e s i d u e and t r a n s f o r m a t i o n of t h e N - t e r m i n a l r e s i d u e i n t o a gem-diaminoalkyl residue (26,29). Goodman and coworkers have conducted a number of s t u d i e s on p a r t i a l l y - m o d i f i e d , r e t r o - i n v e r s o analogs o f b i o l o g i c a l l y a c t i v e p e p t i d e s i n which a s e l e c t e d p e p t i d e bond i s r e v e r s e d through t h e i n c o r p o r a t i o n of gem-diaminoalkyl and 2 - a l k y l m a l o n y l d e r i v a t i v e s . (26). Much of t h e research has d e a l t w i t h p a r t i a l l y m o d i f i e d r e t r o - i n v e r s o analogs of t h e l u t e i n i z i n g h o r m o n e - r e l e a s i n g hormone (LH-RH) (30) and e n k e p h a l i n s ( 3 1 - 3 3 ) . In many i n s t a n c e s , t h e analogs have e x h i b i t e d enhanced b i o l o g i c a l a c t i v i t y and i n c r e a s e d s t a b i l i t y toward enzymatic d e g r a d a t i o n ( 3 1 , 3 2 ) . The h e r b i c i d a l l y a c t i v e p e p t i d e t e n t o x i n i s an i n t e r e s t i n g model f o r i n c o r p o r a t i o n of t h e r e t r o - i n v e r s o m o d i f i c a t i o n . C o n f o r m a t i o n a l p r o p e r t i e s are a s s o c i a t e d with c h l o r o s i s i n d u c t i o n and a p r o t e o l y t i c a l l y r e s i s t a n t p e p t i d e bond may enhance t h e b i o l o g i c a l a c t i v i t y of the n a t u r a l l y occurring t o x i n . 5
s
a n (
S y n t h e s i s of a R e t r o - i n v e r s o M o d i f i e d Analog of T e n t o x i n S t u d i e s were c a r r i e d out on a s y n t h e s i s of d i a s t e r e o m e r s of c y c l o [R,S-mLeu-N(CH3)A Phe-Gly-gAla] (compound 2 i n Scheme 2) wherein t h e amide bond of t h e d i p e p t i d e u n i t A l a - L e u i s r e v e r s e d . The p r e f i x m denotes t h e malonic a c i d d e r i v a t i v e of t h e analogous amino a c i d and t h e p r e f i x g denotes t h e gem-di ami n o - a l k y 1 d e r i v a t i v e of t h e c o r r e s p o n d i n g amino a c i d ( 3 0 - 3 3 ) . The t - b u t y l monoester of i s o b u t y l m a l o n i c a c i d , ( 3 ) , m a l o n i c a c i d analog of l e u c i n e was prepared (Scheme 2 ) . D i e t h y l i s o b u t y l m a l o n a t e z
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
3.
EDWARDS ET AL.
Naturally Occurring Cyclic Peptides
43
was prepared i n 74% y i e l d i n accordance w i t h t h e l i t e r a t u r e method (35). Treatment w i t h IN e t h a n o l i c KOH i n acetone a f f o r d e d t h e monoester ( 3 2 ) . R e a c t i o n with t - b u t a n o l and DCC i n t h e presence of 4 - d i m e t h y l ami nopyri d i ne (DMAP) a f f o r d e d t h e t - b u t y l e t h y l d i e s t e r i n 76% y i e l d which was s e l e c t i v e l y h y d r o l y z e d t o 3 w i t h IN NaOH (aqueous) i n m e t h a n o l . There was no r e a c t i o n upon treatment o f t h e d i e s t e r with IN e t h a n o l i c KOH i n a c e t o n e . R e a c t i o n of 3 w i t h N - h y d r o x y s u c c i n i m i d e (HOSu) i n t h e presence of DCC (32) p r o v i d e d t h e N - h y d r o x y s u c c i n i m i d e e s t e r 4 which was o b t a i n e d i n 56% y i e l d upon r e c r y s t a l l i z a t i o n from i s o p r o p a n o l . R e a c t i o n of 4 w i t h d , l - 3 p h e n y l s e r i n e e t h y l e s t e r (5, o b t a i n e d from t h e £ - t o l u e n e s u l f o n a t e s a l t ) (35) i n t h e presence of 1 - h y d r o x y b e n z o t r i a z o l e (HOBt) p r o v i d e d 6 i n 69% y i e l d . Attempts t o prepare 6 from 3 and 5 by t h e mixed a n h y d r i d e method (35) gave poor (25% o r l e s s ) . S e l e c t i v e s a p o n i f i c a t i o n of 6 a f f o r d e d t h e a c i d 7 i n 94% y i e l d . Treatment of 7 w i t h excess a c e t i c anhydride i n t h e presence of sodium a c e t a t e (35) e f f e c t e d s t e r e o s e l e c t i v e d e h y d r a t i o n forming t h e a z l a c t o n e of t-BuO-R,S-mLeu-A Phe (8) i s o l a t e d i n 96% y i e l d as a yellow o i l . R e a c t i o n o f 8 w i t h a 20% excess of t h e d i p e p t i d e H-Gly-Ala-OMe (prepared as shown i n Scheme 3) i n r e f l u x i n g e t h y l a c e t a t e f u r n i s h e d t h e t e t r a p e p t i d e t-BuO-R,S-mLeu-A Phe-Gly-Ala-OMe 9. Flash chromatography of t h e crude product a f f o r d e d unreacted 8 (23% r e c o v e r y ) and 9 i n 54% y i e l d (71% based upon recovered s t a r t i n g material). Compound 9 was s e l e c t i v e l y N-methylated at d e h y d r o p h e n y l a l a n i n e by t r e a t m e n t w i t h excess K2CO3 and iodomethane i n t h e presence of a c a t a l y t i c amount of 18-crown-6 (35) t o p r o v i d e 10 i n 98% y i e l d . T e n t o x i n i t s e l f a l s o c o n t a i n s an N - m e t h y l a l a n i n e m o i e t y . However, t h e second N-methyl group has l i t t l e or no e f f e c t on b i o l o g i c a l acti v i t y . The c o n v e r s i o n of the a l a n i n e r e s i d u e of 10 t o i t s gem-diamino d e r i v a t i v e was e f f e c t e d by treatment of 10 w i t h l i q u i d ammonia i n methanol with s e l e c t i v e f o r m a t i o n of t h e amide 11 i n 93% y i e l d . Treatment of 11 w i t h [ b i s ( t r i f 1 u o r o a c e t o x y ) i o d o ] benzene (TIB) i n 75% a c e t o n i t r i l e / w a t e r (36,32,32,33) a f f o r d e d t h e amine s a l t 12 i n 43% y i e l d f o l l o w i n g work-up. The use of TIB i n t h e c o n v e r s i o n of amides t o amines o f f e r s a s i g n i f i c a n t improvement over e a r l i e r methods i n v o l v i n g t h e Hofmann rearrangement, C u r t i u s rearrangement, or Schmidt r e a c t i o n . In p r e p a r a t i o n of the f i n a l c y c l i z a t i o n s t e p , t h e t - b u t y l e s t e r 12 was d e p r o t e c t e d with 40% t r i f l u o r o a c e t i c a c i d / d i c h l o r o r n e t h a n e , p r o v i d i n g t h e a c i d 13 i n q u a n t i t a t i v e y i e l d . Compound 13 was t r e a t e d w i t h t r i e t h y l amine i n DMF at -20°C u n t i l t h e pH reached 8 . Thereupon, 1.2 e q u i v a l e n t s of d i p h e n y l p h o s p h o r y l a z i d e (DPPA), 1 e q u i v . HOBt, and 0.1 e q u i v . DMAP were added and the m i x t u r e was s t o r e d at - 5 ° f o r f o u r days ( 3 5 ) . I s o l a t i o n of t h e n e u t r a l product a f f o r d e d t h e r e t r o - i n v e r s o m o d i f i e d analog 2 i n 41% y i e l d . Treatment of l e t t u c e seedlings with 2 r e s u l t e d i n nearly equivalent b i o l o g i c a l a c t i v i t y t o t h e parent analog (23) at c o n c e n t r a t i o n s of 100 yM and 10 yM. F u l l c h l o r o s i s i s m a i n t a i n e d at 100 yM (O.D. D a i l e y and J . V . Edwards, u n p u b l i s h e d r e s u l t s ) . z
z
Cutler; Biologically Active Natural Products ACS Symposium Series; American Chemical Society: Washington, DC, 1988.
BIOLOGICALLY ACTIVE NATURAL PRODUCTS
CH2 (C02 C2H5 )2
(CH3)2 CHCH2 B r
C2HsONa C2HS0H.A 74* 1
Downloaded by UNIV OF MASSACHUSETTS AMHERST on June 3, 2018 | https://pubs.acs.org Publication Date: November 28, 1988 | doi: 10.1021/bk-1988-0380.ch003
( C H 3 )2CHCH2CH(C02C2H5 ) 2
(CH3 )2 CHCH2CH(CO2 C2 Hs)(CO2 H)
t
j^-BuOH,
DCC OoC-HRT* 76%
CH2CI2, 1
(CH3 )2CHCH2CH(C02C2H5 )(C02t-Bu)
(CH3 )2CHCH2CH(C02t-Bu)(C02H)
N KOH (EtOH) Acetone *" 96%
N NaOH MeOH 87%
HOSu,
DCC.THF
3
O
H
O
56%