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Methods for Determining Cell Wall Bound-Phenolics in Maize Stem Tissues Rogelio Santiago, Ana Lopez-Malvar, Carlos Souto, and Jaime Barros-Rios J. Agric. Food Chem., Just Accepted Manuscript • DOI: 10.1021/acs.jafc.7b05752 • Publication Date (Web): 16 Jan 2018 Downloaded from http://pubs.acs.org on January 16, 2018
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Journal of Agricultural and Food Chemistry
Journal of Agricultural and Food Chemistry
Methods for Determining Cell Wall Bound-Phenolics in Maize Stem Tissues
Rogelio Santiago1*, Ana López-Malvar1, Carlos Souto2, Jaime Barros-Ríos3*
1
Universidad de Vigo, Dpto. Biología Vegetal y Ciencias del Suelo. Unidad Asociada BVE1-
UVIGO y Misión Biológica de Galicia (CSIC). Campus As Lagoas Marcosende. 36310, Vigo, Spain.
2
E.E. Forestales, Dpto. Ingeniería Recursos Naturales y Medio Ambiente, Pontevedra 36005,
Spain.
3
BioDiscovery Institute, University of North Texas, Denton, TX 76203, USA.
* Corresponding authors: Rogelio Santiago, (Tel: +34-986-854800; Fax: +34-986-841362; E-mail:
[email protected]) Jaime Barros-Ríos, (Tel: 940-205-7636; Fax: 940-565-3821; E-mail:
[email protected]) Santiago et al. Page 1
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ABSTRACT
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We compared two methods with different sample pretreatment, hydrolysis, and separation
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procedures to extract cell wall-bound phenolics. The samples were pith and rind tissues from
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six maize inbred lines reportedly containing different levels of cell wall-bound phenolics. In
5
method 1, pretreated samples were extracted with a C18 solid-phase extraction cartridge, and it
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took 6 days to complete. In method 2, phenolics were extracted from crude samples with ethyl
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acetate, it took 2 days to complete and the cost per sample was reduced more than 60%. Both
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methods extracted more 4-coumarate than ferulate. Overall, method 1 yielded more 4-
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coumarate while method 2 yielded more ferulate. The lack of a genotype × method interaction
10
and significant correlations between the results obtained using the two methods indicate that
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both methods are reliable for use in large-scale plant breeding programs. Method 2, scaled, is
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proposed for general plant biology research.
13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30
KEYWORDS: Zea mays, hydroxycinnamic acids, extraction, p-coumaric acid, ferulic acid Santiago et al. Page 2
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INTRODUCTION
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Ferulate (FA) and 4-coumarate (4CA) are hydroxycinnamic acids (HCAs) that are major
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structural components of grass cell walls.1 Ferulate is deposited in both primary and
34
secondary walls, and is linked to arabinoxylans by ester bonds through its carboxylic acid
35
group with the C5-hydroxyl of α-L-arabinosyl side chains of xylans.2 During grass cell wall
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lignification, glucuronoarabinoxylans (the major hemicellulosic polysaccharides in grasses)
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are cross-linked by FA monomers into a complex array of dimers and trimers, and via ether
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bonds to lignin.3,4 Overall, FA plays a significant role in cell wall development and affects
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polysaccharide utilization in grasses. 4-Coumarate is mainly esterified to the γ–position of
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phenylpropanoid sidechains of the syringyl (S)-rich units of lignin.5 Only small quantities of
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4CA are esterified to glucuronoarabinoxylans in immature tissues. Most 4CA accretion occurs
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alongside lignification, making 4CA a convenient indicator of lignin deposition.
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Commelinid monocots and some dicots in the order Caryophyllales have significant
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amounts of HCAs deposited in their cell walls,6 which are considered important natural
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defense compounds against pests and diseases in plants,4,7. Industrially, HCAs are major
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factors limiting forage grass digestibility, and therefore, animal productivity,8 and are
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responsible for the recalcitrance of grass lignocellulose to enzymatic hydrolysis.9 They are
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also potential antimicrobial molecules10 and important bioactive substances in the food
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industry.11 These multiple applications require fast, reliable, and cost-effective methods to
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extract and quantify cell wall bound phenolics from different plant tissues.
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Currently, two main methods are used to analyze wall-bound phenolics in plant tissues 12
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(Table 1). Method 1 was developed by Jung and Shalita-Jones
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Dietary Fiber Method devised by Theander and Aman.13 This method determines the
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composition of the cell wall and includes an in vitro fermentation step to assess forage
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digestibility (Supporting Information, A). More recent approaches, with a special focus on
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HCAs quantification, use simpler liquid–liquid extractions with organic solvents such as ethyl Santiago et al. Page 3
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acetate. These recent methods vary in the amounts of starting material, sample pretreatments,
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and alkaline hydrolysis conditions for extraction, and the separation and chromatographic
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techniques used for quantification.14-16
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In this study, we compared two methods using the same array of samples to provide a
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detailed description of the techniques, to determine the consistency between their results, and
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to assess their suitability for specific research purposes.
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MATERIALS AND METHODS
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Plant materials and experimental design. Six maize inbred lines reported to have different
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cell wall-bound phenolics levels were grown in two geographical locations in Spain in 2012.14
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Pontevedra (42° 30′ N, 8°46′ W) is a coastal location, approximately at sea level, whereas
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Zaragoza (41° 44′ N, 0° 47′ W) is inland at 250 m above sea level. The experimental design
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was a randomized complete block design with three replicates. Each plot had two rows spaced
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0.80 m apart, and each row consisted of 25 two-kernel hills spaced 0.21 m apart. After
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thinning to one plant per hill, the plant density was approximately 60,000 plants per hectare.
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Irrigation, crop management, fertilization, and weed control were carried out according to
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local practices.
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Samples were collected at 30 days after female flowering. The third internode above
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ground level was harvested from five to eight plants. Pith samples were obtained by manually
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removing the rind tissues. Pith and rind tissue samples were frozen, lyophilized, and ground
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through a 0.75 mm screen using a rotating-blade Wiley mill (Arthur H. Thomas, Philadelphia,
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PA, USA).
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Extraction of esterified cell wall-bound phenolics. In method 1, samples were first
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pretreated to obtain a starch-free cell wall residue according to the Uppsala dietary fiber
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method.17 Acetate buffer (5 mL, 0.1 M, pH 5.0) and 0.1 mL heat-stable α-amylase at 10-50
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mg/mL biuret concentration (Sigma Chemical Co., St. Louis, MO, USA) were added to 100
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mg sample and heated at 90 °C for 60 min. After cooling the mixture to 50 °C, 0.2 mL
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amyloglucosidase (Sigma) was added and the resultant mixture was heated for 3 h at 60 °C.
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Sufficient 95% ethanol was added to achieve a final concentration of 80% ethanol and the
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sample was kept at 4 °C overnight. The crude cell wall preparation was recovered by
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centrifugation at 1000 g for 15 min, washed twice with 5 mL of 80% ethanol and once with 5
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mL of acetone, and allowed to air dry under a hood. Subsequently, ester-linked FA and 4CA Santiago et al. Page 5
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were extracted from the starch-free cell wall residue with 10 mL of 2 M NaOH at 39 °C for
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24 h. The alkaline extracts were acidified to pH 1.5–1.6 with concentrated phosphoric acid.
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The acidified extract was filtered through a Whatman filter (0.45 µm pore size) and loaded
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onto a C18 solid-phase extraction column (Supelco Inc., Bellefonte, PA, USA). The column
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was washed with 2 mL of 2M NaOH acidified to pH 1.5 with phosphoric acid, and the HCAs
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were eluted with two 2.5-mL of 50% methanol washes. The eluted samples were brought to a
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final volume of 10 mL and stored at −20 °C until analysis.
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In method 2, 1 g dried ground tissue was pretreated with 30 mL 80% methanol and
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mixed with a Polytron mixer (Brinkman Instruments, Westbury, NY, USA). Samples were
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incubated for 1 h and centrifuged for 10 min at 1000 g. The supernatant containing soluble
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phenolics was discarded; the remaining pellet containing the cell wall-bound material was
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incubated for 4 h with 20 mL 2 N NaOH under nitrogen atmosphere in the dark with shaking
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at 130 rpm at room temperature. After centrifugation at 1000 g for 10 min, the supernatant
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was collected and the pellet was washed twice with 10 mL distilled water. Then, 6 N HCl was
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added to lower the pH to 2.0. Supernatants were pooled and extracted twice with ethyl acetate
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(40 mL each). The collected organic fractions were combined and reduced to dryness using a
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Speed Vac (Savant Instruments, Holbrook, NY, USA) for 3–4 h. The final extract was
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dissolved in 1.5 mL high-performance liquid chromatography (HPLC) grade methanol,
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filtered through a 0.45-µm syringe filter (Chromatographic Specialties, Brockville, ON,
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USA), and stored at −20 °C until HPLC analysis. The detailed lab protocols for both methods
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and a budget estimate by protocol are provided as Supporting Information. Results obtained
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by both methods were adjusted to a dry matter basis for data presentation and comparison.
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HPLC-analysis of esterified cell wall-bound phenolics. The extracts obtained using the two
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methods were quantified by reverse-phase HPLC, comprising a C18 stationary-phase column
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coupled with a diode array detector as previously described.18 Analyses were performed using Santiago et al. Page 6
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a 2690 Waters separation module (Waters, Milford, MA, USA) equipped with a 996
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photodiode array detector (Waters) with a narrow bore column (100 × 2 mm i.d.; 3 µM
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particle size) of YMC ODS-AM (Waters), which is a high carbon load C18 packing material.
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The solvent system consisted of acetonitrile (A) and trifluoroacetic acid (0.05%) in water (pH
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3.4) (B) at a flow rate of 0.3 mL/min. The elution conditions were as follows: initial
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conditions 10:90 (A:B), changing to 30:70 in 3.5 min, 32:68 in 6.5 min, 100:0 in 4 min, then
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isocratic elution with 100:0 for 4.5 min, and finally returning to initial conditions in 3 min.
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The sample injection volume was 4 µL, and the elution profiles were obtained by monitoring
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UV absorbance at 325 nm. Retention times were compared with those of 4CA and FA
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(Sigma) in freshly prepared standard solutions. In method 2, FA dimers were identified by
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comparison with the retention time and UV spectra of the 5–5-diferulic acid standard, and
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confirmed according to previous literature.19 Calibration curves for the standards were built
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and used for external quantitation.
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Statistical analyses. Combined analyses of variance (ANOVA) for the HCAs concentration
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were computed with the PROC MIXED procedure of SAS.20 Location, genotype, and
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replication were considered to be random because they were representative of the variability
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in climate and genetic materials. Comparisons of means among methods were made by
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Fisher’s protected least significant difference (LSD) method.21 Correlations were computed
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using the whole dataset (N = 36; 2 locations × 3 replications × 6 genotypes). The significance
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of the correlations was computed using the PROC CORR and PROC REG procedures of
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SAS.20
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RESULTS AND DISCUSSION
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The main differences between method 1 and 2 are highlighted in Table 1 (See Supporting
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Information for details). Method 1 was proposed by Jung and Shalita-Jones12 to complete the
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Uppsala Dietary Fiber Method by Theander and Aman13. In this method, cell wall residues are Santiago et al. Page 7
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used subsequently for additional analysis and characterization of dietary fibers (i.e.
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determination of Klason lignin and non-starchy polysaccharides for ruminant feed evaluation)
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(Supporting Information, A). Method 2, instead, was specifically used to evaluate plant cell
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wall bound phenolics in seed flours.22 The pretreatment carried out in method 1 took 3 days
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and cost US $2.68 per sample, while the extraction steps took an additional 3 days and cost
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US $5.28 per sample. However, the sample preparation and extraction method performed in
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method 2 took 2 days and cost US $2.88 per sample. This latter method is faster and cheaper,
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but it would be less useful if a further characterization of the cell wall properties is required.
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Even when the cell wall residue preparation is not taken into consideration, method 2 is still
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cheaper than method 1, mainly because of the use of the C18 SPE cartridges in the last one.
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Although both methods produced samples that showed good peak resolution for both
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wall-bound 4CA and FA in the HPLC analysis, the samples prepared using method 2 allowed
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the quantification of FA dimers (diferulates) (Figure 1A). The concentration of these
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compounds in the pith tissues make up about 6% of total ferulates ester linked to the cell wall,
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but less than 1% in the rind tissues, probably because of higher degree of lignification and
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presence of ether linkages not extracted with a mild saponification. Those results are
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consistent with previously published data.23 Diferulates function as cross-linking molecules
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between cell wall polymers.9 These compounds affect numerous cell wall properties such as
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digestibility, accessibility, and extensibility, and confer resistance to pest and diseases.4
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Diferulates are also potentially valuable chemicals as natural antifungal agents.10 Method 2
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has already been used in large-scale maize breeding programs aiming to increase the levels of
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these plant metabolites.24 Other simpler methods, without sample pretreatment, have also
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been used to screen maize mutants for HCAs.25 If diferulates were the target molecules,
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method 1 could be potentially improved by: i) increasing the amount of starting material used
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for analysis, ii) concentrating the volume of the eluted samples, or iii) using higher
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concentration of methanol during the elution step from the SPE cartridges. Further Santiago et al. Page 8
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experiments would be required to identify the actual reason of this limitation.
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The concentration of 4CA was higher than that of FA in both tissues and using both
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methods (Figure 1B). Similar results have been reported for several other plant species.26-28
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Interestingly, the 4CA concentration was higher in the rind than in the pith, while the FA
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levels were similar in both tissues. This reflected greater deposition of lignin in the rind
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tissues,27 and suggested that the accumulation of cell wall-bound FA is independent of the
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levels of 4CA and the degree of lignin polymerization in the cell wall. Extensive work has led
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over recent years to identify cell wall-bound phenolics.29 This literature underlines the
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variation observed among different plant species and tissues analyzed. In maize, for example,
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cell wall-bound FA content can vary from 6.3 mg/g of dry weight in the whole stems to 1.1
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mg/g in the roots.
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The ANOVA revealed significant differences between the two methods for 4CA in the
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pith and FA in the rind (Table 2). These differences cannot be explained by the physiology or
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architecture of the tissues as the same trend was observed in both tissues (Figure 1B). Overall,
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method 1 yielded more 4CA, while method 2 yielded more FA. The inherent characteristics of
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the analytical methods may explain these differences. The single methanol wash in the sample
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pretreatment in method 2 may have been insufficient to remove all soluble phenolics from the
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alcohol-insoluble residue. This should have affected both 4CA and FA, but it may have had a
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stronger effect on the extraction of 4CA than on FA, because the soluble 4CA level was much
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higher than the soluble FA level in these tissues.30 This observation suggests that other steps
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in the analytical procedure were responsible for the differences described above. Samples can
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be saponified by treatment with sodium hydroxide at various concentrations with different
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reaction times and temperatures.29 Cell wall HCAs ester-linked to wall polymers can be
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extracted from the samples by a dilute alkali at room temperature.31 A previous study found
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that increasing the alkaline hydrolysis temperature from 18 °C to 30 °C released 15% more
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4CA but only 9% more FA from mature maize stems,32 indicating that the incubation Santiago et al. Page 9
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temperature during the alkaline treatment has a stronger effect on the release of wall-bound
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4CA than on the release of FA. Another factor to consider is the differential recovery of 4CA
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and FA from the SPE columns. Method 1 used a C18 cartridge; this type of cartridge has been
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widely used in phenolic compound separation, although it shows low recovery for particular
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phenols.33 However, differences in the recovery of low molecular weight polar compounds
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(4CA and FA) from a C18 cartridge was not noted in a more recent study.34
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A non-cross over significant location × method interaction was found for 4CA levels
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in the rind tissues (Table 2). For the sample from Pontevedra, the 4CA level was 10,1 mg/g as
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determined by method 1 and 17,4 mg/g as determined by method 2. For the sample from
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Zaragoza, the 4CA level was 13,1 mg/g as determined by method 1 and 12,8 mg/g as
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determined by method 2. This interaction was attributed to the high variation in 4CA levels in
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the rind when extracted using both methodologies (Figures 1B and 2). Consistent with these
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results, the standard deviations among genotypes were moderate for FA in both tissues and
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methods, but much higher for 4CA, especially in the rind samples (Figure 2). These variations
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explain why the genotypes showed no significant differences in 4CA levels, and clarify the
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origin of the location × genotype × method interaction (Table 2). These variations can be
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explained by the intrinsic properties of the rind cell walls. The outer rind tissue used for these
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analyses was highly heterogeneous, as it included the epidermis, parenchyma, sclerenchyma,
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xylem vessels, and phloem cells, while the inner pith comprised mainly parenchyma cells and
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randomly distributed vascular bundles. Different levels of lignin deposited in the rind during
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the plant response to biotic or abiotic stress factors in the field could lead to different levels of
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wall-bound 4CA, even within replicates from the same field. Our results suggest that the
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variations are due to the nature of the sample rather than the methods used, although further
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studies are required to confirm this. To better understand these variations, it may be useful to
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apply the DFRC (derivatization followed by reductive cleavage) method, which quantifies
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4CA specifically bound to lignin by cleaving lignin ethers while retaining esters.35 Santiago et al. Page 10
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Importantly, no genotype × method interaction was detected (Table 2). Thus, the
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genotypes showed a similar ranking in terms of the levels of wall-bound phenolics in both
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tissues measured by both methods. This result suggested that method 2, which is faster and
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cheaper than method 1, could be used to analyze large numbers of samples. The wide genetic
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variation in FA content indicates that there is potential to breed or genetically engineer plants
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that produce high levels of these phenolic compounds in different plant tissues.24,25
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When the whole data set was analyzed, there was a significant positive correlation
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between the two methods (N = 36, Figure 3). As expected, the r-squared values were slightly
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higher for the pith (r2 = 0.7) than for the rind (r2 = 0.6). The strength of the correlation
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between the two methods could be improved by using multiple methanol washes or preparing
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a protein-free cell wall fraction, which might be suitable when using smaller solvent
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volumes.36 In fact, method 2 has been scaled down for analyses with reduced amount of
231
samples in several recent studies (see Supporting Information, E).15,16,37,38 Overall, these
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results indicate that the two methods are comparable in their ability to quantify wall-bound
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HCAs in different maize stem tissues.
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In summary, methods 1 and 2 can be used to analyze esterified phenolics in maize
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stem tissues, and produce reliable and reproducible results. Method 1 is recommended for
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analyzing forage digestibility when samples are processed as part of a full cell wall
237
characterization. Method 2 is faster and cheaper than method 1, and is appropriate for
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analyzing cell wall FAs (both monomers and dimers). Method 2 requires larger samples,
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which can be a limitation in some research applications. For these reasons, method 2, scaled,
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is more appropriate for diverse research purposes in plant biology.
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ACKNOWLEDGMENTS
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We thank Dr. Lana Reid of ECORC, Agriculture and Agri-Food Canada for supplying inbred
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line CO441 used in this study. We acknowledge Rosa Ana Malvar and Hans Joachim G. Jung
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for critical reading of the manuscript.
245 246
SUPPORTING INFORMATION DESCRIPTION
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Supporting Information : A: Simplified diagram of the Uppsala Dietary Fiber Method by
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Theander and Aman (1980) completed with the analysis of cell wall-bound phenolics
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proposed by Jung and Shalita-Jones (1990), highlighting the steps tested in the current study:
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(a) cell wall residue preparation, and (b) ester phenolics extraction. DO/OM, dry
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matter/organic matter; IVTF, in vitro total fermentation; A.I.R. PREP, cell-wall residue
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preparation; DIw, deionized water; CHO, carbohydrates; B: Lab Protocol: Cell-wall residue
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preparation; C: Lab Protocol Method 1: 2N Alkaline Extraction with SPE column cleanup; D:
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Lab Protocol Method 2: 2N Alkaline Extraction with Ethyl Acetate separation; E: Lab
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Protocol Method 2-Scaled: 2N Alkaline Extraction with Ethyl Acetate separation; F: Rough
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budget estimates for each lab protocol.
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ACKNOWLEGMENT FOR FUNDING RESOURCES
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This research was supported by the National Plan for Research and Development of Spain
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(AGL2012-33415, AGL2015-67313-C2-1-R, AGL2015-67313-C2-2-R), the Autonomous
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Goverment of Galicia (XUNTA: ED431F 2016/014) and co-financed by the European Social
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Fund (FEDER). R. Santiago acknowledges postdoctoral contract “Ramón y Cajal” financed
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by the Ministry of Economy and Competitiveness (Spain), Vigo University, and the European
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Social Fund. J. Barros acknowledges a grant from the autonomous government of Galicia
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(Spain).
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FIGURE CAPTIONS
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Figure 1. HPLC elution profile of 4-coumarate (A, 1) and ferulate (A, 2) using both analytical
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methods tested in the current study. Panel A shows the HPLC elution profiles at 325nm of
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maize inbred line CM151 extracted from rind tissues. Method 2 showed better resolution for
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ferulate dimers (diferulates) (3). Panel B shows the average concentrations of 4-coumarate
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(4CA) and ferulate (FA) in pith and rind tissues from mature internodes of six field grown
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maize inbred lines estimated using both methodologies.
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Figure 2. Levels of 4-Coumarate (4CA) and Ferulate (FA) in Pith and Rind Tissues from
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Mature Internodes of Six Field Grown Maize Inbred Lines Estimated Using both Analytical
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Methods tested in the Current Study. Capital and Lower Letters show Genotypes Comparison
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by Method 1 and 2 Respectively. The Interaction Genotype x Method was not significant.
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Figure 3. Scatter plot for concentrations of ferulate (FA, A) and 4-coumarate (4CA, B) in
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µg/g of dry weight measured using the two analytical methods tested. The black-dashed line
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shows how far methods differ from a one-to-one correspondence. An asterisk (*) denotes
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significance at P