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Is Indolinonic Hydroxylamine a Promising Artificial Antioxidant? Quan V. Vo, Mai Van Bay, Pham Cam Nam, and Adam Mechler J. Phys. Chem. B, Just Accepted Manuscript • DOI: 10.1021/acs.jpcb.9b05160 • Publication Date (Web): 28 Aug 2019 Downloaded from pubs.acs.org on August 30, 2019

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The Journal of Physical Chemistry

Is Indolinonic Hydroxylamine a Promising Artificial Antioxidant? Quan V. Vo1,2*, Mai Van Bay3, Pham Cam Nam4 and Adam Mechler5 1Department

for Management of Science and Technology Development, Ton Duc Thang

University, Ho Chi Minh City 700000, Vietnam 2Faculty

of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City 700000, Vietnam

3Department

of Chemistry, The University of Da Nang - University of Science and

Education, Da Nang 550000, Vietnam. 4Department

of Chemical Engineering, The University of Da Nang - University of Science

and Technology, Da Nang 550000, Vietnam 5Department

of Chemistry and Physics, La Trobe University, Victoria 3086, Australia

*Corresponding author: [email protected] Abstract: Indolinonic hydroxylamine (IH) is a new-generation artificial antioxidant that, due to its ability to fraction into apolar environments, is considered for prevention against lipid peroxidation. For this reason, it is important to understand, and compare, its activity in polar and non-polar environments. In this study, the antioxidant activity of IH has been evaluated against HO and HOO radicals in water and, for a lipid-mimetic environment, pentyl ethanoate solvent, using kinetic calculations. It was found that the overall reaction rate constant of the HO radical scavenging is more than seven times higher in aqueous (8.98×109 M1 s1) than in apolar media (1.22×109 M1 s1). However, HOO scavenging was 35 times faster in apolar media (1.00×105 M1 s1 vs 2.80×103 M1 s1). In lipid environment the HAT mechanism was favored for the antioxidant activity for both radical species, whereas in aqueous solution the SET mechanism defined the HO, whereas HAT the HOO

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scavenging. IH was shown to be one of the most active antioxidants in lipid environment, an essential characteristic for the protection of biological systems. 1. Introduction Indolinonic hydroxylamine (IH, Figure 1) and related aminoxyls are described as new-generation antioxidants1, garnering substantial attention due to their excellent free radical scavenging activity in lipidic environments2-9. Computational studies suggest that the O-H bond dissociation energies (BDE-OH) of the hydroxylamine moieties of IH and its derivatives are much lower than that of vitamin E, indicating that the IH analogues may have stronger antioxidant activity than the natural vitamin E10. Studies also showed that radicals formed by the N-O-H bonds i.e. phthalimide N-oxyl radicals are efficient oxidation catalysts of hydrocarbons or other substrates11,12. IH analogs and derivatives have been proposed for incorporation into medicinal compounds6,13,14. Thus far all computational studies evaluated the antioxidant activity of IHs by the hydrogen atom transfer (HAT) mechanism, characterizing activity based on the calculated BDE(OH)s1,10. The antioxidant activity however may follow instead the single electron transfer followed by-proton transfer (SET-PT) or sequential proton loss electron transfer (SPLET) mechanisms15-19. The dominance of HAT has not been demonstrated, therefore the antioxidant activity of IH should be investigated comparing these three main mechanisms rather than limiting calculations to HAT alone. Furthermore, it should be noted that in aqueous solutions IH is involved in acid-base equilibria. The anionic species have been implicated before in radical scavenging activity, and they may have higher activities than the neutral species20. Therefore, calculations that only consider the thermodynamic properties of neutral IH may underestimate its activity. Thus, a study of antioxidant 2 ACS Paragon Plus Environment

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properties of IH should consider the three main potential mechanistic pathways by both thermochemical and kinetic calculations to better understand the antioxidant properties of IH20-22. Given that IH is implicated in protecting lipids from oxidative damage, calculations should be performed in lipidic environments as well. Therefore, this study aims to (1) investigate the antioxidant activity of IH considering the three main antioxidant mechanisms in aqueous as well as lipid media, using thermodynamic calculations; (2) evaluate the scavenging of typical radicals HO and HOO by kinetic study; and (3) reveal the favored antioxidant mechanism of IH specific to each reactive oxygen species and chemical environments.

Figure 1. The structure of indolinonic hydroxylamine. 2. Computational methods M05-2X/6-311++G(d,p) method with the solvation model density (SMD) were used for kinetic calculations in both water and pentyl ethanoate solvents for their demonstrated high accuracy in predicting kinetic properties18,20,23,24. The rate constant (k) was calculated by using the conventional transition state theory (TST) and 1M standard state as:25-30 𝑘 = 𝜎𝜅

𝑘𝐵𝑇 ℎ

𝑒 ―(Δ𝐺



)/𝑅𝑇

Where kB and h are the Boltzmann and Planck constants, respectively, ∆G≠ is Gibbs free energy of activation of the studied reaction,  is the reaction symmetry number that 3 ACS Paragon Plus Environment

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represents reaction path degeneracy (which was calculated following the literature31,32), the number of possible different but equivalent reaction pathways, and  accounts for tunneling corrections which were calculated using Eckart barrier33. The Marcus Theory was used to estimate the reaction barriers of SET reactions34-37. To avoid over-penalizing entropy losses in solution, in this study the solvent cage effects were included following the corrections proposed by Okuno38, adjusted with the free volume theory according to the Benson correction20,39. These corrections have been successfully used to study the radical scavenging activity of antioxidants in solution20,40-42 and are in good agreement with activity data independently obtained by Ardura et al43. For rate constants that were close to the diffusion limit a correction was applied to yield realistic results20. The apparent rate constants (kapp) were calculated following the Collins–Kimball theory in the solvents at 298.15K44; the steady-state Smoluchowski rate constant (kD) for an irreversible bimolecular diffusioncontrolled reaction was calculated following the literature20,45. For the species that have multiple conformers, all of these were investigated and the conformer with the lowest electronic energy was included in the analysis. The hindered internal rotation treatment was also applied to the single bonds to ensure that the obtained conformer has the lowest electronic energy46,47. All transition states were characterized by the existence of only one single imaginary frequency. Intrinsic coordinate calculations (IRCs) were performed to ensure that each transition state is corrected. All calculations were performed with the Gaussian 09 suite of programs48. In this study, the Eyringpy program was used as it is highly recommended for calculating rate constants in both gas phase and solvent environments18,23,49,50. Atom-in-molecule (AIM) analysis51 was performed by using the AIM2000 software52. 4 ACS Paragon Plus Environment

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3. Results and discussions 3.1. Thermodynamic study 3.1.1. Acid–base equilibria As expected, the lowest PA value was calculated at O10H bond (Table S1, SI). Thus this group was used to investigate the acid–base equilibria of IH. It was shown that the model E1 (1) has the mean unsigned errors lower than 1 pKa for most of the test functionals53. Thus the pKa of IH was calculated by using the model E1 and measured by the equation 2., in which the [H2O] value is 55.55 mol.L-153-55. IHOH + OH(3H2O)  IHO(H2O) + 3H2O

(1)

pKa = Gs/RTln(10) + 14 + 3log[10]

(2)

The calculated pKa value in this work was 22.3. Given that there is no data on the pKa of IH in the literature, the validity of this value is assessed as follows. It is generally observed that the pKa values in water are lower than in other polar but aprotic solvents such as DMSO solvent by about 1-2 pK units56. In our calculation, the pKa of IH in water is lower than the pKa of the structurally similar acid PhN(Bz)OH in DMSO (pKa(DMSO)=23.8) by  1.5 pK unit57. Therefore, the calculated pKa of 22.3 of IH is in the expected range. Consistently at physiological pH (7.40) neutral IH is the dominant species, and thus it is used for further studies. 3.1.2. Mechanism valuating The reactivity of IH toward R (R= HO and HOO ) radicals in aqueous and lipid (pentyl ethanoate) environments were assessed by three typical antioxidant mechanisms: hydrogen atom transfer (HAT), sequential electron transfer (SET), and radical adduct formation (RAF). The processes can be described with the following reactions: 5 ACS Paragon Plus Environment

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where

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IH + R  IH + R

(SET)

(3)

IH + R  IH + RH

(HAT)

(4)

IH + R  IHR

(RAF)

(5)

R = HO, HOO To initial evaluate the antioxidant activity of IH, the BDEs of possible XH (X = C, N,

O) bonds were calculated by using M05-2X/6-311++G(d,p) model of chemistry in both water and pentyl ethanoate solvents and presented in Table S1, SI. It was found that the lowest BDE value was calculated for the O10H bond at 70.7 and 68.2 kcal/mol in water and pentyl ethanoate, respectively. The results are in good agreement with previous reports of calculated values using G3B3 method1 and the accurate calculating method CBSQB3 (70.5 kcal/mol). The BDEs for C2-H and N-H are slightly higher at 80.9 and 92.5 kcal/mol in aqueous, as well as 79.3 and 92.2 kcal/mol in lipidic media, respectively. BDEs for the other CH bonds are significantly higher in the range of 114.5 to 117.9 kcal/mol. This suggests that the C(5-8)H bonds do not play any role in the radical scavenging action of IH and thus they are omitted in the following calculations. The calculated IE values of IH are 102.7 and 129.6 kcal/mol in polar and non-polar solvents, respectively (Table S1, SI), suggesting that radical scavenging following the SET mechanism is more favored in aqueous environment than in lipidic environment. The Gibbs free energies (Go) of the reactions of IH with HO and HOO radicals following the SET, HAT and RAF, respectively, were calculated and shown in Table 1. It was found that the reactions of IH with the HO radical are always spontaneous (Go 1 and the small EHD ( 4.8 kcal/mol). It is important to note that the formation of new H17∙∙∙O21 bond is more stable in pentyl ethanoate (EHD = 32.7 kcal/mol) than in water (EHD = 28.8 kcal/mol), while the bond dissociation energy of H17∙∙∙O10 bond is lower in water (EHD = 184.0 kcal/mol) than in pentyl ethanoate (EHD176.2 kcal/mol) (Table 4). This may explain the higher stability of the IHO10-H-OOH TS in the lipid environment (E = 1.9 kcal/mol) than in water (E = 4.3 kcal/mol) (Table 3) and the highest rate constant of HIO10H + HOO in pentyl ethanoate solvent. 4. Conclusions The antioxidant activity of IH has been evaluated by the scavenging of hydroxyl and hydroperoxyl radicals in water and pentyl ethanoate solvents. It was found that even though the overall reaction rate constant of the HO radical scavenging is more than seven times higher in aqueous (8.98×109 M1 s1) than in lipidic media (1.22×109 M1 s1), the figure is about 35 times higher in lipidic media for the hydroperoxyl radical scavenging. It was shown that the SET mechanism contributes more than 66% in the overall rate constant of the HO radical scavenging in water, but it has no impacts on the rate constant in pentyl ethanoate solvent and in the HOO scavenging, which is governed by the HAT mechanism. The HOO radical scavenging of IH is about 29 and 17 times faster than those of Trolox and ascorbic acid in pentyl ethanoate solvent, respectively. Thus IH holds the potential for use in preventing oxidative degradation in lipid environments.

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Conflicts of interest There are no conflicts to declare Acknowledgements The research is funded by Vietnam National Foundation for Science and Technology Development (NAFOSTED) under grant number 104.06-2018.308. Supporting Information The Supporting Information is available free of charge on the ACS Publications website at DOI: The Cartesian coordinates, the frequency and energies of all of the transition states in water and pentyl ethanoate. References (1)

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Bader, R. F. A Quantum Theory of Molecular Structure and its Applications. Chem. Rev. 1991, 91, 893-928.

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Biegler-König, F., AIM 2000, University of Applied Sciences, Bielefeld, Germany, 2000.

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Rebollar-Zepeda, A. M.;

Campos-Hernández, T.;

Ramírez-Silva, M. T.;

Rojas-

Hernández, A.; Galano, A. Searching for Computational Strategies to Accurately Predict pK as of Large Phenolic Derivatives. J. Chem. Theory Comput. 2011, 7, 25282538. (54)

Pliego Jr, J. R. Thermodynamic Cycles and the Calculation of pKa. Chem. Phys. Lett. 2003, 367, 145-149.

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Bryantsev, V. S.; Diallo, M. S.; Goddard Iii, W. A. Calculation of Solvation Free Energies of Charged Solutes Using Mixed Cluster/Continuum Models. J. Phys. Chem. B 2008, 112, 9709-9719.

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Matthews, W. S.; Bares, J. E.; Bartmess, J. E.; Bordwell, F.; Cornforth, F. J.; Drucker, G. E.; Margolin, Z.; McCallum, R. J.; McCollum, G. J.; Vanier, N. R. Equilibrium Acidities of Carbon Acids. Vi. Establishment of an Absolute Scale of Acidities in Dimethyl Sulfoxide Solution. J. Am. Chem. Soc. 1975, 97, 7006-7014.

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Bordwell, F. G.; Liu, W.-Z. Equilibrium Acidities and Homolytic Bond Dissociation Energies of N−H and/or O−H Bonds in N-Phenylhydroxylamine and its Derivatives. J. Am. Chem. Soc. 1996, 118, 8777-8781.

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León-Carmona, J. R.; Galano, A. Is Caffeine A Good Scavenger of Oxygenated Free Radicals? J. Phys. Chem. B 2011, 115, 4538-4546.

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Galano, A. On the Direct Scavenging Activity of Melatonin Towards Hydroxyl and a Series of Peroxyl Radicals. Phys. Chem. Chem. Phys. 2011, 13, 7178-7188.

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Pérez-González, A.; Galano, A. Oh Radical Scavenging Activity of Edaravone: Mechanism and Kinetics. J. Phys. Chem. B 2010, 115, 1306-1314.

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Galano, A.; Alvarez-Idaboy, J. R.; Francisco-Márquez, M. Physicochemical Insights on the Free Radical Scavenging Activity of Sesamol: Importance of the Acid/Base Equilibrium. J. Phys. Chem. B 2011, 115, 13101-13109.

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León-Carmona, J. R.; Alvarez-Idaboy, J. R.; Galano, A. On the Peroxyl Scavenging Activity of Hydroxycinnamic Acid Derivatives: Mechanisms, Kinetics, And Importance of the Acid–Base Equilibrium. Phys. Chem. Chem. Phys. 2012, 14, 1253412543.

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Galano, A.; Francisco-Márquez, M.; Alvarez-Idaboy, J. R. Mechanism and Kinetics Studies on the Antioxidant Activity of Sinapinic Acid. Phys. Chem. Chem. Phys. 2011, 13, 11199-11205.

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Galano, A.; Alvarez-Idaboy, J. R.; Francisco-Márquez, M.; Medina, M. E. A Quantum Chemical Study on the Free Radical Scavenging Activity of Tyrosol and Hydroxytyrosol. Theor. Chem. Acc. 2012, 131, 1173.

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Galano, A.;

Francisco-Márquez, M.; Alvarez-Idaboy, J. R. Canolol: A Promising

Chemical Agent Against Oxidative Stress. Phys. Chem. Chem. Phys. 2011, 115, 85908596. (66)

Rozas, I.; Alkorta, I.; Elguero, J. Behavior of Ylides Containing N, O, And C Atoms as Hydrogen Bond Acceptors. J. Am. Chem. Soc. 2000, 122, 11154-11161.

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TOC Graphic

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