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Flexible Method for Conjugation of Phenol Lignin Model Compounds to Carrier Proteins Ruili Gao, Fachuang Lu, Yimin Zhu, Michael G. Hahn, and John Ralph J. Agric. Food Chem., Just Accepted Manuscript • DOI: 10.1021/acs.jafc.6b04273 • Publication Date (Web): 03 Oct 2016 Downloaded from http://pubs.acs.org on October 4, 2016
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Journal of Agricultural and Food Chemistry
Flexible Method for Conjugation of Phenolic Lignin Model Compounds to Carrier Proteins
Ruili Gao,*,a,b Fachuang Lu,a,b Yimin Zhu,c Michael G. Hahn,d and John Ralph*,a,b a
Department of Biochemistry, University of Wisconsin-Madison, Madison, WI, 53706, USA. email:
[email protected] b
DOE Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin-Madison, Madison, WI 53726, USA. email:
[email protected] c
Department of Chemistry, The Pennsylvania State University, Altoona College 3000 Ivyside Park, Altoona, PA 16601, USA
d
Complex Carbohydrate Research Center, The University of Georgia, Athens, Georgia 30602, US
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ABSTRACT
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Linking lignin model compounds to carrier proteins is required in order either to raise
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antibodies to them or to structurally screen antibodies raised against lignins or models. We
4
describe a flexible method to link phenolic compounds of interest to cationic bovine serum
5
albumin (cBSA) without interfering with their important structural features. With the
6
guaiacylglycerol-β-guaiacyl ether dimer, for example, the linking was accomplished in
7
89% yield with the number of dimers per carrier protein being as high as 50; NMR
8
experiments on a 15N- and 13C-labeled conjugation product indicated that 13 dimers were
9
added to the native lysine residues and the remainder (~37) to the amine moieties on the
10
ethylenediamine linkers added to BSA; ~32% of the available primary amine groups on
11
cBSA were therefore conjugated to the hapten. This loading is suitable for attempting to
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raise new antibodies to plant lignins and for screening.
13 14
KEYWORDS: lignin model dimer, lignification, antibody, cBSA-conjugation, NMR
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INTRODUCTION
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Lignification, although crucial to plant growth and development, is a prime factor limiting
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the utilization of cell walls in agriculturally important plants in processes such as ruminant
18
digestibility and biomass feedstock conversion to liquid biofuels. Improving our
19
understanding of the complex lignin polymer structure becomes important both in
20
designing pretreatments to provide access to wall polysaccharides and in engineering
21
plants to minimize the recalcitrance caused by lignins.1-17 Over the past decade,
22
considerable research has focused on the compatibility of non-traditional lignin monomer
23
(monolignol) components available during lignin polymerization,1,18-23 and on the
24
structural attributes of the resulting polymer that incorporate novel monomers throughout
25
cell wall development. Antibodies against lignin substructures have become effective tools
26
for delineating the in planta distributions of various components, for clarifying the
27
mechanisms of lignification in the plant cell wall, and for potentially giving new
28
information that cannot be obtained by chemical degradative and other analytical
29
methods.24-39 In immunological studies, a particular compound can be surveyed and
30
characterized according to the selectivity of an antigen-antibody reaction. The application
31
of polyclonal antibodies raised against pure guaiacyl and mixed guaiacyl-syringyl
32
synthetic lignins (DHPs or dehydrogenation polymers) has helped illustrate the lignin
33
guaiacyl and mixed guaiacyl-syringyl profile and how it is influenced by various genetic
34
perturbations.31-35 A polyclonal antibody raised from a synthetic DHP polymer directed
35
specifically against syringyl units has also been reported.36
36
To date, few immunological probes for lignin have been developed. Antibodies can be
37
raised directly to synthetic lignins or carefully selected isolated lignins. This is the basis of
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the fairly successful polyclonal antibodies raised to synthetic guaiacyl (G) and syringyl (S)
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lignins. Antibodies can also be raised to synthesized model compounds for either the
40
prominent or the more minor recognized interunit bonding structures in native lignins.
41
Successful polyclonal antibodies have been raised to a dibenzodioxocin model, for
42
example.37 Recently, monoclonal antibodies toward some lignin-related phenolics such as
43
p-coumarates were generated.38 Monoclonal antibodies generated against
44
dehydrodiconiferyl alcohol were used to localize β–5- or β–β-linked lignin structures in
45
plant cell walls.39 The availability of such antibodies has been a boon to the lignin
46
research community, finding uses in wide-ranging studies, but the range of such
47
antibodies for recognizing diverse and well-characterized structural epitopes in lignins is
48
limited.
49
In the case of low-molecular-mass dimers or oligomers, they must be non-disruptively
50
linked to a carrier protein, in order to raise and screen the antibodies, via means that will
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not obliterate the structural features that need to be recognized. It therefore becomes
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particularly important to find a method to load the low-molecular-mass lignin model
53
compounds onto a carrier protein. There are two methods reported. The primary method
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reacts the amine group from lysine units in the protein with p-AHA (p-aminohippuric
55
acid), converts the product aromatic amines to diazonium ions via treatment with NaNO2,
56
and reacts these with phenolic models, with the addition (electrophilic aromatic
57
substitution) occurring ortho to the phenol.40 This alters the substitution on the aromatic
58
ring and also has the obvious limitation that it can not be used for syringyl units that are
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already substituted at both positions ortho to the phenol. The requirement for two steps
60
involving the protein provides a challenge to characterizing the products. More
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importantly, there are only 60 lysines in standard BSA,41 some 30-35 of which are
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accessible for coupling reactions. The amount of hapten loading to the carrier protein is
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therefore typically ~20 per protein. A second method was used to raise polyclonal
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antibodies to the relatively recently discovered dibenzodioxocin units in lignins. A
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dibenzodioxocin model compound in which (non-native) carboxylic acids had been
66
introduced into the side-chains was added to the carrier protein by the coupling reaction of
67
the carboxylic acid with the lysine amine. However, the conjugation of the
68
dibenzodioxocin model to BSA resulted in precipitation and only 6% was conjugated in
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30% protein yield. Although carboxylic acids could, in principle, be introduced into side-
70
chains of most lignin model compounds, the non-standard nature of these models and the
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potential disruption of the recognition of native lignin structures limits the general
72
usefulness of this approach. However, the methodology used37 provides the basis
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procedure for our method.
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The goal of our research here was to develop a flexible method that can be widely
75
used for the conjugation of lignin model compounds to a carrier protein, with high loading
76
of hapten. For our purposes, it was essential to establish the efficacy of the reactions
77
involved, and thus to find a way to characterize the protein conjugates.
78 79
MATERIALS AND METHODS
80
General
81
All organic substrates and solvents were purchased from commercial sources and used
82
without further purification. Commercial cBSA was obtained from Fisher Scientific.
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Flash-chromatography was performed with Biotage snap silica cartridges on an Isolera
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One (Biotage, Charlottesville, VA). NMR spectra were acquired on a Bruker Biospin
85
(Billerica, MA) AVANCE 500 MHz and 700 MHz spectrometers equipped with a 5 mm
86
cryogenic TCI 1H/13C/15N (500) or QCI 1H/31P/13C/15N (700) gradient probe with inverse
87
geometry (proton coil closest to the sample). Spectral processing was performed using
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Bruker’s Topspin 3.1 (Mac) software. The central solvent peaks were used as internal
89
reference
90
implementations of 1D and 2D [gradient-selected correlation spectroscopy (COSY),
91
heteronuclear single-quantum coherence (HSQC), and heteronuclear multiple-bond
92
correlation (HMBC)] NMR experiments were used for routine structural assignments of
93
newly synthesized compounds. Dialysis was performed by using slide-A-Lyzer™ dialysis
94
cassette (10,000 MWCO, 3-12 mL capacity). MALDI-TOF MS was measured by Applied
95
Biosystems/MDS SCIEX 4800 MALDI TOF/TOF with OPtiBeamTM on-axis laser as
96
source.
(δH/δC:
acetone-d6, 2.04/29.84;
D2O,
4.79).
The
standard
Bruker
97 98
Preparation of cBSA
99
BSA (6 mg) was dissolved in 1.0 mL MES buffer (0.1 M, pH 4.7) and this solution was
100
slowly added to 1.0 mL ethylenediamine dihydrochloride (1 M in 0.1 M MES, pH 4.7).
101
Then 4 mg 1-ethyl-3-(dimethylaminopropyl)-carbodiimide (EDC) was added and the
102
mixture was stirred at room temperature for 6 h during which time another 8 mg EDC in
103
two 4 mg aliquots at 2 h intervals was added. The reaction solution was then dialyzed
104
against PBS buffer (0.02 M sodium phosphate, 0.15 M NaCl, pH 7.4) and lyophilized.
105 106
Study of cBSA yield dependency on the amount of EDC
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A set of experiments was performed. (a) BSA (6 mg) was dissolved in 1.0 mL MES buffer
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(0.1 M, pH 4.7) and this solution was slowly added to 1.0 mL ethylenediamine
109
dihydrochloride (1 M in 0.1 M MES, pH 4.7). Then 4 mg EDC was added and the mixture
110
was stirred at room temperature for 2 h. The reaction solution was then dialyzed against
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PBS buffer (0.02 M sodium phosphate, 0.15 M NaCl, pH 7.4) and lyophilized. (b) BSA (6
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mg) was dissolved in 1.0 mL MES buffer (0.1 M, pH 4.7) and this solution was slowly
113
added to 1.0 mL ethylenediamine dihydrochloride (1 M in 0.1 M MES, pH 4.7). Then 4
114
mg EDC was added and the mixture was stirred at room temperature for 4 h during which
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another 4 mg aliquot EDC was added at 2 h intervals was added. The reaction solution
116
was then dialyzed against PBS buffer (0.02 M sodium phosphate, 0.15 M NaCl, pH 7.4)
117
and lyophilized. (c) BSA (6 mg) was dissolved in 1.0 mL MES buffer (0.1 M, pH 4.7) and
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this solution was slowly added to 1.0 mL ethylenediamine dihydrochloride (1 M in 0.1 M
119
MES, pH 4.7). Then 4 mg EDC was added and the mixture was stirred at room
120
temperature for 6 h during which another 8 mg two 4 mg aliquot EDC was added at 2 h
121
intervals. The reaction solution was then dialyzed against PBS buffer (0.02 M sodium
122
phosphate, 0.15 M NaCl, pH 7.4) and lyophilized.
123 124
Model compounds
125
The model compounds in Figure 1 were all synthesized by standard methods. The β-ether
126
dimeric models 1a and 2a, were prepared as previously.42 Dehydrodiconiferyl alcohol (3a,
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β–5) was synthesized via 8–5-coupled dehydrodiferulate,43 followed by reduction of the
128
esters with DiBAL-H,44 as described for this exact compound in the Supplementary
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Information in a previous report.45 Syringaresinol (4a, β–β) was produced via the radical
130
coupling of sinapyl alcohol.46
131 132
Phenol etherification and acid introduction to produce the hapten required for
133
conjugation
134
The conjugation reaction is illustrated with the β-ether model 1a to produce compound 1b
135
(Figure 2). The β–O–4-dimer (1a, 96 mg, 0.3 mmol) and 55 mg (0.33 mmol) ethyl
136
bromoacetate were dissolved in 10 mL acetone and then 207 mg (1.5 mmol) K2CO3 was
137
added to the solution. The mixture was stirred overnight, after which solids were filtered
138
off and the solvent was evaporated. The crude product was dissolved in 10 mL 95%
139
ethanol and 0.5 mL 1 M NaOH was added. After stirring for 2 h, the solution was
140
acidified to pH ~1, checked using a 0-2 range pH test kit, with 1 M HCl and extracted with
141
ethyl acetate. The organic layer was washed with satd. NaCl solution and dried over
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MgSO4. The solvent was evaporated and the crude product was purified over 50 g silica-
143
gel column by flash chromatography (CH2Cl2/MeOH/AcOH = 9:1:0.1%, v/v/v) to give
144
100 mg product 1b (yield 89%). Under the same conditions, the other lignin model
145
compounds (Figure 1) were successfully produced to the haptens for the conjugation with
146
83-87% yields. The haptens were characterized by 1D and 2D NMR.
147 148
Compound 1b. 1H NMR (acetone-d6) δ (ppm): 3.48 and 3.68 (2H, m, Hγ), 3.81 (3H, s, A-
149
OCH3), 3.85 (3H, s, B-OCH3), 4.20 (1H, m, Hβ), 4.67 (2H, S, CH2), 4.91 (1H, m, Hα),
150
6.85 (1H, m, B-H6), 6.90 (1H, d, J = 8.43 Hz, A-H5), 6.93-6.98 (2H, m, B-H1 and B-H5),
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6.99 (1H, m, B-H2), 7.15 (1H, dd, J = 8.43 and 1.60 Hz, A-H6), 7.16 (1H, d, J = 1.60 Hz,
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A-H2). 13C NMR (acetone-d6) δ (ppm): 56.12 (B-OCH3), 56.26 (A-OCH3), 61.83 (Cγ),
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66.73 (CH2CO), 73.58 (Cα), 88.28 (Cβ), 112.03 (A-C2), 113.34 (B-C2), 115.06 (A-C5),
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119.78 (A-C6 and B-C5), 121.93 (B-C6), 123.46 (B-C1), 136.56 (A-C1), 147.95 (A-C4),
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149.63 (B-C4), 150.57 (A-C3), 151.76 (B-C3) and 170.41 (CO).
156 157
Compound 2b. 1H NMR (acetone-d6) δ (ppm): 2.27 (3H, S, CH3), 3.34 and 3.41 (2H, m,
158
Hγ), 3.84 (12H, s, OCH3), 4.20 (1H, m, Hβ), 4.50 (2H, S, CH2), 5.00 (1H, m, Hα), 6.53
159
(2H, B-H3), 6.81 (2H, A-H2). 13C NMR (acetone-d6) δ (ppm): 21.74 (CH3), 56.45
160
(OCH3), 61.53 (Cγ), 70.62 (CH2CO), 73.84 (Cα), 88.89 (Cβ), 104.98 (B-C3/C5), 107.01
161
(A-C2/C6), 134.62 (B-C4), 134.78 (A-C1), 136.19 (B-C1), 139.10 (A-C4), 152.89 (B-C2),
162
153.53 (A-C3) and 170.53 (CO).
163 164
Compound 3b. 1H NMR (acetone-d6) δ (ppm): 3.52 (2H, CH2), 3.80 (3H, s, B-OCH3),
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3.85 (3H, s, A-OCH3), 3.88 (1H, m, Hβ), 3.91 (2H, CH2OH), 4.68 (2H, S, CH2), 5.60 (1H,
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d, J = 6.77 Hz Hα), 6.24 (1H, ddd, J = 17.53, 7.3, 7.3, CH), 6.54 (1H, d, J = 17.53, CH),
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6.90-6.96 (4H, A-H2 A-H6, A-H5, and B-H2) ), 7.07 (2H, B-H6). 13C NMR (acetone-d6)
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δ (ppm): 54.76 (Cβ), 56.23 (OCH3), 63.37 (CH2CH), 64.59 (Cγ), 66.43 (CH2CO), 88.17
169
(Cα), 111.21 (A-C2), 115.14 (B-C2), 116.30 (A-C5), 118.80 (B-C6), 128.27 (A-C6),
170
130.55 (B-C5), 131.97 (B-C1), 136.88 (A-C1), 145.14 (B-C3), 148.81(A-C3), 150.65 (A-
171
C4) and 170.41 (CO).
172 173
Compound 4b. 1H NMR (acetone-d6) δ (ppm): 3.18 (2H, m, Hβ), 3.81 (12H, s, OCH3),
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4.23 (4H, m, Hγ), 4.49 (2H, S, CH2), 4.71 (2H, m, Hα), 6.67 (4H, d, J = 1.60 Hz, A-
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H2/H6 and B-H2/H6). 13C NMR (acetone-d6) δ (ppm): 55.76 (Cβ), 56.61 (OCH3), 72.41
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(Cγ), 69.65 (CH2CO), 86.2 (Cα), 104.2 (A-C2 and B-C2), 133.21 (C1), 136.32 (B-C4),
177
148.21 (A-C4), 153.81 (A-C3/B-C3) and 170.91 (CO).
178 179
Reaction of model compound 1b with N-α-carbobenzoxy-L-lysine methyl ester
180
hydrochloride and characterization of the product 1c
181
L-Lys-OMe·HCl
182
and 125 mg model compound 1b (0.33 mmol) was dissolved in 2 mL THF. The latter
183
solution was slowly added to the lysine solution under stirring. Then 57 mg EDC (0.3
184
mmol) was added to the mixture. After stirring at room temperature for 6 h, the mixture
185
was extracted with ethyl acetate and dried over MgSO4. The crude product was purified by
186
flash chromatography (n-hexanes/EtOAc) to give 160 mg product 1c (yield 82%).
(100 mg, 0.3 mmol) was dissolved in 6 mL THF/0.1M MES buffer (1:2),
187 188
Compound 1c. 1H NMR (acetone-d6) δ (ppm): 1.42 (2H, m, H11), 1.53 (2H, m, H10), 1.76
189
(2H, m, H12), 3.27 (2H, m, H9), 3.48 and 3.68 (2H, m, Hγ), 3.66 (3H, s, C15H3), 3.81
190
(3H, s, A-OCH3), 3.85 (3H, s, B-OCH3), 4.17 (1H, m, NCH), 4.20 (1H, m, Hβ), 4.42 (2H,
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s, C7H2), 4.94 (1H, m, Hα), 5.06 (2H, s, CH2Ph), 6.67 (1H, d, J = 7.34 Hz, HNC13), 6.85
192
(1H, m, B-H6), 6.90 (1H, d, J = 8.43 Hz, A-H5), 6.93-6.98 (2H, m, B-H1 and B-H5), 6.99
193
(1H, m, B-H2), 7.15 (1H, dd, J = 8.43 and 1.60 Hz, A-H6), 7.16 (1H, d, J = 1.60 Hz, A-
194
H2), 7.43 (1H, t, J = 5.43 Hz, HNC8). 13C NMR (acetone-d6) δ (ppm): 23.69 (C11), 29.83
195
(C10), 31.94 (C12), 38.84 (C9), 52.23 (C15), 54.98 (C13), 56.12 (B-OCH3), 56.26 (A-
196
OCH3), 61.83 (Cγ), 66.73 (CH2Ph), 70.54 (C7), 73.58 (Cα), 88.04 (Cβ), 112.03 (A-C2),
197
113.34 (B-C2), 116.29 (A-C5), 119.78 (A-C6 and B-C5), 121.93 (B-C6), 123.46 (B-C1),
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128.65 (C-C2), 129.20 (C-C4), 129.27 (C-C3), 137.34 (A-C1), 138.14 (C-C1), 147.81 (A-
199
C4), 149.55 (B-C4), 150.57 (A-C3), 151.76 (B-C3), 157.10 (NCO), 168.90 (C8) and
200
173.66 (C14). HR-MS (ESI) calcd for C34H42N2O11 [(M + H)+]: 655.2862; found:
201
655.2858.
202 203
Conjugation to cBSA or BSA
204
The procedure is illustrated for compound 1b. Hapten 1b (10 mg) was dissolved in 1.0 mL
205
THF and then added 0.5 mL MES buffer (0.1 M, pH 4.7). This solution was added
206
dropwise to 1.0 mL cBSA or BSA solution (10 mg cBSA or BSA in 1.0 mL 0.1 M MES
207
buffer, pH 4.7), and then 5 mg EDC was added to this mixture. The conjugate solution
208
was allowed to react for 2 h at room temperature. The reaction mixture was dialyzed
209
against 2 L PBS buffer (pH 7.4) for 6 h in 2 h intervals and then 2 L water for 4 h in 2 h
210
intervals, and finally lyophilized. The other conjugations of haptens to cBSA or BSA were
211
performed under the same conditions.
212 213
Preparation of 15N/13C-labeled conjugate sample for 3D HNCO NMR
214
The coupling product of the β–O–4-dimer 1a with ethyl bromoacetate (13C-labeled on CO)
215
was hydrolyzed by 1 M NaOH in 95% ethanol solution. After purification the 13C-labeled
216
hapten 1b was collected in 89% yield. 15N-labeled cBSA was synthesized from the
217
conjugation of 15N-labeled ethylenediamine to BSA by the same protocol as for making
218
cBSA. The conjugation of 13C-labeled hapten 1b to 15N-labeled cBSA was performed
219
following the typical protocol.
220
The NMR sample contained PBS buffer (20 mM sodium phosphate, 150 mM NaCl,
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pH 7.4), 8% D2O (v/v), 50 µM 4,4-dimethyl-4-silapentane-1-sulfonic acid (DSS). DSS
222
was used as an internal reference. NMR data were collected at the National Magnetic
223
Resonance Facility at Madison (NMRFAM). NMR spectra were acquired at 25 °C using a
224
600 MHz Varian Unity-Inova spectrometer equipped with a z-gradient cryogenic probe.
225
3D acquisition used 64 increments in the 15N dimension and 64 increments in the 13C
226
dimension with 16 scans for each increment. TimeTN, the transfer delay to detect the
227
weak three-bond 3JNC' correlation across H-bonds between the amide N and the carbonyl C
228
was set to 66.5 ms.47,48 Sparky was used for data analysis.49
229 230
RESULTS AND DISCUSSION
231 232
Preparation and characterization of cBSA
233
Bovine serum albumin (BSA) has 60 Lys residues, along with 40 Asp and 59 Glu residues
234
that bear carboxylate sidechain groups that can be converted to further new primary
235
amines with ethylenediamine to increase the number of conjugatable primary amine
236
groups on the protein, as well as the net charge or pI, producing cationic bovine serum
237
albumin (cBSA). The highly positive charge on cBSA increases its immunogenicity, and
238
cBSA used as a carrier protein induces a similar increase in the production of antibodies
239
against any attached haptens.50-52 Here we modify the typical protocol by addition of EDC
240
at 2 h intervals (see Experimental Section) to generate a more uniform cBSA with a high
241
conversion of native carboxylic acid groups to amines, a product that is more suitable for
242
our purposes.53
243
The amount of ethylenediamine covalently added to BSA was evaluated by MALDI-
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TOF MS using sinapic acid as a matrix. Figure 3A shows the MALDI-TOF MS spectra of
245
BSA (top), cBSA from our protocol (middle), and commercial cBSA (bottom). The
246
molecular weights, estimated from the spectra, were approximately 66,658, 70,921, and
247
69,841. Obviously, the difference in molecular weight between a cBSA preparation and
248
the BSA parent corresponds to the mass of covalently bound ethylenediamine, i.e., the
249
ethylenediamine on BSA loading. From the MALDI-TOF MS spectra, our protocol can
250
generate cBSA with a loading of ~100 ethylenediamines; from the number of Asp and Glu
251
units in BSA (99 units), this is therefore an ~100% yield on the protein with 98% purity.
252
By comparison, the purchased commercial cBSA contained only 76 ethylenediamines
253
with ~60% purity. cBSA therefore contains the same level of lysine (60 units) as standard
254
BSA but contains a further 100 primary amines as a result of adding ethylenediamine to
255
the carboxylic acid groups. As a consequence, there are ~160 primary amines on cBSA
256
that can react with a carboxylic acid group on a hapten.
257
To investigate the effect of EDC additions on the yield of cBSA, a set of experiments
258
was performed by adjusting the amount of EDC added to the reaction mixture. Figure 3B
259
demonstrates the molecular weights of cBSA resulting from adding a different number of
260
aliquots (and different amounts) of EDC. The molecular weight of cBSA prepared
261
following the typical protocol by adding 4 mg EDC was 68,842 (top) which, when
262
compared to the molecular weight of BSA at 66,658, indicates that this cBSA contains 52
263
ethylenediamines. The middle spectrum in Figure 3B shows that a cBSA with a molecular
264
weight of 70,104 was generated by adding 8 mg EDC in two 4 mg aliquots at 2 h intervals,
265
corresponding to 82 added ethylenediamines. The bottom spectrum in Figure 3B shows
266
that ~100 of the carboxylic acid groups in BSA reacted with ethylenediamine to form
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cBSA with a molecular weight of 70,921 after adding 12 mg EDC in three 4 mg aliquots
268
at 2 h intervals. It is therefore clear that the cationization degree of BSA, and the
269
homogeneity of the product, can be conveniently controlled by adjusting the EDC
270
addition.
271 272
Etherification of the model compound phenol and introduction of a carboxylic acid
273
Our aim was to provide a flexible derivatization method for the phenol in lignin model
274
compounds, etherifying the phenol and therefore mimicking most of the units in the lignin
275
polymer (that are also etherified), and at the same time introducing a new carboxylic acid
276
group. Such model compounds can then conjugate to the carrier proteins via the usual
277
amidation reactions between this carboxylic acid and primary amine groups on the
278
protein.54 With this goal, the hapten 1b was synthesized in 89% yield by adding ethyl
279
bromoacetate to the phenolic β–O–4-dimer 1a, followed by mild saponification. Structural
280
confirmation of the product’s authenticity was by the usual array of 1D and 2D NMR
281
methods. The other models were similarly derivatized, in yields of 83-87%.
282 283 284
Testing the efficacy of conjugation using (protected) lysine as a protein model Before the conjugation of the hapten to the carrier protein was attempted, we assured
285
ourselves that the coupling reaction of the derivatized model 1b with protected lysine was
286
clean and high yielding. The coupling reaction of the model compound 1b and protected
287
lysine (N-α-carbobenzoxy-L-lysine methyl ester hydrochloride) was performed in
288
THF/MES buffer solution to generate the product 1c (Figure 2) in 82% yield after
289
purification by flash chromatography. The product was characterized by 1D and 2D NMR.
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Conjugation of model compounds to cBSA and BSA
292
The conjugation of model compound 1b to the cBSA was performed by the typical
293
protocol and the amount of model compound in its respective conjugates was evaluated by
294
MALDI-TOF MS. Figure 3C shows the MALDI-TOF MS spectra of cBSA (top), and the
295
cBSA conjugated with the β–O–4-dimer model compound 1b (middle). The molecular
296
weights estimated from the spectra were approximately 70,921 and 88,885, indicating that
297
~50 covalently bonded lignin model compound units were on each cBSA. By contrast,
298
only ~13 model dimers were conjugated to BSA (bottom) (representing conjugation to
299
~20% of the lysine units). Under the same conditions, the conjugation scope was
300
expanded by performing the conjugation of the three other lignin model compounds: the
301
syringyl β-aryl ether 2b (β–O–4 S–S), phenylcoumaran (β–5) model 3b and resinols (β–β)
302
model 4b with cBSA with a loading of ~44, ~113 and ~41 molecules of the model
303
compounds per molecule of carrier protein (Figure 3D). Recently, the conjugation of
304
dehydrodiconiferyl alcohol, pinoresinol, and the phenolic β-ether model 1a, to BSA by the
305
p-AHA (p-aminohippuric acid)-BSA method was reported, but the number of covalently
306
bonded lignin model compounds was only ~3-10.39 It has been conjectured, but not firmly
307
established or documented, that having a loading of ~50 model dimers per molecule of
308
carrier protein was ideal; we therefore conjectured that the improved method for
309
producing highly cationized cBSA, and the new method for derivatizing and conjugating
310
models to it, should provide more effective hapten-protein conjugates for use in the
311
process of raising and screening antibodies. This assumption can not be validated here,
312
and a recent paper determined that very high hapten loadings reduced immunogenicity,
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Journal of Agricultural and Food Chemistry
313
albeit not in the BSA system.55 With reproducibility also reported to be an issue,56 the
314
method described here illustrates how to obtain very high loadings, but does not determine
315
the efficacy for monoclonal antibody production which is known to be particularly
316
difficult. Clearly, making lower loadings by simply using lower molar hapten:protein
317
ratios is possible by the same approach as described here.
318
Based on MALDI-TOF MS spectra, there are ~50 model dimers attached to cBSA, but
319
the question remains: where are the model compounds bound to cBSA? In cBSA, there are
320
60 amino groups from lysine and ~100 added primary amines from the ethylenediamine
321
linkers that can bond to the carboxylic acid on the model compound. These 50 model
322
compounds loaded onto cBSA may only bond to native lysines, to amine groups from the
323
added ethylene diamine, or may bond to both. To investigate where the model compounds
324
bond with cBSA, we first performed the conjugation of model compound 1b to BSA
325
under the same conditions as for the conjugation to the cBSA. Figure 3C (bottom) shows
326
that the molecular weight of this conjugation product is 71,421. Comparison with the
327
molecular weight of BSA (66,658) indicates that the number of bonded β–O–4-dimer
328
model compound units on BSA is 13, i.e., on 20% of the lysine units.
329
To confirm that the other dimers (~37 of them) were bonded to the small linker from
330
ethylenediamine, [U-15N]-labeled cBSA was synthesized by using [U-15N]-labeled
331
ethylenediamine, and the β–O–4-dimer model compound 1b was synthesized with a 13C-
332
label on the carbonyl carbon. The conjugation of the 13C-labeled dimer model compound
333
to the [U-15N]-labeled cBSA was performed following the typical protocol and the
334
molecular weight of this conjugation product was evaluated again by MALDI-TOF MS. In
335
addition, a 3D HNCO NMR experiment was performed using the reaction product of
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336
unlabeled BSA, U-15N-labeled ethylenediamine, and 13C-labeled dimer model compound
337
(Figure S1). This triple resonance experiment detects through-backbone connectivities in
338
proteins between 15N and 1HN atoms of one residue together with the carbonyl carbon
339
(13CO) resonance of the preceding residue through 1J(N-H) and 1J(N-CO) coupling
340
constants.57 Only the model compound that is covalently bonded to the linker has 15N-13CO
341
coupling and gives an NMR correlation signal under this experiment. Conversely, any
342
model compound bound directly to BSA (14N-13CO) is not detectable in this experiment.
343
As shown in Figure S1, correlation signals were observed on both a C–H and an N–H
344
plane, indicating that the model compound had indeed conjugated to the labeled linker of
345
the derivatized cBSA. Thus, on the N–H plane (Figure S1b), the signal (8.00/114 ppm)
346
belongs to the 1H–15N connection. Figure S1a shows the signal on the C–H plane, the x-
347
axis is the 1H chemical shift in ppm and the y-axis is 13C chemical shift in ppm. On the C–
348
H plane, there is one signal (1H at 8.00 ppm belonging to 1H–15N and 13C at 174 ppm
349
belonging to 13CO). This signal started at 1H–15N, goes through the 15N–13C bond, and
350
then back through 13C–15N and finally back to 1H. This HNCO NMR data therefore
351
confirms that model compound 1b has indeed linked to cBSA by bonding to the small
352
linker’s primary amine.
353
In summary, we have described herein flexible new methodology to produce protein
354
conjugates of phenolic compounds, at high levels if desired, relevant to lignins in plant
355
cell walls. Such conjugates are useful for both exploring the production of antibodies from
356
protein-hapten conjugates, and for producing the assortment of protein-bound model
357
compounds that are required to screen antibodies for selected activities and to attempt to
358
identify specific recognition epitopes (or at least structural features that are recognized by
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359
such antibodies). These activities are intended to support the production of monoclonal
360
antibodies that will be particularly useful in many areas of plant cell wall research.
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361
ABBREVIATIONS
362
BSA
Bovine serum albumin
363
cBSA
Cationic bovine serum albumin
364
DHP
Dehydrogenation polymer (of monolignols, i.e., a synthetic lignin)
365
MALDI-TOF MS
Matrix-assisted laser desorption/ionization time-of-flight mass
366
spectrometry
367
MES
2-(N-morpholino)ethanesulfonic acid
368
PBS
Phosphate buffered saline
369
EDC
1-Ethyl-3-(dimethylaminopropyl)-carbodiimide
370
DSS
4,4-Dimethyl-4-silapentane-1-sulfonic acid
371 372 373
ACKNOWLEDGEMENT
374
We are grateful to funding provided through the US Department of Energy, the Office of
375
Science (BER DOE-DE-SC0006930).
376 377
SUPPORTING INFORMATION AVAILABLE.
378
This material is available free of charge via the Internet at http://pubs.acs.org.
379 380
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381 382
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Biology 2003, 54, 519-546. (5) Boudet, A. M., Lignins and lignification: Selected issues. Plant Physiol. Biochem. 2000, 38, 81-96. (6) Fu, C.; Mielenz, J. R.; Xiao, X.; Ge, Y.; Hamilton, C. Y.; Rodriguez, M., Jr.; Chen,
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manipulation of lignin reduces recalcitrance and improves ethanol production from
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(9) Li, X.; Chapple, C., Understanding lignification: challenges beyond monolignol biosynthesis. Plant Physiol. 2010, 154, 449-452. (10) Bonawitz, N. D.; Chapple, C., The genetics of lignin biosynthesis: connecting genotype to phenotype. Annu. Rev. Genet. 2010, 44, 337-363. (11) Li, X.; Weng, J. K.; Chapple, C., Improvement of biomass through lignin modification. Plant J. 2008, 54, 569-581. (12) Chapple, C.; Ladisch, M.; Meilan, R., Loosening lignin’s grip on biofuel production. Nat. Biotechnol. 2007, 25, 746-748. (13) Chapple, C.; Carpita, N., Plant cell walls as targets for biotechnology. Cur. Opin. in Plant Biol. 1998, 1, 179-185.
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(14) Chundawat, S. P. S.; Donohoe, B. S.; da Costa Sousa, L.; Elder, T.; Agarwal, U.
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P.; Lu, F.; Ralph, J.; Himmel, M. E.; Balan, V.; Dale, B. E., Multi-scale visualization and
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characterization of lignocellulosic plant cell wall deconstruction during thermochemical
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E.; Engle, N. L.; Katahira, R.; Pu, Y.; Sykes, R.; Chen, F.; Ragauskas, A. J.; Mielenz, J.
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R.; Hahn, M. G.; Davis, M.; Stewart, C. N.; Dixon, R. A., Enhanced characteristics of
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genetically modified switchgrass (Panicum virgatum L.) for high biofuel production.
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427
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428
the Plant Cell Wall Biosynthesis, Structure and Function, Hayashi, T., Ed. Universal
429
Publishers (BrownWalker Press): Boca Raton, FL, 2006; pp 285-293.
430
(19) Tobimatsu, Y.; Elumalai, S.; Grabber, J. H.; Davidson, C. L.; Pan, X.; Ralph, J.,
431
Hydroxycinnamate conjugates as potential monolignol replacements: in vitro lignification
432
and cell wall studies with rosmarinic acid. ChemSusChem 2012, 5, 676-686.
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434
Impact of epicatechin, quercetin glycoside, and gallate derivatives on the lignification and
435
fermentation of maize cell walls. J. Agric. Food Chem. 2012, 60, 5152-5160.
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(21) Elumalai, S.; Tobimatsu, Y.; Grabber, J. H.; Pan, X.; Ralph, J., Epigallocatechin
437
gallate incorporation into lignin enhances the alkaline delignification and enzymatic
438
saccharification of cell walls. Biotechnology for Biofuels 2012, 5, 1-13.
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(22) Grabber, J. H.; Schatz, P. F.; Kim, H.; Lu, F.; Ralph, J., Identifying new lignin
440
bioengineering targets: 1. Monolignol substitute impacts on lignin formation and cell wall
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fermentability. BMC Plant Biol. 2010, 10, 1-13.
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(23) Grabber, J. H.; Hatfield, R. D.; Lu, F.; Ralph, J., Coniferyl ferulate incorporation
443
into lignin enhances the alkaline delignification and enzymatic degradation of maize cell
444
walls. Biomacromolecules 2008, 9, 2510-2516.
445 446
(24) Chabannes, M.; Ruel, K.; Yoshinaga, A.; Chabbert, B.; Jauneau, A.; Josseleau, J.P.; Boudet, A.-M., In situ analysis of specifically engineered tobacco lignins reveals a
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differential impact of individual transformations on the spatial patterns of lignin
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deposition at the cellular and sub-cellular levels. Plant J. 2001, 28, 271-282.
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(25) Pincon, G., Chabannes, M., Lapierre, C., Pollet, B., Ruel, K., Joseleau, J. P.,
450
Boudet, A. M., Legrand, M., Simultaneous down-regulation of caffeic/5-hydroxy ferulic
451
acid-O-methyltransferase I and cinnamoyl-coenzyme A reductase in the progeny from a
452
cross between tobacco lines homozygous for each transgene. Consequences for plant
453
development and lignin synthesis. Plant Physiol. 2001, 126, 145-155.
454
(26) Rohde, A.; Morreel, K.; Ralph, J.; Goeminne, G.; Hostyn, V.; De Rycke, R.;
455
Kushnir, S.; Van Doorsselaere, J.; Joseleau, J. P.; Vuylsteke, M.; Van Driessche, G.; Van
456
Beeumen, J.; Messens, E.; Boerjan, W., Molecular phenotyping of the pal1 and pal2
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mutants of Arabidopsis thaliana reveals far-reaching consequences on phenylpropanoid,
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amino acid, and carbohydrate metabolism. Plant Cell 2004, 16, 2749-2771.
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Interrelation between lignin deposition and polysaccharide matrices during the assembly
467
of plant cell walls. Plant Biol. 2002, 4, 2-8.
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(30) Donaldson, L. A., Lignification and lignin topochemistry – an ultrastructural view. Phytochemistry 2001, 57, 859-873.
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(31) Joseleau, J. P.; Imai, T.; Kuroda, K.; Ruel, K., Detection in situ and
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Reassessment of qualitative changes in lignification of transgenic tobacco plants and their
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Pettenati, J.; De Rycke, R.; Andersson-Gunneras, S.; Erban, A.; Fehrle, I.; Petit-Conil, M.;
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Kopka, J.; Polle, A.; Messens, E.; Sundberg, B.; Mansfield, S. D.; Ralph, J.; Pilate, G.;
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Boerjan, W., Downregulation of cinnamoyl-coenzyme A reductase in poplar: Multiple-
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level phenotyping reveals effects on cell wall polymer metabolism and structure. Plant
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Cell 2007, 19, 3669-3691.
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547
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548
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549
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Scheme and Figures
551 552
Figure 1. Lignin model compounds used for the conjugation with carrier proteins:
553
guaiacyl β-Aryl ether (1a, 1b, β–O–4-G); syringyl β-Aryl ether (2a, 2b, β–O–4-S);
554
phenylcoumaran dehydrodiconiferyl alcohol (3a, 3b, β–5); and resinol syringaresinol (4a,
555
4b, β–β).
556 557
Figure 2. Reaction of model compound with (protected) lysine. i) Ethyl bromoacetate,
558
K2CO3, acetone; ii) NaOH/95% ethanol, 89%; iii) EDC/THF/ 0.1 M MES, pH 4.7, 82%.
559 560
Figure 3. MALDI-TOF MS spectra. (A) BSA and cBSA comparisons. Top: BSA; middle:
561
cBSA from the modified protocol described; bottom: cBSA from Fisher Scientific. (B)
562
cBSA loading. cBSA was prepared by adding, top: 4 mg EDC; middle: 8 mg EDC;
563
bottom: 12 mg EDC. (C) Proteins and model 1b conjugates. Top: cBSA; middle: cBSA
564
with model compound conjugated; bottom: BSA with model compound conjugated. (D)
565
Proteins with models 2b – 4b conjugated. cBSA conjugated with; top: syringyl β-aryl
566
ether 2b (β–O–4 S–S); middle: dehydrodiconiferyl alcohol 3b (β–5); bottom:
567
syringaresinol 4b (β–β).
568
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Figure 1.
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Figure 2.
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100
100
66,658
A)
60 40 20
103,169 0 100
70,921
60 40 20
60 40 20
47,485
0 100
0 100
69,841
70,921
80 % Intensity
80 % Intensity
70,104
80 % Intensity
% Intensity
80
56,638
60 40
65,316 46,134
0 40,000
50,000
74,245
60,000
70,000
80,000 90,000 Mass (m/z)
100,000
100
47,485
50,000
60,000
70,000
D)
80,000 90,000 Mass (m/z)
100,000
110,000
90,045
% Intensity
80
60 40 20
40
0 40,000
110,000
70,921
C)
60
20
83,469
80 % Intensity
40 20
0 100
100
60
99,669
88,748
20
68,842
B)
80 % Intensity
% Intensity
80
60 40 20
47,485
0 100
0 100
88885
116,031 80
80 % Intensity
% Intensity
58,382 60 40 20
0 100
71,421
89,437 80 % Intensity
80 % Intensity
40 20
0 100
60 40 20
60 40 20
95,641 0 40,000
60
50,000
60,000
70,000
80,000 90,000 Mass (m/z)
107,344
100,000
110,000
0 50K
60K
70K
80K
Figure 3.
31 ACS Paragon Plus Environment
90K
100K 110K 120K 130K 140K 150K Mass (m/z)
Journal of Agricultural and Food Chemistry
TABLE OF CONTENTS GRAPHIC [Sized as stated in our decision letter: “The TOC graphic may be up to 4.7 in. (12.0 cm) wide and 1.8 in. (4.6 cm) tall. (See detailed instructions at the Paragon Plus Web site.)”]
TABLE OF CONTENTS GRAPHIC – alternate sizing [Sized as stated in your JAFC Instructions: “The TOC graphic may be up to 3.25 in. (8.5 cm) wide and 1.75 in. (4.75 cm) tall. (See detailed instructions at the Paragon Plus Web site.)”]
32 ACS Paragon Plus Environment
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