Subscriber access provided by UNIV OF NEWCASTLE
Biotechnology and Biological Transformations
Enterobacter asburiae reduces cadmium toxicity in maize plants by repressing iron uptake-associated pathways Cheng Zhou, Ninggao Ge, Jiansheng Guo, Lin Zhu, Zhongyou Ma, Shiyong Chen, and Jianfei Wang J. Agric. Food Chem., Just Accepted Manuscript • DOI: 10.1021/acs.jafc.9b03293 • Publication Date (Web): 21 Aug 2019 Downloaded from pubs.acs.org on August 22, 2019
Just Accepted “Just Accepted” manuscripts have been peer-reviewed and accepted for publication. They are posted online prior to technical editing, formatting for publication and author proofing. The American Chemical Society provides “Just Accepted” as a service to the research community to expedite the dissemination of scientific material as soon as possible after acceptance. “Just Accepted” manuscripts appear in full in PDF format accompanied by an HTML abstract. “Just Accepted” manuscripts have been fully peer reviewed, but should not be considered the official version of record. They are citable by the Digital Object Identifier (DOI®). “Just Accepted” is an optional service offered to authors. Therefore, the “Just Accepted” Web site may not include all articles that will be published in the journal. After a manuscript is technically edited and formatted, it will be removed from the “Just Accepted” Web site and published as an ASAP article. Note that technical editing may introduce minor changes to the manuscript text and/or graphics which could affect content, and all legal disclaimers and ethical guidelines that apply to the journal pertain. ACS cannot be held responsible for errors or consequences arising from the use of information contained in these “Just Accepted” manuscripts.
is published by the American Chemical Society. 1155 Sixteenth Street N.W., Washington, DC 20036 Published by American Chemical Society. Copyright © American Chemical Society. However, no copyright claim is made to original U.S. Government works, or works produced by employees of any Commonwealth realm Crown government in the course of their duties.
Page 1 of 43
Journal of Agricultural and Food Chemistry
1
Enterobacter asburiae reduces cadmium toxicity in maize plants by repressing iron
2
uptake-associated pathways
3 4
Cheng Zhou1,2, Ninggao Ge1, Jiansheng Guo3, Lin Zhu1, Zhongyou Ma1, Shiyong Cheng1*,
5
Jianfei Wang1*
6 7
1Key
Lab of Bio-Organic Fertilizer Creation, Ministry of Agriculture, Anhui Science
8
and Technology University, Bengbu 233100, China
9
2Jiangsu
Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative
10
Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center
11
of Resource-Saving Fertilizers, Nanjing Agricultural University, Nanjing 210095, China
12
3School
of Medicine, Zhejiang University, Hangzhou 310058, China
13 14
Cheng Zhou and Ninggao Ge contributed equally to this work.
15
*Corresponding
16
Shiyong Cheng,
[email protected];
17
Jianfei Wang,
[email protected] 18
Phone: +86-0550-6733024; Fax: +86-0550-6733024
authors:
1
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
19
Page 2 of 43
Abstract
20
Soil microbes have recently been utilized to improve cadmium (Cd) tolerance and
21
lower its accumulation in plants. Nevertheless, whether rhizobacteria can prevent Cd
22
uptake by graminaceous plants and the underlying mechanisms remain elusive. In this
23
study, inoculation with Enterobacter asburiae NC16 reduced transpiration rates and
24
the expression of some iron (Fe) uptake-related genes including ZmFer, ZmYS1, ZmZIP
25
and ZmNAS2 in maize (Zea mays) plants, which contributed to mitigation of Cd toxicity.
26
However, the inoculation with NC16 failed to suppress the transpiration rates and
27
transcription of these Fe uptake-related genes in plants treated with fluridon, an
28
abscisic acid (ABA) biosynthetic inhibitor, indicating that the impacts of NC16-
29
inoculation observed were dependent on the actions of ABA. We found that NC16
30
increased host ABA levels by mediating the metabolism of ABA rather than its
31
synthesis. Moreover, the capacity of NC16 to inhibit plant uptake of Cd was greatly
32
weakened in plants overexpressing ZmZIP, encoding a zinc/iron transporter.
33
Collectively, our findings indicated that E. asburiae NC16 reduced Cd toxicity in maize
34
plants at least partially by hampering the Fe uptake-associated pathways.
35
Key words
36
Abscisic acid metabolism, Cadmium stress, Iron uptake transporter, Rhizobacteria
2
ACS Paragon Plus Environment
Page 3 of 43
Journal of Agricultural and Food Chemistry
37
Introduction
38
Cadmium (Cd) is the most mobile heavy metal found in soils that exhibits high
39
toxicity to almost all living organisms.1 Due to huge demands for foods, Cd is
40
transferred considerably from Cd-contaminated soils into edible tissues of crops and
41
thus enters into food chains, posing risks to animal or human health.2,3 Although the
42
immobilization of heavy metals by physical adsorption and chemical treatments have
43
so far been employed to lower Cd availability in soils, these methods are costly and
44
instable, rendering it impractical for wide application in farmlands.4 Hence, it is urgent
45
to develop efficient tactics to reduce Cd levels in crops grown in Cd-polluted
46
agricultural soils.
47
In plants, Cd stress often causes diverse cytotoxic effects such as inhibition of
48
photosynthesis, mineral and water absorption, involving the competition of metal-
49
binding molecules with other essential metals, especially iron (Fe).5 Cd can enter into
50
plant cells via several transporters such as NRAMPs, IRT1 and Ca channels.6 However,
51
nicotianamine (NA), a critical chelator involved in the Fe translocation, can reduce Cd
52
transport from roots to shoots.7 It has well been documented that Cd stress often
53
provokes Fe deficiency responses by activating the expression of Fe acquisition-
54
related genes such IRT1 and FRO2.8 In Strategy I plants (dicots and non-
55
graminaceous monocots), Cd stress can trigger the transcription of IRT1, thereby
56
enhancing the IRT1-mediated Cd uptake.9,10 In Strategy II (graminaceous) plants, Cd-
57
induced the release of phytosiderophores (PS) promotes the formation of Fe3+-PS
58
complex, which can be taken up by the YS1/YSL proteins.11
3
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 4 of 43
59
Root-secreted PS to chelate Cd has previously been considered as an important
60
strategy for ameliorating Cd toxicity in maize plants, although the formed Cd2+-PS
61
complex is relatively weak as compared to Fe3+ or Zn2+.12 In fact, the PS-alleviated Cd
62
toxicity in plants is mainly attributable to improve Fe nutritional status rather than to
63
lower Cd availability.12 Consistently, Strategy I plants such as Arabidopsis
64
overexpressing ZmYS1 exhibit stronger Cd tolerance, which contributes to improved
65
Fe acquisition via bypassing Cd inhibition of IRT1-mediated Fe uptake.12 Interestingly,
66
more recently, a strategy I-like Fe uptake system has been found in Strategy II plants
67
such as rice and maize.13,14 Fe-regulated transporters such as OsIRT1, OsIRT2, ZmIRT1
68
and ZmZIP3 are identified as functional Fe and Zn transporters, indicating that Strategy
69
II plants can utilize both the strategy I and II mechanisms to mine Fe.13,14 Considering
70
that, the interdiction of strategy I-like Fe acquisition pathways in Strategy II plants may
71
repress the entry of Cd into agricultural foods.
72
Beneficial bacteria colonized in plant rhizosphere have so far received great
73
attentions.15-17 Diverse rhizobacteria establish mutual relationships with various plant
74
species to benefit two parties.18,19 These beneficial bacteria are collectively considered
75
as plant growth-promoting rhizobacteria (PGPR) that can assist plants in antagonizing
76
phytopathogens, promoting root growth and surviving under adverse stresses.15-20
77
Plant-microbes interactions have been shown to improve the efficiency of
78
phytoremediation and lower Cd accumulation in plants by various mechanisms, such
79
as microbial adsorption and auxin-mediated signaling pathways.17,21 Some abscisic
80
acid (ABA)-generating bacteria have recently been demonstrated to inhibit IRT1-
4
ACS Paragon Plus Environment
Page 5 of 43
Journal of Agricultural and Food Chemistry
81
mediated Cd uptake and thus reduce Cd toxicity in plants.3,22 Nevertheless, ABA can
82
be readily degraded in soils because of its chemical instability and the occurrence of
83
ABA-metabolizing bacteria, which may result in the instability of bacteria-derived ABA
84
in the soils.23-25
85
In the present study, inoculation of maize plants with Cd-tolerant bacterium
86
Enterobacter asburiae NC16 reduced Cd toxicity. Transcriptome analyses revealed
87
that the expression of some Fe uptake-related genes including ZmFer, ZmYS1, ZmZIP
88
and ZmNAS2 was greatly suppressed in the Cd-exposed roots by NC16. Moreover,
89
NC16-mediated inhibition of host ABA metabolism resulted in increases of ABA levels,
90
which was responsible for reducing the absorption of Cd by host plants. Our results
91
further suggested that the inoculation of plants with NC16 relieved Cd toxicity
92
primarily by interrupting the Fe uptake-related pathways.
93
Materials and methods
94
Plant materials, bacterial isolation and growth conditions
95
Maize (Zea mays L. inbred line A32) seeds were treated with 0.1% HgCl2 for 10
96
min and rinsed with sterile water at least three times. The sterilized seeds were
97
germinated under dark and high humidity conditions at 30°C for 3 days (d). Soil
98
samples were air-dried, ground and sieved through a 3-mm sieve for pot experiments.
99
An aqueous solution of CdCl2 was used to treat the soils and keep it at 100% of water-
100
holding capacity while ensuring an enrichment of 50 mg kg-1 Cd. The physicochemical
101
properties of the soils were shown in Supplementary Table S1. 10-d-old seedlings were
102
then transplanted into the Cd-polluted soils and placed in a growth chamber at 28°C
5
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 6 of 43
103
light (16 h)/25°C dark (8 h) and 70% relative humidity. After three months,
104
rhizospheric soils were used to isolate Cd-tolerant bacteria based on the methods
105
described by Lin et al.26 One Cd-tolerant bacterial strain was purified and identified as
106
E. asburiae NC16 by 16s rRNA sequencing (Genbank No. MK968154). This strain was
107
stored in LB medium (10 g L-1 tryptone, 5 g L-1 yeast extract and 10 g L-1 NaCl)
108
containing 20% glycerol at −80°C for further experiments.
109
Assays of pot and split-root systems
110
For pot experiments, maize seedlings were grown in Cd-polluted soils with the
111
content of 50 mg kg-1 Cd. Pot experiments were conducted three times and each
112
replicate contained 15 pots. The isolated bacteria were cultured in liquid LB medium
113
at 30°C in a shaker at 200 rpm for 18 h. The culture was centrifuged at 8000 × g for 10
114
min, and the precipitate was then washed three times with sterile normal saline.
115
Bacterial suspensions were prepared in sterile water to obtain an inoculum density of
116
2 × 108 CFU mL-1. The bacterial suspensions were poured into the soil at the final
117
density of 5 × 107 CFU g-1. To further assess the colonization of E. asburiae NC16 in
118
plant rhizosphere, the plasmid pPROBE was firstly transferred into this strain. Serial
119
dilutions from rhizopsheric soils were spread on LB agar medium supplemented with
120
50 μg mL-1 of kanamycin, and incubated at 30°C to enumerate bacterial colonies.
121
In a split-root system, a two-compartment plastic chamber was designed, and
122
maize roots were put into two side chambers of the root box. To perform the split-
123
root assays, 10-d-old maize seedlings grown in 1/2 Hoagland medium were
124
transferred into split-root systems for 5 weeks. Bacterial strains were collected and
6
ACS Paragon Plus Environment
Page 7 of 43
Journal of Agricultural and Food Chemistry
125
washed three time with sterile normal saline, and then resuspended in 1/2 Hoagland
126
medium. Bacterial suspensions were adjusted to an optical density of 5 × 107 CFU mL-1.
127
The left chamber of split-root systems was inoculated with the bacterial suspensions
128
containing 0 or 0.3 mM CdCl2, and the other chamber was not inoculated. The growth
129
medium was replaced every 3 d during the whole plant growth.
130
Transcriptome analyses and quantitative real time PCR
131
In a split-root system, 10-d-old maize seedlings were treated with or without
132
bacterial suspensions, and were subjected to 0 or 0.3 mM CdCl2. After 48 h of
133
treatments, root samples were separated for extracting total RNA using Trizol reagent
134
(Invitrogen, USA). The quality and quantity of RNA was examined by the Agilent 2100
135
Bioanalyzer (Agilent, USA). The RNA samples were used to construct cDNA libraries
136
using the Illumina Hiseq 2500 platform (Illumina, USA). Raw reads were filtered by
137
removing the low-quality reads and adaptor sequences, and were deposited in the
138
NCBI SRA database (accession No. SRR9306628, SRR9306629, SRR9306630 and
139
SRR9306631). Log2(Fold-change) > 1.0 and FDR adjusted p-value < 0.05 was set as the
140
cutoff to screen differentially expressed genes (DEGs) among different treatments.
141
Gene Ontology (GO) enrichment analysis was conducted as reported by Wang et al.27
142
To perform quantitative real time PCR (qRT-PCR), RNA samples were reversely
143
transcribed into cDNA using M-MLV reverse transcriptase (TaKaRa, Japan) according
144
to the manufacturer’s instructions. The synthesized cDNA samples were used as the
145
templates of qRT-PCR reactions that were carried out in an Applied Biosystems (ABI)
146
7500 PCR machine as described by Zhou et al.20 The maize Actin (ZmActin) was used
7
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 8 of 43
147
to normalize the expression levels of targeted genes. The primers used in this study
148
were listed in Supplementary Table S2.
149
Generation of transgenic maize plants
150
To generate 35Spro::ZmZIP (ZIP-ox) plants, the coding sequence of ZmZIP was
151
amplified by PCR. The PCR conditions were as follows: 95°C (5 min), 35 cycles of 95°C
152
(30 s), 58°C (30 s), 72°C (90 s), and 72°C (5 min). More, PCR-amplified products were
153
inserted into the cloning vector pUC18 for sequencing. The PCR products of ZmZIP
154
were then digested and ligated into the binary vector pBI121 using Xbal and Kpnl.
155
Transgenic plants were obtained by the Agrobacterium-mediated transformation of
156
maize shoot tips.28 Briefly, Agrobacterium tumefaciens carrying the recombinant
157
plasmids pBI121-ZmZIP at OD600 = 0.8 was collected and resuspended in 1/2 MS
158
liquid medium containing 100 µM acetosyringone. Injured shoot tips were incubated
159
in the bacterial suspension for 15 min, and then cultured on MS agar medium for 72 h
160
in the dark at 25 °C. Subsequently, transformed plantlets were transferred into pots,
161
and the seedlings were screened by spraying with 350 μg mL-1 of kanamycin after 2
162
weeks of growth. Additionally, PCR assays were also conducted on these transgenic
163
lines. T3 generation lines displaying the highest transcription of ZmZIP were used in
164
next experiments. The primers used in this experiment were listed in Supplementary
165
Table S2.
166
Measurement of metal ion in plants, and Cd availability in soils
167
To measure metal ion content, shoot and root samples were firstly rinsed with 0.5
168
mM CaCl2 and dried overnight at 65°C. 0.1 g of dried samples was digested by
8
ACS Paragon Plus Environment
Page 9 of 43
Journal of Agricultural and Food Chemistry
169
HNO3/HClO4 (4:1, v/v) according to the method described by Lei et al.29 Elemental
170
analysis was performed by an inductively coupled plasma atomic emission
171
spectroscopy (ICP-AES; Perkin Elmer, USA). In addition, the bioavailability of Cd in soils
172
was assessed by monitoring the extractable Cd content released by soils as described
173
by Houba et al.30
174
Analyses of physiological parameters, chloroplast structure and phytosiderophore
175
H2O2 content was determined as previously described by Brennan and Frenkel.31
176
Malondialdehyde (MDA) levels were measured by using thiobarbituric acid-based
177
colorimetric method described by Quan et al.32 Electrolyte leakage (EL) was assayed
178
based on the formulae: EL (%) = Initial electrical conductance (C1)/Final electric
179
conductance (C2) × 100% as described by Shou et al.33 Chlorophyll content was
180
extracted and determined according to the method described by Porra.34 Chloroplast
181
ultrastructure was examined by transmission electron microscopy (TEM) based on the
182
method described by Zhou et al.20 In addition, to analyze the root-released
183
phytosiderophore 2’-deoxymugineic acid (DMA), the 1/2 Hoagland medium in the
184
non-inoculated chamber was replaced with ultrapure water for harvesting root
185
exudates. Root dry weight was used to normalize the content of root exudates. The
186
concentrations of DMA were quantified by HPLC.12 The maximal PSII photochemical
187
efficiency (Fv/Fm) was measured on maize leaves after 0.5 h of dark adaptation by a
188
chlorophyll fluorescence imaging systems FluorCam 7 (Photon Systems Instruments,
189
Brno, Czech Republic).
190
Detection of ABA content and ABA 8′-hydroxylase activity
9
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 10 of 43
191
The content of ABA was quantified by an indirect enzyme-linked immunosorbent
192
assay (ELISA) according to the method described by Yang et al.35 To assess the capacity
193
of plants to metabolize the hormone ABA, 10-d-old maize seedling grown in the split
194
root system were treated with or without cell suspensions of NC16 for 48 h. Then, the
195
roots were incubated with the specific radioactivity of 3.0 × 104 Bq/mL 3H-ABA for 24
196
h. The metabolism of ABA and phaseic acid (PA) was analyzed as previously described
197
by Wang et al.36
198
Statistical Analysis
199
The data presented in this study indicated the means of at least three replicated
200
experiments. Statistical analysis for the data of physiological parameters such as
201
biomass and metal ion content, qRT-PCR, stomatal aperture, transpiration rate and
202
ABA levels was conducted using one-way analysis of variance (ANOVA) and Duncan’s
203
multiple range tests at p < 0.05 in the statistical package of IBM SPSS Statistics 21.0.
204
Results
205
Inoculation of maize plants with E. asburiae ameliorates Cd stress-induced toxicity
206
To investigate the effects of E. asburiae NC16 on the resistance of maize plants to
207
Cd stress, we assessed plant growth performance. When plants were grown in Cd-
208
polluted soils for two weeks, Cd stress resulted in plant growth retardation with low
209
biomass. However, inoculation of plants with NC16 obviously alleviated Cd toxicity,
210
displaying higher biomass and chlorophyll levels (Fig. 1a-c). In addition, no phenotypic
211
difference was observed between the control and inoculated plants under non-Cd
212
stress (Fig. 1a). The colonization abilities of NC16 in the plant rhizosphere were further
10
ACS Paragon Plus Environment
Page 11 of 43
Journal of Agricultural and Food Chemistry
213
examined. As shown in Supplementary Fig. S1, the population of NC16 initially
214
increased (1.7 × 107 CFU g-1) and then decreased (5.3 × 106 CFU g-1) in the Cd-polluted
215
soils after two weeks of inoculation. However, the bacterial colonization was
216
observably higher in the non-Cd-treated soils than in the Cd-polluted soils.
217
In the split-root system (Fig. 2a), there was no significant difference in the plant
218
growth between the control and inoculated plants under non-Cd stress (Fig. 2b). The
219
control plants displayed more severe root growth inhibition than the inoculated plants
220
after 5 weeks of Cd treatment (Fig. 2c). Shoot and root fresh weights were significantly
221
higher in the inoculated plants than in the controls (Fig. 2d,e). The production of H2O2
222
was greatly elevated in the Cd-treated leaves. By contrast, Cd stress-induced increases
223
of H2O2 levels were remarkably decreased in the inoculated plants (Fig. 2f). EL and
224
MDA, important indicators of stress injuries, were also determined in both the control
225
and inoculated plants. As shown in Fig. 2g,h, the inoculated leaves had less the values
226
of EL and MDA than the controls after Cd treatment. These data indicated that the
227
inoculation of maize plants with NC16 could mitigate Cd stress.
228
Effects of E. asburiae on plant photosynthesis and chloroplast structures
229
Alleviation of leaf chlorosis by NC16 was in line with the measured chlorophyll
230
levels (Fig. 3a). The value of Fv/Fm was no significant difference between the control
231
and inoculated plants under non-Cd stress, although the value of Fv/Fm in the controls
232
was significantly lower than that in the inoculated plants after Cd treatment (Fig. 3b).
233
As shown in Fig. 3c, TEM observation of chloroplast structures of mesophyll and
234
bundle sheath cells in the Cd-treated leaves showed more swollen chloroplasts and
11
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 12 of 43
235
less number of thylakoids, grana stacking and lamellae. Compared with the controls,
236
when the Cd-treated plants were inoculated with NC16, more thylakoids, grana
237
stacking and lamellae were found in the chloroplasts, indicating that these harmful
238
effects could be alleviated by NC16. Nevertheless, the chloroplast structures were no
239
observable difference between the control and inoculated plants under non-Cd stress.
240
Transcriptome analysis of E. asburiae-colonized maize roots
241
To explore the mechanisms underlying the inoculation with NC16 enhanced the
242
adaptation of maize plants to Cd stress, the whole genome expression profiles of
243
maize roots were conducted by RNA-Sequencing to identify root-expressed genes in
244
response to NC16 or Cd stress. For this purpose, 10-d-old maize seedlings were
245
treated with cell suspensions of NC16 and/or 0.3 mM Cd2+ for 48 h. After different
246
treatments, we examined differential gene expression by comparison of the control
247
plants with Cd stress (+Cd), NC16 (+NC16), and Cd stress plus NC16 (+Cd+NC16) (Fig.
248
4a). The data of RNA-Sequencing showed that 962 genes, corresponding to 544 up-
249
regulated and 418 down-regulated genes, exhibited significantly differential
250
expression in the Comparison I (+Cd vs –Cd; Supplementary Table S3). However, more
251
total number of DEGs was regulated by NC16 in the Comparison II (+NC16-Cd vs –Cd;
252
Supplementary Table S4) or combination of NC16 and Cd stress in the Comparison III
253
(+NC16+Cd vs +Cd) than was regulated by Cd stress alone (Fig. 4b; Supplementary
254
Table S5).
255
As shown in Fig. 4c, 810 up-regulated and 693 down-regulated DEGs were
256
commonly expressed in both the Comparison II and III, respectively. It was observed
12
ACS Paragon Plus Environment
Page 13 of 43
Journal of Agricultural and Food Chemistry
257
that up-regulated DEGs in the Comparison I shared 46 DEGs with the down-regulated
258
DEGs of both the Comparison II and III (Supplementary Table S6). Among these DEGs,
259
the expression of several Fe uptake-related genes including ZmFer, ZmYS1, ZmZIP and
260
ZmNAS2 was up-regulated in the Comparison I, but the inoculation with NC16 notably
261
repressed their transcripts in both Comparison II and III (Fig. 4d), indicating that NC16
262
negatively regulated plant’s Fe acquisition systems. Moreover, the DEGs in the
263
Comparison III were functionally classified by the GO enrichment analysis, and were
264
categorized into biological process (BP), cellular component (CC) and molecular
265
function (MF) (Supplementary Fig. S2). In the BP category, most DEGs were involved
266
in the processes such as oxidation reduction, carbohydrate metabolism, transport and
267
photosynthesis. In the CC category, the majority of the DEGs were associated with
268
membrane, cell wall, apoplast and photosystem. In the MF category, the DEGs were
269
mainly related to oxidoreductase activity, transporter activity, heme binding and iron
270
ion binding. Additionally, the results of qRT-PCR analyses indicated that the
271
transcriptional patterns of some randomly selected genes were in accordance with
272
the RNA-Seq data (Supplementary Fig. S3).
273
Inoculation of maize plants with E. asburiae reduces Cd accumulation and its
274
translocation from roots to shoots
275
The content of Cd was firstly quantified in maize plants. Less Cd levels were found
276
in the NC16-inoculated plants compared with the controls (Fig. 5a). After 1 week of Cd
277
treatment, the inoculated shoots had 52% lower Cd content than the control shoots.
278
In roots, the Cd content of the control plants was about 30% higher than that of the
13
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 14 of 43
279
inoculated plants (Fig. 5a). The Cd translocation ratio to shoots (shoot Cd content/total
280
Cd amount) was significantly lower in inoculated plants than the controls
281
(Supplementary Fig. S4). Similarly, the inoculated plants had less Cd content (Fig. 5a)
282
and lower Cd translocation ratio (Supplementary Fig. S4) compared with the controls
283
after 5 weeks of Cd treatment. Furthermore, histochemical staining of Cd localization
284
showed that the inoculated with NC16 reduced reddish precipitates in the roots
285
compared with the controls after 1 week of Cd treatment (Fig. 5b).
286
In this study, Cd exposure led to up-regulation of ZmYS1 transcription and more
287
the release of the phytosiderophore DMA by maize roots, but these effects were
288
dramatically inhibited by NC16 (Fig. 5c,d). A similar trend was also observed for the
289
release of DMA under non-Cd stress. As shown in Fig. 5e, the content of Fe was
290
markedly higher in the Cd-treated roots than the non-Cd-treated roots, and the
291
inoculation of plants with NC16 reduced root Fe content under Cd stress. However, a
292
converse trend was observed for the shoots (Fig. 5f). There was no significant
293
difference in the shoot and root Fe levels between the control and inoculated plants
294
under non-Cd stress (Fig. 5e,f). Thus, the NC16-alleviated Cd toxicity in plants was not
295
involved in the strategy II responses including the release of DMA and ZmYS1 gene
296
expression but the strategy I-like Fe uptake pathways that likely impacted the entry
297
route of Cd.
298
E. asburiae increases host ABA levels via repression of its metabolism
299
As shown in Fig. 6a,b, the NC16-inoculated plants had more root ABA levels than
300
the controls under non-Cd stress after 48 h of inoculation. Similarly, upon exposure to
14
ACS Paragon Plus Environment
Page 15 of 43
Journal of Agricultural and Food Chemistry
301
Cd stress, the inoculated plants displayed 26% and 32% more shoot and root ABA
302
levels than the controls, respectively. However, NC16 was not able to synthesize ABA.
303
And the transcription of several ABA biosynthetic genes including ZmNCED, ZmABA1,
304
ZmAAO3 and ZmLOS5 in the plants was not notably induced by NC16 after 48 h of
305
treatments (Supplementary Fig. S5). Hence, the NC16-induced increases of host ABA
306
levels were neither attributable to bacterial secretion nor promotion of host ABA
307
synthesis.
308
We further tested whether regulation of ABA 8′-hydroxylase activity by NC16
309
mediated ABA levels in maize plants. For this reason, a split-root system was designed
310
as described above, in which the left chamber was inoculated into NC16 or not
311
inoculated as the controls. After 48 h of treatments, the roots were incubated with
312
3H-ABA.
313
of 3H-ABA compared with the controls (Fig. 6c). Consistently, the production of 3H-PA
314
was distinctly decreased in the inoculated plants (Fig. 6d). These data indicated that
315
the inoculation of plants with NC16 remarkably increased host ABA levels by inhibiting
316
its metabolism.
317
Inhibited host uptake of Fe by E. asburiae confers increased Cd resistance
After 24 h of incubation, the inoculation with NC16 reduced the metabolism
318
To test whether ABA was involved in the NC16-alleviated Cd toxicity in plants, we
319
examined the effects of NC16 on Cd levels in plants exposed to 10 μM fluridon (FLU),
320
an ABA biosynthetic inhibitor. Alleviation of Cd toxicity in the Cd-treated plants after
321
NC16 exposure was not found in the FLU-treated plants, as evidenced by stronger
322
inhibition of root growth and lower biomass (Fig. 7a-c). FLU exposure greatly 15
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 16 of 43
323
weakened the NC16-indcued decreases of Cd levels in plants (Fig. 7d). Stomatal
324
apertures of the inoculated plants were reduced by 30% compared with the controls
325
after 48 h of Cd treatment, while that of the inoculated plants were not significantly
326
differed from the controls under non-Cd stress (Fig. 7e). In accordance to the changes
327
of stomatal apertures, the inoculation with NC16 increased leaf surface temperature
328
and reduced transpiration rates compared with the controls, although that was
329
markedly attenuated in the Cd-treated plants after FLU exposure (Fig. 7f,g).
330
Furthermore, treatment with ABA alone could obviously mitigate Cd toxicity in plants
331
(Fig. 7a-d). We thus concluded that the roles of NC16 in reducing Cd toxicity in plants
332
were positively associated with the actions of ABA.
333
As aforementioned, the data of RNA-Seq analyses showed that the transcription
334
of some Fe uptake-related genes in plants was strikingly lower in the inoculated plants
335
than the controls under Cd stress, indicating that reduced uptake of Cd by host plants
336
may be tightly related to the Fe uptake-associated genes. To verify this assumption,
337
we thus probed the impacts of NC16 on the expression of Fe uptake-related genes
338
including ZmFer, ZmYS1, ZmZIP and ZmNAS2 in the Cd-treated plants. The inoculation
339
with NC16 remarkably reduced the transcription of these Fe uptake-associated genes
340
in the Cd-treated roots compared with the controls. Nevertheless, FLU treatments
341
abrogated the inhibition of NC16 on these Fe uptake-related genes (Supplementary
342
Fig. S6). Furthermore, the capacity of NC16 to reduce Cd toxicity was largely
343
attenuated in ZmZIP-overexpressing (ZIP-ox) plants. Upon exposure to Cd stress, the
344
ZIP-ox plants had lower biomass and more Cd levels than the wild-type plants in the
16
ACS Paragon Plus Environment
Page 17 of 43
Journal of Agricultural and Food Chemistry
345
presence of NC16 (Fig. 7c,d). These results strongly indicated that the NC16-mediated
346
repression of the zinc/iron transporter contributed to lower Cd accumulation, thus
347
reducing Cd toxicity in maize plants.
348
Discussion
349
Considerable efforts have recently been focused on ameliorating Cd toxicity in
350
crop plants by manipulation of soil Cd-tolerant bacteria.3,10,22,26 However, it remains
351
largely unknown whether rhizobacteria can directly regulate host hormone levels and
352
that the molecular mechanisms underlying the rhizobacteria prevent Cd uptake by
353
host plants. In this study, inoculation of maize plants with E. asburiae NC16
354
substantially reduced Cd levels. NC16-mediated suppression of host ABA metabolism
355
conferred increased cellular ABA levels, thereby impeding Cd absorption through
356
modulation of Fe uptake-related pathways.
357
Cd stress often leads to inhibition of plant growth, reduction of chlorophyll
358
content, and destruction of the intracellular structures of chloroplasts, manifesting by
359
reduction of chloroplast number, size and grana stacking.37,38 In accordance to
360
previous studies on the toxic effects of Cd stress, total chlorophyll levels were
361
obviously decreased in the Cd-treated leaves. At the ultrastructural level, Cd stress
362
seriously affects the photosynthetic apparatus with abnormal chloroplast structures
363
such as chloroplast shape and swollen thylakoids. The impact of abiotic stress on the
364
photosynthesis is severed as a key indicator of plant adaption to adverse stresses.3,17,22
365
Compared with the controls, the inoculation of maize plants with NC16 had higher
366
chlorophyll levels, Fv/Fm, and better chloroplast development under Cd stress,
17
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 18 of 43
367
indicating that this strain could improve the adaptation of plants to Cd stress. It has
368
well been shown that Cd toxicity is mainly resulted from the dysfunction of essential
369
nutrient uptake, especially Fe nutritional status since the chlorotic symptoms and
370
molecular responses imposed by Cd stress share the similarity to a certain extent with
371
those induced by Fe deficiency.8 Accordantly, it was observed here that the expression
372
levels of Fe acquisition-related genes were evidently increased in the Cd-treated roots.
373
Cd stress markedly decreased shoot Fe levels, but increased in roots, which was in
374
concert with the earlier study reported by Wang et al.39
375
Improved Fe acquisition has recently been shown to enhance the resistance of
376
plants to Cd stress.17,40 Arabidopsis plants co-overexpressing of FIT with bHLH38 or
377
bHLH39 exhibit promoted Fe assimilation and its root-to-shoot translocation, and
378
enhanced Cd sequestration in roots, thus conferring the strong tolerance of plants to
379
Cd stress.40 Increased Fe supply or source can also enhance Cd tolerance in plants by
380
reducing Cd absorption.40-42 In this study, higher shoot and less root Fe content was
381
found in the NC16-inoculated plants than the controls under Cd stress, while shoot
382
and root Cd levels were notably lower in the inoculated plants. It has previously been
383
demonstrated that NA plays a key role in protecting plants from Cd toxicity.40,43
384
Increased NA levels can promote the Fe translocation from roots to shoots, and
385
augment the Fe levels in shoots.40,43,44 However, the inoculation with NC16 lowered
386
the transcription of ZmNAS2, encoding a putative NA synthase, in maize plants
387
compared with the controls. We further observed that the inoculation of maize plants
388
with NC16 did not affect the Fe uptake, but increased shoot Fe accumulation under
18
ACS Paragon Plus Environment
Page 19 of 43
Journal of Agricultural and Food Chemistry
389
Cd stress. Thus, the effects of NC16-inoculation observed here were not attributable
390
to the ZmNAS2-mediated Fe uptake and translocation of Cd-treated plants.
391
The bioavailability of Cd in soils is a pivotal factor influencing plant uptake of Cd.45
392
However, the inoculation with NC16 did not impact the Cd availability in the soils
393
(Supplementary Fig. S7). These findings were similar to that reported by a recent study,
394
in which soil inoculation with beneficial microbes such as B. subtilis and A. brasilense
395
did not result in a significant increase in the availability of Cd.22 Hence, the NC16-
396
alleviated Cd toxicity in plants was likely resulted from the prevention of Cd entry into
397
the roots. Mounting evidence indicates that the increased ABA levels can improve Cd
398
tolerance in Arabidopsis and rice.10,46 We thus probed whether the NC16-induced Cd
399
tolerance of plants was tightly related to the changes of cellular ABA levels. As
400
expected, the content of ABA was much higher in the inoculated plants than the
401
controls after Cd treatment. Furthermore, the ABA biosynthetic inhibitor FLU
402
abrogated the effects of NC16 on mitigating Cd toxicity in plants. In view of the results,
403
the ABA-dependent pathways was essential for the NC16-induced inhibition of Cd
404
uptake by host plants, which was further supported by recent studies, in which
405
elevation of plant ABA levels strikingly lowed Cd levels by application of exogenous
406
ABA or ABA-generating bacteria.3,10,22 However, we found that NC16 was not able to
407
secrete and synthesize ABA. Thus, it was possible that the biosynthetic and metabolic
408
pathways of ABA in host plants were mediated by NC16. However, we found that the
409
transcription of ABA biosynthetic genes was not significantly induced by NC16. It has
410
previously been indicated that the ABA 8′-hydroxylase is essential for the metabolism
19
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 20 of 43
411
of ABA in plants, thereby fine tuning cellular ABA levels.47,48 We thus examined
412
whether regulation of host ABA levels was attributable to the NC16-induced inhibition
413
of ABA metabolism. Our data showed that the converting ability of ABA into PA was
414
much lower in the inoculated plants than in the non-inoculated plants, implying that
415
the activities of ABA 8′-hydroxylase were markedly repressed in the inoculated plants.
416
Thus, NC16 could mediate host ABA metabolism rather than regulate its synthesis.
417
Indeed, the biosynthesis of ABA is involved in a series of ABA biosynthetic genes such
418
as NCED, ABA1, AAO3, and LOS5, and upregulation of the single gene cannot
419
considerably increase ABA levels.49,50 These findings provided important evidence that
420
rhizobacteria regulated the metabolic and physiological processes of host plants
421
preferentially by operating more critical pathways during plant-microbe interactions.
422
We deeply explored the potential mechanisms underlying the inoculation with
423
NC16 reduced Cd toxicity in maize plants. It has previously been shown that
424
exogenous application of ABA in rice enhances Cd tolerance with decreased Cd
425
content by inhibiting transpiration rates.46 Cd translocation from roots to shoots can
426
be driven by leaf transpiration. Reduced transpiration rates is thus conducive to
427
repressing the root-to-shoot transportation of Cd, which has been suggested to be a
428
crucial mechanism of Cd tolerance in plants.46 In this study, the NC16-inoculated
429
plants had smaller stomatal apertures than the controls under Cd stress, which
430
resulted in higher leaf temperature and lower transpiration rates. Moreover, the
431
effects of FLU treatments on the NC16-inoculated plants indicated that the
432
transpiration rates and Cd levels were substantially increased. These results indicated
20
ACS Paragon Plus Environment
Page 21 of 43
Journal of Agricultural and Food Chemistry
433
that higher ABA levels in the inoculated plants contributed to the decrease in
434
transpiration rates and Cd levels, thereby increasing the resistance of plants to Cd
435
stress.
436
Besides reduction of the transpiration rates, the NC16-induced increases of ABA
437
levels in maize may provoke an alternative complement pathway for lowering Cd
438
sensitivity. In Strategy I plants, the Fe2+ transporter IRT1 has been recognized as a key
439
transport route for Cd uptake in Fe-deficient plants.10 It is well documented that ABA
440
plays a negative role in regulating the Arabidopsis IRT1, thereby conferring the strong
441
resistance of plants to Cd stress.10 Recently, the identification of IRT orthologs in
442
Strategy II plants, rice (OsIRT1 and OsIRT2) and maize (ZmIRT1 and ZmZIP3) has also
443
been shown to function as Fe2+ transporters,13,14 which raise a question whether these
444
transporters lead to Cd sensitivity in graminaceous species. In fact, heterologous
445
expression of root-specific OsIRT1 and OsIRT2 markedly enhances Cd uptake in
446
yeast.51 To alleviate Cd stress-induced Fe deficiency, graminaceous plants have
447
adopted an alternative mechanism of root-secreted PS to chelate Fe.11 Transgenic
448
Arabidopsis expressing ZmYS1 exhibits greater growth performance under Cd stress.12
449
However, decreased Cd toxicity in the NC16-inoculated plants appeared not to be
450
associated with the function of ZmYS1. Because the inoculation with NC16 did not
451
upregulate the expression of ZmYS1, on the contrary, lowered its transcripts in the Cd-
452
treated roots. Likely, the inoculated plants experienced less Cd-induced Fe deficiency,
453
thus mildly activating the expression of ZmYS1 for chelating Fe, as evidenced by higher
454
shoot Fe levels in the inoculated plants. Intriguingly, the transcription of some strategy
21
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 22 of 43
455
I-like Fe uptake-related genes including ZmFer and ZmZIP was markedly repressed in
456
the Cd-treated roots exposed to NC16. So this problem was whether there existed a
457
conserved mechanism in maize plants that ABA blocked plant uptake of Cd via
458
repression of the zinc/iron-regulated transporters ZIPs or IRTs. To verify this
459
hypothesis, we examined the effects of NC16-inoculation on plants overexpressing
460
ZmZIP under Cd stress. We found that the inoculation with NC16 failed to reduction
461
of Cd accumulation in the transgenic plants. Connolly et al. (2002) have previously
462
reported that Arabidopsis plants overexpressing IRT1 display greater sensitivity to Cd
463
stress than the wild-type plants, due to higher accumulation of Cd in the tissue.52
464
Therefore, our findings provided key evidence that the zinc/iron transporter play an
465
essential role in the mechanisms whereby NC16 inhibited the absorption of Cd by
466
plants.
467
In conclusion, although previous studies have explored the applications of soil
468
microbe-induced Cd resistance in crop plants, the underlying mechanisms are rarely
469
clear. In this study, a model is proposed for the NC16-alleviated Cd toxicity in maize
470
plants (Fig. 8), in which Cd stress stimulates the expression of Fe uptake-related genes
471
and thus promotes Cd accumulation in plants. However, the inoculation with NC16
472
can repress host ABA metabolism, and in turn increase ABA levels, contributing to
473
reduction of transpiration rates. We also unravel other key mechanisms whereby the
474
interdiction of host Cd uptake by NC16 is dependent on the ABA-mediated inhibition
475
of Fe uptake transporters such as ZmZIP. Therefore, application of the Cd-tolerant
476
bacteria E. asburiae will be a feasible way to lower Cd accumulation in crop plants.
22
ACS Paragon Plus Environment
Page 23 of 43
477
Journal of Agricultural and Food Chemistry
Acknowledgments
478
This work was supported by the National Natural Science Foundation of China
479
(31600210), China Postdoctoral Science Foundation (2017M620214), the Key
480
Research Project of the Anhui Science and Technology Committee (16030701102) and
481
the Natural Science Foundation of Education Department of Anhui province
482
(KJ2018ZD051).
483
Supporting Information Available: [Fig. S1 The colonization abilities of E. asburiae
484
NC16 in the rhizosphere of maize plants; Fig. S2 GO enrichment analysis of
485
differentially expressed genes (DEGs) in the Comparison III (+NC16+Cd vs +Cd); Fig. S3
486
qRT-PCR analyses of nine randomly selective genes from the DEGs among different
487
treatments; Fig. S4 Effects of E. asburiae NC16 on the translocation ratio of Cd to
488
shoots; Fig. S5 Effects of E. asburiae NC16 on the transcription of the ABA biosynthetic
489
genes in maize plants; Fig. S6 Effects of FLU treatments on the expression of Fe uptake-
490
related genes in NC16-inoculated maize plants under Cd stress; Fig. S7 Effects of E.
491
asburiae NC16 on the bioavailability of Cd in Cd-polluted soils; Table S1
492
Physicochemical properties of soil samples; Table S2 Primers used in this study; Table
493
S3 Up- and down-regulated DEGs in the Comparison I (+Cd vs –Cd); Table S4 Up- and
494
down-regulated DEGs in the Comparison II (+NC16-Cd vs –Cd); Table S5 Up- and down-
495
regulated DEGs in the Comparison III (+NC16+Cd vs +Cd); Table S6 Analyses of shared
496
DEGs between up-regulated DEGs of the Comparison I and down-regulated DEGs of
497
both the Comparison II and III].
498
23
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 24 of 43
499
References
500
(1) Sarwar, N.; Imran, M.; Shaheen, M.R.; Ishaque, W.; Kamran, M.A.; Matloob, A.
501
Phytoremediation strategies for soils contaminated with heavy metals:
502
modifications and future perspectives. Chemosphere 2017, 171, 710–721.
503
(2) Rahman, M.F.; Ghosal, A.; Alam, M.F.; Kabir, A.H. Remediation of cadmium
504
toxicity in field peas (Pisum sativum L.) through exogenous silicon. Ecotoxicol.
505
Environ. Saf. 2017, 135, 165–172.
506
(3) Pan, W.; Lu, Q.; Xu, Q.R.; Zhang, R.R.; Li, H.Y.; Yang, Y.H.; Liu, H.J.; Du, S.T. Abscisic
507
acid-generating bacteria can reduce Cd concentration in pakchoi grown in Cd-
508
contaminated soil. Ecotoxicol. Environ. Saf. 2019, 177, 100-107.
509 510
(4) Pulford, I.D.; Watson, C. Phytoremediation of heavy metal contaminated land by trees-a review. Environ. Int. 2003, 29, 529−540.
511
(5) Schützendübel, A.; Polle, A. Plant responses to abiotic stresses: heavy metal-
512
induced oxidative stress and protection by mycorrhization. J. Exp. Bot. 2002, 53,
513
1351−1365.
514 515
(6) Clemens, S. Toxic metal accumulation, responses to exposure and mechanisms of tolerance in plants. Biochimie 2006, 88, 1707−1719.
516
(7) Hazama, K.; Nagata, S.; Fujimori, T.; Yanagisawa, S.; Yoneyama, T. Concentrations
517
of metals and potential metal-binding compounds and speciation of Cd, Zn and
518
Cu in phloem and xylem saps from castor bean plants (Ricinus communis) treated
519
with four levels of cadmium. Physiol. Plant. 2015, 154, 243−255.
520
(8) Astolfi, S.; Ortolani, M.R.; Catarcione, G.; Paolacci, A.R.; Cesco, S.; Pinton, R.; Ciaffi,
24
ACS Paragon Plus Environment
Page 25 of 43
Journal of Agricultural and Food Chemistry
521
M. Cadmium exposure affects iron acquisition in barley (Hordeum vulgare)
522
seedlings. Physiol. Plant. 2014, 152, 646–659.
523 524
(9) Aksoy, E.; Koiwa, H. Function of Arabidopsis CPL1 in cadmium responses. Plant Signal. Behav. 2013, 8, e24120.
525
(10) Fan, S.K.; Fang, X.Z.; Guan, M.Y.; Ye, Y.Q.; Lin, X.Y.; Du, S.T.; Jin, C.W. Exogenous
526
abscisic acid application decreases cadmium accumulation in Arabidopsis plants,
527
which is associated with the inhibition of IRT1-mediated cadmium uptake. Front.
528
Plant Sci. 2014, 5, 721.
529
(11) Hill, K.A.; Lion, L.W.; Ahner, B.A. Reduced Cd accumulation in Zea mays: a
530
protective role for phytosiderophores? Environ. Sci. Technol. 2002, 36, 5363–5368.
531
(12) Meda, A.R.; Scheuermann, E.B.; Prechsl, U.E.; Erenoglu, B.; Schaaf, G.; Hayen, H.;
532
Weber, G.; von Wirén, N. Iron acquisition by phytosiderophores contributes to
533
cadmium tolerance. Plant Physiol. 2007, 143, 1761–1773.
534 535
(13) Li, S.; Zhou, X.; Chen, J.; Chen, R. Is there a strategy I iron uptake mechanism in maize? Plant Signal. Behav. 2018, 13, e1161877.
536
(14) Ishimaru, Y.; Suzuki, M.; Tsukamoto, T.; Suzuki, K.; Nakazono, M.; Kobayashi, T.;
537
Wada, Y.; Watanabe, S.; Matsuhashi, S.; Takahashi, M.; Nakanishi, H.; Mori,
538
S.; Nishizawa, N.K. Rice plants take up iron as an Fe3+-phytosiderophore and as
539
Fe2+. Plant J. 2006, 45, 335–346.
540
(15) Hernández-Calderón, E.; Aviles-Garcia, M.E.; Castulo-Rubio, D.Y.; Macías-
541
Rodríguez, L.; Ramírez, V.M.; Santoyo, G.; López-Bucio, J.; Valencia-Cantero, E.
542
Volatile compounds from beneficial or pathogenic bacteria differentially regulate
25
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 26 of 43
543
root exudation, transcription of iron transporters, and defense signaling pathways
544
in Sorghum bicolor. Plant Mol. Biol. 2018, 96, 291–304.
545
(16) Zhou, C.; Li, F.; Xie, Y.; Zhu, L.; Xiao, X.; Ma, Z.; Wang, J. Involvement of abscisic
546
acid in microbe-induced saline-alkaline resistance in plants. Plant Signal. Behav.
547
2017, 12, e1367465.
548
(17) Zhou, C.; Zhu, L.; Ma, Z.; Wang, J. Bacillus amyloliquefaciens SAY09 increases
549
cadmium resistance in plants by activation of auxin-mediated signaling pathways.
550
Genes, 2017, 8, 173.
551
(18) Liu, Y.; Chen, L.; Zhang, N.; Li, Z.; Zhang, G.; Xu, Y.; Shen, Q.; Zhang, R. Plant-
552
microbe communication enhances auxin biosynthesis by a root-associated
553
bacterium, Bacillus amyloliquefaciens SQR9. Mol. Plant-Microbe Interact. 2016,
554
29, 324−330.
555
(19) Zhou, C.; Zhu, L.; Guo, J.; Xiao, X.; Ma, Z.; Wang, J. Bacillus subtilis STU6
556
ameliorates iron deficiency in tomato by enhancement of polyamine-mediated
557
iron remobilization. J. Agric. Food Chem. 2019, 67, 320−330.
558
(20) Zhou, C.; Guo, J.; Zhu, L.; Xiao, X.; Xie, Y.; Zhu, J.; Ma, Z.; Wang, J. Paenibacillus
559
polymyxa BFKC01 enhances plant iron absorption via improved root systems and
560
activated iron acquisition mechanisms. Plant Physiol. Biochem. 2016, 105,
561
162−173.
562
(21) Liu, Y.; Tie, B.; Li, Y.; Lei, M.; Wei, X.; Liu, X.; Du, H. Inoculation of soil with
563
cadmium-resistant bacterium Delftia sp. B9 reduces cadmium accumulation in
564
rice (Oryza sativa L.) grains. Ecotoxicol. Environ. Saf. 2018, 163, 223−229.
26
ACS Paragon Plus Environment
Page 27 of 43
Journal of Agricultural and Food Chemistry
565
(22) Xu, Q.; Pan, W.; Zhang, R.; Lu, Q.; Xue, W.; Wu, C.; Song, B.; Du, S. Inoculation with
566
Bacillus subtilis and Azospirillum brasilense produces abscisic acid that reduces
567
Irt1-mediated cadmium uptake of roots. J. Agric. Food Chem. 2018, 66,
568
5229−5236.
569
(23) Cao, M.J.; Liu, X.; Zhang, Y.; Xue, X. Q.; Zhou, X.E.; Melcher, K.; Gao, P.; Wang, F.X.;
570
Zeng, L.; Zhao, Y.; Zhao, Y.; Deng, P.; Zhong, D.F.; Zhu, J.K.; Xu, H.E.; Xu, Y. An ABA-
571
mimicking ligand that reduces water loss and promotes drought resistance in
572
plants. Cell Res. 2013, 23, 1043−1054.
573
(24) Cao, M.J.; Zhang, Y.L.; Liu, X.; Huang, H.; Zhou, X.E.; Wang, W.L.; Zeng, A.; Zhao,
574
C.Z.; Si, T.; Du, J.M.; Wu, W.W.; Wang, F.X.; Xu, H.E.; Zhu, J.K. Combining chemical
575
and genetic approaches to increase drought resistance in plants. Nat. Commun.
576
2017, 8, 1183.
577
(25) Belimov, A.A.; Dodd, I.C.; Safronova, V.I.; Dumova, V.A.; Shaposhnikov, A.I.;
578
Ladatko, A.G.; Davies, W.J. Abscisic acid metabolizing rhizobacteria decrease ABA
579
concentrations in planta and alter plant growth. Plant Physiol. Biochem. 2014, 74,
580
84−91.
581
(26) Lin, X.; Mou, R.; Cao, Z.; Xu, P.; Wu, X.; Zhu, Z.; Chen, M. Characterization of
582
cadmium-resistant bacteria and their potential for reducing accumulation of
583
cadmium in rice grains. Sci. Total Environ. 2016, 569-570, 97-104
584
(27) Wang, L.; Wang, H.L.; Yin, L.; Tian, C.Y. Transcriptome assembly in Suaeda
585
aralocaspica to reveal the distinct temporal gene/miRNA alterations between the
586
dimorphic seeds during germination. BMC Genomics 2017, 18, 806.
27
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 28 of 43
587
(28) Li, B.; Wei, A.; Song, C.; Li, N.; and Zhang, J.R. Heterologous expression of the TsVP
588
gene improves the drought resistance of maize. Plant Biotechnol. J. 2008, 6, 146–
589
159.
590
(29) Lei, G.J.; Zhu, X.F.; Wang, Z.W.; Dong, F.; Dong, N.Y.; Zheng, S.J. Abscisic acid
591
alleviates iron deficiency by promoting root iron reutilization and transport from
592
root to shoot in Arabidopsis. Plant Cell Environ. 2014, 37, 852–863.
593
(30) Houba, V.J.G.; Temminghoff, E.J.M.; Gaikhorst, G.A.; van Vark, W. Soil analysis
594
procedures using 0.01 M calcium chloride as extraction reagent. Commun. Soil Sci.
595
Plant Anal. 2000, 31, 1299−1396.
596 597
(31) Brennan, T.; Frenkel, C. Involvement of hydrogen peroxide in the regulation of senescence in pear. Plant Physiol. 1977, 59, 411–416.
598
(32) Quan, R.D.; Shang, M.; Zhang, H.; Zhao, Y.X.; Zhang, J.R. Improved chilling
599
tolerance by transformation with betA gene for the enhancement of
600
glycinebetaine synthesis in maize. Plant Sci. 2004, 166, 141–149.
601
(33) Shou, H.X.; Bordallo, P.; Fan, J.B.; Yeakley, J.M.; Bibikova, M.; Sheen, J.; Wang, K.
602
Expression of an active tobacco mitogen-activated protein kinase kinase kinase
603
enhances freezing tolerance in transgenic maize. Proc. Natl. Acad. Sci. USA 2004,
604
101, 3298–3303.
605
(34) Porra, R.J. The chequered history of the development and use of simultaneous
606
equations for the accurate determination of chlorophylls a and b. Photosynth. Res.
607
2002, 73, 149–156.
608
(35) Yang, J.C.; Zhang, J.H.; Wang, Z.Q.; Zhu, Q.S.; Wang, W. Hormonal changes in the
28
ACS Paragon Plus Environment
Page 29 of 43
Journal of Agricultural and Food Chemistry
609
grains of rice subjected to water stress during grain filling. Plant Physiol. 2001, 127,
610
315–323.
611
(36) Wang, Z.; Mambelli, S.; Setter, T.L. Abscisic acid catabolism in maize kernels in
612
response to water deficit at early endosperm development. Ann Bot. 2002, 90,
613
623–630.
614
(37) Vaculík, M.; Pavlovič, A.; Lux, A. Silicon alleviates cadmium toxicity by enhanced
615
photosynthetic rate and modified bundle sheath's cell chloroplasts ultrastructure
616
in maize. Ecotoxicol. Environ. Saf. 2015, 120, 66–73.
617
(38) Lysenko, E.A.; Klaus, A.A.; Pshybytko, N.L.; Kusnetsov, V.V. Cadmium
618
accumulation in chloroplasts and its impact on chloroplastic processes in barley
619
and maize. Photosynth. Res. 2015, 125, 291-303.
620
(39) Wang, M.; Zou, J.; Duan, X.; Jiang, W.; Liu, D. Cadmium accumulation and its
621
effects on metal uptake in maize (Zea mays L.). Bioresour. Technol. 2007, 98, 82–
622
88.
623
(40) Wu, H.; Chen, C.; Du, J.; Liu, H.; Cui, Y.; Zhang, Y.; He, Y.; Wang, Y.; Chu, C.; Feng,
624
Z.; Li, J.; Ling, H.Q. Co-overexpression FIT with AtbHLH38 or AtbHLH39 in
625
Arabidopsis enhanced cadmium tolerance via increased cadmium sequestration
626
in roots and improved iron homeostasis of shoots. Plant Physiol. 2012, 158, 790–
627
800.
628 629 630
(41) Sebastian, A.; Prasad, M.N. Iron plaque decreases cadmium accumulation in Oryza sativa L. and serves as a source of iron. Plant Biol. (Stuttg) 2016, 18, 1008–1015. (42) Chen, Z.; Tang, Y.T.; Yao, A.J.; Cao, J.; Wu, Z.H.; Peng, Z.R.; Wang, S.Z.; Xiao, S.;
29
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 30 of 43
631
Baker, A.J.M.; Qiu, R.L. Mitigation of Cd accumulation in paddy rice (Oryza sativa
632
L.) by Fe fertilization. Environ. Pollut. 2017, 23, 549–559.
633
(43) Koen, E.; Besson-Bard, A.; Duc, C.; Astier, J.; Gravot, A.; Richaud, P.; Lamotte, O.;
634
Boucherez, J.; Gaymard, F.; Wendehenne, D. Arabidopsis thaliana nicotianamine
635
synthase 4 is required for proper response to iron deficiency and to cadmium
636
exposure. Plant Sci. 2013, 209, 1–11.
637
(44) Palmer, C.M.; Hindt, M.N.; Schmidt, H.; Clemens, S.; Guerinot, M.L. MYB10 and
638
MYB72 are required for growth under iron-limiting conditions. PLoS Genet. 2013,
639
9, e1003953.
640 641 642 643
(45) McBride, M.B. Cadmium uptake by crops estimated from soil total Cd and pH. Soil Sci. 2002, 167, 62−67. (46) Hsu, Y.T.; Kao, C.H. Role of abscisic acid in cadmium tolerance of rice (Oryza sativa L.) seedlings. Plant Cell Environ. 2003, 26, 867–874.
644
(47) Liu, S.; Lv, Y.; Wan, X.R.; Li, L.M.; Hu, B.; Li, L. Cloning and expression analysis of
645
cDNAs encoding ABA 8'-hydroxylase in peanut plants in response to osmotic
646
stress. PLoS One 2014, 9, e97025.
647
(48) Brugière, N.; Zhang, W.; Xu, Q.; Scolaro, E.J.; Lu, C.; Kahsay, R.Y.; Kise, R.; Trecker,
648
L.; Williams, R.W.; Hakimi, S.; Niu, X.; Lafitte, R.; Habben, J.E. Overexpression of
649
RING Domain E3 Ligase ZmXerico1 confers drought tolerance through regulation
650
of ABA homeostasis. Plant Physiol. 2017, 175, 1350–1369.
651
(49) Yue, Y.; Zhang, M.; Zhang, J.; Tian, X.; Duan, L.; Li Z. Overexpression of the AtLOS5
652
gene increased abscisic acid level and drought tolerance in transgenic cotton. J.
30
ACS Paragon Plus Environment
Page 31 of 43
653 654 655
Journal of Agricultural and Food Chemistry
Exp. Bot. 2012, 63, 3741−3748. (50) Nambara, E.; Marion-Poll, A. Abscisic acid biosynthesis and catabolism. Annu. Rev. Plant. Biol. 2005, 56, 165−185.
656
(51) Nakanishi, H.; Ogawa, I.; Ishimaru, Y.; Mori, S.; Nishizawa, N.K. Iron deficiency
657
enhances cadmium uptake and translocation mediated by the Fe2+ transporters
658
OsIRT1 and OsIRT2 in rice. Soil Sci. Plant Nutr. 2006, 52, 464–469.
659
(52) Connolly, E.L.; Fett, J.P.; Guerinot, M.L. Expression of the IRT1 metal transporter
660
is controlled by metals at the levels of transcript and protein accumulation. Plant
661
Cell, 2002, 14, 1347–1357.
31
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 32 of 43
662
Figure captions
663
Fig. 1 Effects of inoculating maize roots with E. asburiae NC16 on plant growth. Maize
664
seedlings were grown in Cd-polluted soils and were inoculated with cell suspensions
665
of NC16. After 2 weeks of Cd treatment, plant growth was monitored, including (a)
666
plant phenotypes, (b) dry weights, and (c) chlorophyll content. -Cd, non-Cd treatment;
667
+Cd, Cd treatment; -NC16, no inoculation with NC16; +NC16, inoculation with NC16.
668
Error bars represent ± SD (n = 3), and different letters show significant difference
669
at p < 0.05.
670
Fig. 2 Effects of E. asburiae NC16 on maize adaptation to Cd stress. In the split-root
671
system, the left chamber was poured with cell suspensions of NC16 (+NC16), and that
672
without bacterial inoculation was used as the controls (-NC16). (a) 10-d-old maize
673
seedlings were transplanted to the split-root system with or without bacterial
674
suspensions, and were treated with 0 (-Cd) or 0.3 mM Cd2+ (+Cd). After 5 weeks of
675
treatments, plant growth performance were assessed, including (b) plant phenotypes,
676
(c) root growth status, (d) shoot and (e) root dry weights, (f) H2O2 content, (g) EL and
677
(h) MDA values. Error bars represent ± SD (n = 3), and different letters show significant
678
difference at p < 0.05.
679
Fig. 3 Effects of E. asburiae NC16 on plant photosynthesis under Cd stress. 10-d-old
680
maize seedlings were transplanted to the split-root system with or without cell
681
suspensions of NC16, and were subjected to 0 (-Cd) or 0.3 mM Cd2+ (+Cd). (a)
682
Chlorophyll content and (b) Fv/Fm were measured after 5 weeks of treatments. In
683
addition, (c) TEM observation of chloroplasts in both the mesophyll and bundle sheath
32
ACS Paragon Plus Environment
Page 33 of 43
Journal of Agricultural and Food Chemistry
684
cells was conducted. Error bars represent ± SD (n = 3), and different letters show
685
significant difference at p < 0.05.
686
Fig. 4 Transcriptome analyses of E. asburiae NC16-inoculated roots exposed to non-
687
Cd or Cd stress. 10-d-old maize seedlings were transplanted to the split-root system
688
with or without bacterial suspensions (-NC16 or +NC16), and were suffered from 0 or
689
0.3 mM Cd2+ (+Cd) treatments. (a) After 48 h of treatments, root tissues were
690
harvested for comparative transcriptome analyses, including Comparison I (+Cd vs -
691
Cd), II (+NC16-Cd vs -Cd), and III (+NC16+Cd vs +Cd). (b) Statistics of up- and down-
692
regulated DEGs. (c) Venn diagram indicating shared and specific DEGs among up- and
693
down-regulated DEGs. (d) Transcription profiles of some Fe uptake-related genes
694
(ZmFer, ZmYS1, ZmZIP and ZmNAS2) in different treatments.
695
Fig. 5 Effects of E. asburiae NC16 on the absorption of Cd and Fe in maize plants. (a)
696
After 1 week and 5 weeks of Cd treatment, the content of Cd in both non-inoculated
697
and NC16-inoculated plants grown in the split-root system was measured. (b) After 1
698
week of Cd treatment, in vivo localization of Cd in the roots was imaged. (c) After 12
699
and 24 h of Cd treatment, the expression levels of ZmYS1 in the roots were quantified
700
in the plants by qRT-PCR. (d) Rates of DMA release within 24 h from the roots grown
701
in the split-root system. After 5 weeks of Cd treatment, (e) shoot and (f) root Fe
702
contents in plants grown in the split-root system was quantified. Error bars represent
703
± SD (n = 3), and different letters show significant difference at p < 0.05.
704
Fig. 6 Effects of E. asburiae NC16 on the ABA content and its metabolism in maize
705
plants. After 48 h of inoculation, the content of ABA in the (a) shoots and (b) roots of
33
ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 34 of 43
706
plants grown in the split-root system was determined under non-Cd or Cd stress. The
707
metabolism of ABA in plants subjected to different treatments was further examined.
708
Changes of (c) 3H-ABA catabolized to (d) PA in different treatments were compared
709
after 24 h of incubation. Error bars represent ± SD (n = 3), and different letters show
710
significant difference at p < 0.05.
711
Fig. 7 Effects of ABA on the E. asburiae NC16-mediated Cd stress responses in maize
712
plants. In the split-root system, 10-d-old wild-type or ZmZIP-overexpressing (ZIP-ox)
713
plants were treated with or without 5 μM ABA, 10 μM FLU and NC16 at the final
714
concentration of 5 X 107 CFU mL-1 upon exposure to 0.3 mM Cd2+ (+Cd). After 5 weeks
715
of Cd treatment, plant growth was evaluated, including (a) plant phenotypes, (b) root
716
growth, and (c) plant dry weights. The content of Cd was quantified in the plants after
717
1 week and 5 weeks of Cd treatment, respectively (d). After 48 h of treatments, (e)
718
stomatal apertures, (f) transpiration rates and (g) leaf surface temperature were
719
examined in the plants treated with NC16 and/or FLU under Cd stress. Error bars
720
represent ± SD (n = 3), and different letters show significant difference at p < 0.05.
721
Fig. 8 A proposed model unraveling the mechanisms of E. asburiae NC16-mitigated Cd
722
toxicity in maize plants. Inoculation of plants with NC16 represses host ABA
723
metabolism and thus increases its levels, thereby reducing transpiration rates. The
724
increased ABA levels can inhibit the transcription of Fe uptake-related genes such as
725
ZmZIP encoding a putative zinc/iron transporter. The impacts of NC16-inoculation
726
observed further contribute to ameliorated Cd toxicity in plants.
34
ACS Paragon Plus Environment
Page 35 of 43
Journal of Agricultural and Food Chemistry
Fig. 1
(a)
- NC16
+ NC16
(b)
Shoots
- Cd
Dry weight (mg plant -1 )
200
+ Cd
Chlorophyll content (mg g-1 FW)
(c)
160
Roots
a
a
b
120
c
80
d
d
40
e
f
0
3
a
a
2.5
b
2 1.5 1 0.5 0
ACS Paragon Plus Environment
c
Journal of Agricultural and Food Chemistry
Fig. 2 (a)
(b)
- NC16
+ NC16
- Cd
- NC16
(g)
+ Cd
0.4
b
0.2
(h)
60
0
a
a
2 b
1
c
0
a
30 20
b c
10
c
0
a
45 EL (%)
c
0
15
3
+ Cd
40
a
H2O2 content (μmol g-1 FW)
a
0.6
30
- NC16
(f)
b c
c
MDA content (μmol g-1 FW)
Root dry weight (g plant-1)
0.8
+ NC16
- Cd
(d) Shoot dry weight (g plant-1)
+ NC16
(e)
- NC16
+ NC16
- NC16
(c)
+ NC16
Page 36 of 43
a
50 40
b
30 20 10 0
ACS Paragon Plus Environment
c
c
Page 37 of 43
Journal of Agricultural and Food Chemistry
Fig. 3
4 3
a
1 a b
2
a
0.8 c
1
a
b c
0.6 0.4 0.2
0
0
- Cd
+ Cd + NC16
+ Cd
Chloroplast
- Cd + NC16
1 μm
500 nm
500 nm
500 nm
1 μm
1 μm
500 nm
Chloroplast
Grana stacking
1 μm
1 μm
Grana lamella
Bundle sheath
Mesophyll cell
(c)
(b)
Fv/Fm
Chlorophyll content (mg g-1 FW)
(a)
500 nm
1 μm
500 nm
1 μm
1 μm
500 nm
ACS Paragon Plus Environment
500 nm
Journal of Agricultural and Food Chemistry
Fig. 4
Page 38 of 43
(a)
Comparative transcriptome analyses
+ NC16
- NC16
Groups
+/- Cd
(c)
Number of DEGs
Up Down
1500 1000
I
+Cd vs -Cd
II
+NC16-Cd vs -Cd
III
+NC16+Cd vs +Cd
+ NC16 +/- Cd
(b) 2000
Comparision
1729
1473
1699
1527
+Cd vs -Cd Up
+NC16-Cd vs -Cd Up
+Cd vs -Cd Down
+NC16-Cd vs -Cd Down
+NC16+Cd vs +Cd Up +NC16+Cd vs +Cd Down 695
544
500
418 630 0
0 1
779
752
132 31
2
3
4
5
6
0
0 0
675
146 191 2 0 0 0 0 143 0 0 0 46 18 68
38112 2 0 0 0 0 11 0 0
0 0
0
0 0 1 0
0
0 0 0
0 0
0 0
4 0 0
0 0 0
0
21 0 643
1
0
0
(d)
ID
Annota�on
+Cd vs –Cd
-Cd+NC16 vs –Cd +Cd+NC16 vs +Cd
[Log2(Fold change)] [Log2(Fold change)] [Log2(Fold change)]
Zm00001d004007 Fer-like Fe deficiency-induced transcrip�on factor
1.0
-1.2
-1.5
Zm00001d017429 Fe-phytosiderophore transporter yellow stripe 1
1.4
-2.0
-2.0
Zm00001d019228 ZIP zinc/iron transport family protein
1.5
-2.3
-3.1
Zm00001d028887 Nico�anamine synthase 2
3.0
-2.2
-3.1
ACS Paragon Plus Environment
Page 39 of 43
Journal of Agricultural and Food Chemistry
Fig. 5
(b)
2500
-NC16 +NC16
2000
- Cd
1000
a
c
d
c
d
b
0
+ Cd 1 week
Relative expression level of ZmYS1
(c)
5 weeks (d)
8
a
10
6 b
4 2
b c
d
0 0h
12 h
24 h
12 h
- NC16
a
8 6
b
4 2
c
0
d
24 h
+ NC16
(e)
(f) 1500 900 600 300 0
100
a
1200 c
b c
Shoot Fe content (mg kg -1 DW)
Root Fe content (mg kg -1 DW)
+ NC16
b
1500
500
- NC16
a
DMA release (μM g -1 DW d -1)
Cd content (μg g-1 DW)
(a)
80
a
a b
60 40 20 0
ACS Paragon Plus Environment
c
Journal of Agricultural and Food Chemistry
Fig. 6
400
a
300 200 100
b c
c
a
500 400
b
300 200 100
d
c
0
0
(c)
(d) 50
a
40 30
b
20 10 0
c d
PA (% of
Radioactivity (%)
Root ABA content (ng g -1 DW)
(b)
3H-ABA)
Shoot ABA content (ng g -1 DW)
(a)
Page 40 of 43
100 80 60 40 20 0
ACS Paragon Plus Environment
a
b
c d
Page 41 of 43
Journal of Agricultural and Food Chemistry
Fig. 7
Wild-type plants +NC16 ( ZIP -ox)
+ABA
+NC16
(d)
Dry weight (mg plant -1)
(c)
1.2 a
1 0.8
+NC16(ZIP-ox)
a
+ABA +NC16
c
+NC16+FLU
d
0.6
0.4 0.2
c
a
b
c
0 Shoots
(e) 0.12 Stomatal aperture (width/length)
(b)
+NC16+FLU
Cd content (μg g-1 DW)
(a)
3000 2000 1000
f gg
e
a
c d
a
a b
b e f f
c
d
0
Roots 1 week
a
a
+NC16(ZIP-ox ) +ABA +NC16 +NC16+FLU
5 weeks
b
0.09
(g)
c
0.06
+Cd
+NC16
+NC16+FLU
28° C
0.03 0
0h
(f) Transpiration rate (mmol m-2 S -1)
1.6
+Cd
+NC16
a a a
1.2
24° C
24 h
b c
0.8
+NC16+FLU
d
c
d e
0.4 48 h
0 0h
24 h
48 h
ACS Paragon Plus Environment
Fig. 8
Journal of Agricultural and Food Chemistry
Page 42 of 43
Reduction Transpira�on rate
Stomatal aperture
ABA ABA metabolism Microbes
Cd stress
Fe2+ PS-Fe3+
ZmYS1
Cd2+ ZmZIP
Fe3+
ACS Paragon Plus Environment
Increase
Page 43 of 43
Journal of Agricultural and Food Chemistry
For Table of Contents Only
Cd
ABA Transpiration rate
Cd
ABA Cd
Cd
Protoplast ABA metabolism Cd
?
ABA Cd
Cd
Cd
ZmZIP
Cd
ABA
ABA
Cd
mRNA Membrane
Cd Cd
Cd
Cd-tolerant bacteria
ACS Paragon Plus Environment
Cd
Apoplast