Functional Toxicogenomic Assessment of Triclosan in Human HepG2

Jul 26, 2016 - The objectives of this study were (1) to identify the functional genomic profile of TCS in human hepatic HepG2 cells and (2) to evaluat...
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Functional Toxicogenomic Assessment of Triclosan in Human HepG2 Cells Using Genome-wide CRISPR-Cas9 Screen Pu Xia, Xiaowei Zhang, Yuwei Xie, Miao Guan, Daniel L. Villeneuve, and Hongxia Yu Environ. Sci. Technol., Just Accepted Manuscript • DOI: 10.1021/acs.est.6b02328 • Publication Date (Web): 26 Jul 2016 Downloaded from http://pubs.acs.org on July 28, 2016

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Environmental Science & Technology

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Functional Toxicogenomic Assessment of Triclosan in Human HepG2 Cells Using Genome-wide CRISPR-Cas9 Screen

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Pu Xia†, Xiaowei Zhang†*, Yuwei Xie†, Miao Guan†, Daniel L. Villeneuve ‡,

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Hongxia Yu†

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State Key Laboratory of Pollution Control & Resource Reuse, School of the

Environment, Nanjing University, Nanjing, 210023, People's Republic of China



United States Environmental Protection Agency, Mid-Continent Ecology Division,

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Duluth, MN 55804, USA.

*Correspondence:

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Xiaowei Zhang, PhD, Prof

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School of the Environment

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Nanjing University

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Nanjing, Jiangsu, 210089, China;

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Tel.: 86-25-89680623

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Fax: 86-25-89680623

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E-mail: [email protected], [email protected]

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ACS Paragon Plus Environment

Environmental Science & Technology

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KEYWORDS: CRISPR-Cas9 functional genomic screening, FTO, MAP2K3,

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obesity, breast cancer

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ABSTRACT

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There are thousands of chemicals in use by humans and detected in the environment

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for which limited or no toxicological data are available. Rapid and cost-effective

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approaches for assessing the toxicological properties of chemicals are needed. We

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used CRISPR-Cas9 functional genomic screening to identify potential molecular

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mechanism of a widely used antimicrobial triclosan (TCS) in HepG2 cells. Resistant

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genes at IC50 (concentration causing 50% reduction in cell viability) were

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significantly enriched in the adherens junction pathway, MAPK signaling pathway

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and PPAR signaling pathway, suggesting a potential role in the molecular mechanism

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of TCS induced cytotoxicity. Evaluation of top-ranked resistant genes, FTO (encoding

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an mRNA demethylase) and MAP2K3 (a MAP kinase kinase family gene), revealed

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that their loss conferred resistance to TCS. In contrast, sensitive genes at IC10 and

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IC20 were specifically enriched in pathways involved with immune responses, which

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was concordant with transcriptomic profiling of TCS at concentrations