Recombinant Tyrosinase from Polyporus arcularius - ACS Publications

Mar 10, 2016 - in Escherichia coli, Characterization, and Use in a Study of Aurones as. Tyrosinase Effectors. Eva Marková,. †,‡. Michael Kotik,. ...
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Recombinant Tyrosinase from Polyporus arcularius: Overproduction in Escherichia coli, Characterization and Use in a Study of Aurones as Tyrosinase Effectors Eva Marková, Michael Kotik, Alena Krenkova, Petr Man, Romain Haudecoeur, Ahcene Boumendjel, Renaud Hardre, Yasmina Mekmouche, Elise Courvoisier-Dezord, Marius Réglier, and Ludmila Martinkova J. Agric. Food Chem., Just Accepted Manuscript • DOI: 10.1021/acs.jafc.6b00286 • Publication Date (Web): 10 Mar 2016 Downloaded from http://pubs.acs.org on March 16, 2016

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Recombinant Tyrosinase from Polyporus arcularius: Overproduction in

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Escherichia coli, Characterization and Use in a Study of Aurones as

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Tyrosinase Effectors

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Eva Marková†,‡, Michael Kotik†, Alena Křenková†, Petr Man†, Romain Haudecoeur&, Ahcène

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Boumendjel&, Renaud Hardré#, Yasmina Mekmouche#, Elise Courvoisier-Dezord#, Marius

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Réglier#, Ludmila Martínková†*

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Czech Republic

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Institute of Microbiology, Czech Academy of Sciences, Vídeňská 1083, 142 20 Prague,

Department of Biochemistry and Microbiology, Faculty of Food and Biochemical

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Technology, University of Chemistry and Technology Prague, Technická 3, 166 28 Prague,

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Czech Republic

12

&

13

#

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France

Université Grenoble Alpes, CNRS, DPM UMR 5063, 38041, Grenoble, France

Aix Marseille Université, Centrale Marseille, CNRS, ISm2 UMR 7313, 13397, Marseille,

15 16

*Corresponding

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[email protected]

author.

Phone:

420-29644-2569.

Fax:

420-29644-2509.

E-mail:

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Abstract: Tyrosinases act in development of organoleptic properties of tea, raisins etc., but

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also cause unwanted browning of fruits, vegetables and mushrooms. The tyrosinase from

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Agaricus bisporus has been used as a model to study tyrosinase inhibitors which are also

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indispensable in the treatment of skin pigmentation disorders. However, this model has

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disadvantages such as side enzyme activities and presence of multiple isoenzymes. Therefore,

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we aimed to introduce a new tyrosinase model. The pro-tyrosinase from Polyporus arcularius

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was overproduced in Escherichia coli. Trypsin digestion led to a cleavage after R388 and

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hence enzyme activation. The tyrosinase was a homodimer and transformed L-DOPA and

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tert-butylcatechol preferentially. Various aurons were examined as effectors of this enzyme.

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2’- and 3’-Hydroxyaurones acted as its activators and 2’,4’-dihydroxyaurone as an inhibitor,

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while 4’-hydroxyaurones were its substrates. The enzyme is a promising model for tyrosinase

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effector studies, being a single isoenzyme and void of side enzyme activities.

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Keywords: tyrosinase, Polyporus arcularius, Escherichia coli, trypsin digestion, aurones

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INTRODUCTION

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Tyrosinases (EC 1.14.18.1) are dinuclear copper oxidases acting on phenolic compounds.

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They catalyze the monooxygenation of monophenols, which is referred to as phenolase or

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monooxygenase activity, and the oxidation of 1,2-diphenols (catechols), which is catecholase

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or oxidase activity.1 Tyrosinases attract much attention because of their roles in skin

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pigmentation and pigmentation disorders in mammals and in browning of some agricultural

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products. The latter processes are desirable in fermented tea, cocoa or raisins, but unwanted in

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some fruits, vegetables and mushrooms, where they occur during senescence or their

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inappropriate handling after harvest.2 Thus a number of studies focused on tyrosinase

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inhibitors as antibrowning agents for food industry and as drugs and cosmetics additives for

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the treatment of hyperpigmentation.2-4 Tyrosinase applications in biodegradation,5-8

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biotransformation,9,10 biopolymer grafting and cross-linking11-15 and in biosensors16-17 were

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also examined. The uses of fungal and bacterial tyrosinases in these areas were reviewed

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previously.18-20

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The tyrosinase from Agaricus bisporus (common button mushroom) is readily available at

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a low cost and has been thus used in the majority of the aforementioned studies. However, the

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testing of potential tyrosinase inhibitors and antibrowning agents is not fully reliable with this

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model, as it may contain several isoenzymes in differing ratios and various contaminants

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(glycosidases, laccases, peroxidases, lectins, phenolic compounds).20 For this purpose,

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recombinant fungal tyrosinases containing single isoenzymes and void of these contaminants

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will therefore be more promising.

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Plenty of putative tyrosinases and tyrosinase-like enzymes are encoded in fungal

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genomes21 but few of them were studied at the protein level.21-24 Effective heterologous

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expression systems are necessary to exploit this resource. One option is the production of the

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latent tyrosinase form, its purification and its subsequent activation. Possible toxic effects of

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the active enzyme on the host, as well as browning or protein precipitation during the enzyme

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purification can be thus avoided.25 In this way, the tyrosinases from Aspergillus oryzae and

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Pholiota microspora (previously named Pholiota nameko) were produced in E. coli,26,27 but

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the activity yields were not reported.

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The aim of this work was to introduce a new model of a eukaryotic tyrosinase for

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tyrosinase effector studies. To this end, the tyrosinase from the edible mushroom Polyporus

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arcularius was selected. The corresponding gene and its light-regulated expression was

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characterized in the fungus,28 but the properties of the protein product were unknown. Here

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the protein was overproduced in E. coli, characterized and used to study the effects of natural

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flavonoid aurones (benzylidenebenzofuran-3(2H)-one) and their derivatives on the tyrosinase

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activity. Their effects were also previously tested with the tyrosinases from A. bisporus and

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Streptomyces antibioticus. In those studies, some of them proved to be powerful tyrosinase

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inhibitors, but others were tyrosinase activators or substrates, depending on their

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hydroxylation pattern.29,30 Here, the previously described effects of aurones were compared

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with those on the new tyrosinase from P. arcularius.

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MATERIALS AND METHODS Chemicals. Aurones (Figure 1) were prepared as described previously.29,30 Other chemicals were purchased from standard sources.

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Sequence analyses and DNA manipulations. Database searches and sequence

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alignments were made using the programs BLAST (http://blast.ncbi.nlm.nih.gov/Blast.cgi)

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and Clustal W2 (http://www.ebi.ac.uk/Tools/msa/clustalw2/), respectively. The synthetic gene

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coding the pro-tyrosinase from P. arcularius HHB13444 (UniProt accession no. Q65Z70)

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was designed in two parts without codon optimization, and purchased from Generay Biotech

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Co. (Shanghai, China) and GenScript USA Inc., respectively, as pET28a-based constructs.

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The major N-terminal part of the gene encoding a 429-residue protein with an N-terminal His-

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tag (1179 bp, its Kpn I restriction site eliminated) was obtained in pET28a under the control

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of the T7 promoter (termed pET28ParcN). The C-terminal domain-encoding part of the gene

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(702 bp) was received on a separate plasmid (pParcC) and was PCR-amplified using a

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PfuUltra II Fusion HS DNA polymerase (Agilent Technologies), the primers ParcC-F (5′-

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CCACTTGCCGTCAATCTGGCAAGCG-3′)

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GATGGTACCCTACTAGGTAACCTGAAGGGAAGCAACGTG-3′, the Kpn I restriction

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site being underlined), and pParcC as a template. Linearization of pET28ParcN was

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accomplished by PCR using a Phusion DNA polymerase (Thermo Scientific), and the primers

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ParcVec-F

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ParcVec-R

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G-3′, the Kpn I restriction site being underlined). The PCR products were gel-purified, 5′-

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phosphorylated with T4 polynucleotide kinase (New England BioLabs), and restricted with

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Kpn I. After purification using a High Pure PCR Product purification kit (Roche), the

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restricted PCR products were ligated using a DNA ligation kit (TaKaRa Bio Inc.). The

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ligation mixture was subsequently transformed into E. coli TOP10 cells (Life Technologies).

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Plasmids from eight colonies were isolated, and the correct gene assembly was verified by

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restriction analysis. The correctly assembled pro-tyrosinase-encoding gene in pET28a was

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fully sequenced. The resulting plasmid carrying the gene coding for the pro-tyrosinase from

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P. arcularius was designated pET28ParcP.

and

ParcC-R

(5′-GAACGCGGATCGCGCCCGGGAGCCGCCATAGAACTTG-3′)

(5′-

and

(5′-GTTGGTACCGCGGCCGCACTCGAGCACCACCACCACCACCACTGA

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Gene expression. Competent E. coli BL21(DE3) cells (Life Technologies) were co-

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transformed with plasmid pET28ParcP and pGro7, which is included in the Chaperone

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Plasmid kit from Takara Bio Inc. The cells were grown in 500-mL Erlenmeyer flasks

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containing 100 mL of LB medium supplemented with 0.2 mM CuSO4, kanamycin (50 µg

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mL-1) and chloramphenicol (34 µg mL-1) for 3 h at 37 °C with shaking (220 rpm). Inducers of

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the expression of tyrosinase and GroEL/ES chaperones (0.02 mM isopropyl-β-D-1-

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thiogalactopyranoside (IPTG) and 11.3 mM L-arabinose, respectively) were then added and

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the cultivation temperature reduced to 20 °C. After a further 24-h cultivation, the cells were

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harvested by centrifugation (30 min, 4 °C) and stored at -80 °C until use.

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Enzyme extraction and affinity chromatography. The harvested biomass was

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resuspended in binding buffer (20 mM sodium phosphate, 500 mM NaCl, 20 mM imidazole,

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pH 7.4). Lysozyme and DNAse were added to final concentrations of 200 and 20 µg mL-1,

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respectively, and MgCl2 and PMSF to 1 mM each. The resulting slurry was incubated on ice

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for 30 min and then sonicated on ice (Ultrasonic Homogenizer 4710 Series, Cole – Parmer,

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USA; power output at 40%, 15 x 1 min). The crude extract was centrifuged (16,800 g, 20 min,

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4 °C) and analyzed by SDS-PAGE. The supernatant was loaded onto 1-mL HisTrap FF

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column (GE Healthcare). The pro-tyrosinase was eluted (1 mL min-1) with a linear gradient

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(30 min) of 20-500 mM imidazole in 20 mM sodium phosphate, 500 mM NaCl, pH 7.4.

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Fractions containing pro-tyrosinase were identified by SDS-PAGE and pooled.

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Proteolytic digestion. The reaction mixture (total volume 1 mL) contained ca. 1 mg of

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the pro-tyrosinase purified by affinity chromatography, 0.1 mg of trypsin (Sigma) and the

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elution buffer (see above). The reaction proceeded at 25 °C with shaking (Thermomixer

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Eppendorf; 800 rpm) and was terminated after 15 min by adding 2 mM PMSF. Alternatively,

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trypsin was replaced with α-chymotrypsin (0.1 mg; Sigma) and the reaction was carried out

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under the same conditions.

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Size-exclusion chromatography. The molecular mass of the tyrosinase was assessed by

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size-exclusion chromatography using a Superdex 200 10/300 GL column (GE Healthcare)

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with a flow rate of 0.4 mL min-1. The mobile phase was 50 mM Tris/HCl, 150 mM NaCl (pH

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7.2). The calibration proteins were cytochrome c, carbonic anhydrase, albumin, alcohol

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dehydrogenase and β-amylase.

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Spectrophotometric activity assays. Tyrosinase activities for L-tyrosine, L-DOPA, TBC

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and p-cresol were determined according to previously described methods (slightly

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modified).31-33 The reaction mixtures (total volume 1 mL) contained 1 mM substrate, an

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appropriate amount of the protein and 100 mM citrate buffer (pH 5.5). The reactions

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proceeded at 50 °C for up to 10 min without shaking. The reaction products of TBC and p-

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cresol were quantified at 400 nm (ε400 nm = 1,200 M-1 cm-1 and 1,433 M-1 cm-1, respectively)

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and those of L-tyrosine and L-DOPA at 475 nm (ε475 nm = 3,400 M-1 cm-1).21,32,34 The increase

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in absorbance was monitored continuously and the activities were calculated from the linear

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part of the reaction. The pH and temperature optima and temperature stability were

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determined in the same way using L-DOPA as the substrate. Enzyme kinetics were

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determined in microtitration plates (reaction volume 0.2 mL) at pH 6.0 (phosphate buffer) and

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30 °C using 0.02 – 2 mM of L-DOPA. The same method was used to determine the effects of

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aurones (0.003 − 0.5 mM) on the enzyme activity for L-DOPA (1 mM) in the presence of 1 %

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(v/v) dimethylsulfoxide. The inhibition of the enzyme by compound 1b was determined with

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15.625-2000 µM - 2 mM of L-DOPA. The activities of the tyrosinase for its aurone substrates

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2b and 3c were determined in the same way but without L-DOPA, and the decrease in

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substrate concentrations was quantified at 400 nm as described previously.30

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Activity assay by HPLC. Tyrosinase activity for phenol was determined in reaction

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mixtures containing 1 mM of the substrate, 100 mM citrate buffer (pH 5.5), and an

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appropriate amount of protein. The reactions proceeded at 50 °C for 2 - 20 min with shaking

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(thermomixer; 800 rpm) and were terminated by adding 0.2 M HCl. After centrifuging the

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samples, the concentration of phenol in the supernatants was determined by HPLC (column

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Chromolith Speedrod RP18 (Merck), mobile phase 20% acetonitrile with 0.1% H3PO4, flow

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rate 2 mL min-1). Activities for o-, and m-cresol were examined in an analogous way.

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Mass spectrometry. The protein was cut out of the SDS polyacrylamide gel, destained

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and reduced (30 mM Tris-(2-carboxyethyl)phosphine, 90°C, 30 min). After alkylation of

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cysteines with 30 mM iodoacetamide for 45 min and digestion with trypsin (Trypsin Gold,

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Promega; 37°C), the peptides thus obtained were analyzed using an ApexQe 9.4T instrument

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with MALDI source (Bruker Daltonics). MMass software (www.mmass.org)35 was used to

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interpret the spectra. Intact monoisotopic mass of the protein was obtained by direct infusion

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to ESI-FT-ICR MS after protein desalting on a protein microtrap (Optimize Technologies).

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Data were processed in DataAnalysis 4.1 (Bruker Daltonics). Alternatively, the protein was

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treated with 30 mM TCEP for 10 min at 75 °C prior to desalting. Fragmentation of the protein

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was done using collision-induced dissociation in the quadrupole. For a detailed sequence

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characterization and localization of modifications, the protein was analyzed using the system

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described elsewhere.36 Briefly, the protein was dissolved in 0.5 M glycine HCl buffer pH 2.3

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containing 4 M urea, and injected into an HPLC system consisting of an immobilized pepsin

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column, reversed-phase trap column and analytical column connected to the ESI source of

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FT-ICR MS. Data were acquired in LC-MS/MS mode and tandem mass spectra were

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searched using the MASCOT algorithm against the sequence of the tyrosinase.

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RESULTS

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Pro-tyrosinase overproduction and partial purification by affinity chromatography.

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The rationale behind designing the pro-tyrosinase gene in two parts (see Materials and

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methods) was to compare the expression of the genes coding the entire pro-tyrosinase on one

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hand, and only its active part (lacking the C-terminal region) on the other. However, no

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activity was detected in the latter option, although a protein with an apparent molecular

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weight of ca. 45 kDa (close to the expected ca. 47 kDa) was produced (Supporting

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information; Figure S1). The codon frequency was not optimized to avoid translation rate

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being too high which may lead to misfolding.37 Expression of the total pro-tyrosinase gene

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also gave a protein of the expected size (ca. 68 kDa). Variations in cultivation temperature

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(15, 20 or 25 °C after induction) and in IPTG and CuSO4 concentrations (both 0.02 mM, 0.2

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mM or 1 mM) were examined to increase the yield of the soluble enzyme further (data not

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shown). Each parameter optimum found was used in subsequent testing. As a result, the

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highest amount of the soluble protein was obtained with 0.02 mM IPTG, 0.2 mM CuSO4, at a

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cultivation temperature of 20 °C. The pro-tyrosinase was partially purified by Ni affinity

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chromatography (Figure 2, lane 3) of the cell extracts to give ca. 54 mg of protein L-1 of the

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culture medium. This protein sample also contained the chaperones, which were produced by

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this expression system and co-purified with the pro-tyrosinase as indicated by SDS-PAGE

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showing a band corresponding in size to the GroEL subunit (ca. 60 kDa; Figure 2, lane 2-3).

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Tyrosinase activation and gel filtration. A subsequent treatment of the partially purified

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pro-tyrosinase by trypsin or α-chymotrypsin gave active tyrosinase. A specific activity ca.

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25% higher was obtained with trypsin (Fig. S2). The trypsin digestion was therefore used in

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the subsequent work. This also led to a marked reduction in the molecular size of the protein

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(from ca. 68 kDa to ca. 43 kDa; Figure 2, lane 4). The enzyme obtained in this way lost its

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ability to bind to the Ni affinity column, suggesting cleavage of the His-tag. At the same time,

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the band of GroEL almost disappeared in the electrophoreogram (Figure 2, lanes 4-5). GroEL

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contains multiple target sites for trypsin and it was thus probably digested into low-molecular-

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weight peptides. The active tyrosinase was separated by size-exclusion chromatography,

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which confirmed that it was the prevailing protein species in this sample. One of the minor

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protein components probably corresponded to trypsin, as judged from its molecular weight of

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ca. 23 kDa (Supporting information; Figure S2). The amount of the protein thus obtained was

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ca. 30 mg of protein L-1 of the culture medium. The activity yield was ca. 3,800 U L-1 of the

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culture medium for L-DOPA as the substrate (9,000 U L-1 for TBC). The molecular mass of

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the active tyrosinase was determined by size-exclusion chromatography to be 79.4 kDa,

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which was in relatively close agreement with the molecular mass of a dimer of two N-

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terminal fragments devoid of their His-tags (~86 kDa).

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Mass spectrum analyses of the purified tyrosinase. Further examination of the protein

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was done by peptide mapping, and revealed that the trypsin-catalyzed cleavage probably

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produced a protein product delimited by sequences GSEFMSH- at the N-terminus and -

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KRYGGSR at the C-terminus. The final product is thus most likely composed of 392 aa

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residues and ends with R388. The recombinant protein probably also contained four aa

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residues from the region following the N-terminal His6-tag, and was thus composed of 392 aa

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residues (Supporting information; Figure S3). The two copper-coordinating sites were

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predicted, which consist of three His-residues each and are conserved among tyrosinases

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(ibid.). The molecular weight calculated for this protein (ca. 43.1 kDa) corresponded to that

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determined by SDS-PAGE (ca. 43 kDa; Figure 2). To further confirm these findings, the

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protein was subjected to intact mass measurement using FT-ICR MS. The measured

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monoisotopic mass of 43090.025 Da was close to the expected calculated value for the active

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tyrosinase (43092.116) but the mass error of 2 Da was too high for FT-MS measurement

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(typically, accuracies in the ppm range are obtained). Since the protein reduction using TCEP

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had no effect, we ruled out the presence of a disulphide bond. In addition, the MS/MS

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analysis of the intact protein verified that the activated recombinant tyrosinase starts with the

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sequence GSEFMSH- and ends with -KFYGGSR and that there are no modifications in the

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71 N-terminal and 70 C-terminal amino acids. Therefore we considered the presence of a Cys-

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His thioether bond, previously described in tyrosinases,38,39 as a possible explanation. Next,

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we attempted to find experimental proof of this hypothesis. The protein was injected into an

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immobilized pepsin column and the resulting peptides separated by a reversed-phase HPLC

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with subsequent MS/MS analysis. Using this approach, we localized the thioether connection

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between C85 and H87 present in the sequence -GYCTHG-.

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Characterization of the purified tyrosinase. The substrate range of the purified

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tyrosinase was determined at a fixed substrate concentration (1 mM). The enzyme accepted

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TBC, L-DOPA, p-cresol, phenol and L-tyrosine as its substrates with the relative activities of

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100%, 42%, 37%, 4% and 1%, respectively; o- and m-cresol were not substrates. The relative

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activities must be evaluated with some caution, the substrate concentrations not being

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optimized. The Km was then determined for L-DOPA and shown to be relatively high (1.04 ±

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0.08 mM). The enzyme exhibited kcat of 223 ± 8 s-1 for this substrate (Table 2; Supporting

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information; Figure S4). The enzyme was active between pH 4 and 9, and exhibited more

241

than 60% of its maximum activity (found at pH 5.5) between pH 5 and 6 (Supporting

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information; Figure S5). The enzyme exhibited its optimum activity at 50 °C, and retained 65

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% of its maximum activity at 70 °C. It was unstable at temperatures over 55 °C (Supporting

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information; Figure S6).

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Effects of aurones on tyrosinase activity. Several aurones, some of which were

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previously shown to differ in their behaviour towards the fungal tyrosinase from A. bisporus

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and the bacterial tyrosinase from Streptomyces antiobioticus,30 were used for testing with the

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tyrosinase from P. arcularius. In the previous study, compound 1b with a 2,4-disubstituted B-

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ring (i.e. with a resorcinol moiety) was found to be a strong inhibitor of both fungal and

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bacterial tyrosinase. Compounds 2a and 3b with a monosubstituted B-ring (substituted in

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ortho- or meta-positions) were inhibitors of the bacterial enzyme, but activators of the fungal

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one. Compounds 2b and 3c containing a para-substituted B-ring were substrates of both

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enzymes, and compounds 1a and 3a with an unsubstituted B-ring did not exhibit any effect on

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the enzymes. Both fungal tyrosinases (from A. bisporus and P. arcularius) exhibited the same

255

type of behaviour towards all the previously tested compounds, but differed in their Km or

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IC50 towards each of their substrates or inhibitors, respectively (Table 1; Supporting

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information; Figures S7-S10). The values of both of these constants were generally higher for

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the tyrosinase from P. arcularius, while those of the bacterial tyrosinase were the lowest

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(except for compound 2b). The inhibition data of compound 1b were analyzed with the

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program EZ-FIT.40 Based on the criteria describing the goodness-of-fit (standard errors,

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Student t test, identifications of outlining data, and Akaike information criterion test), the

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inhibition data best fitted the mixed inhibition model (Ki1 = 7 ± 1 µM, Ki2 = 27 ± 12 µM)

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(Supporting information; Figures S11-12).

264 265

DISCUSSION

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Recombinant tyrosinases from bacteria6,16,41-43, fungi21,23,24,26,27,33,44,45 and humans46,47 were

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previously produced in differing yields and purities. In the fungal tyrosinases, C-terminal

268

proteolytic processing is required for its activity.48 The strategies for the expression of fungal

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tyrosinase genes used either Pichia pastoris23 or some non-standard hosts such as Aspergillus

270

niger,45 Saccharomyces cerevisiae33 or Trichoderma reesei,23 which produced the enzymes in

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their active forms. However, significant yields per 1 L of cell culture were only reported for

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P. pastoris (ca. 24 mg of protein and 1,200 U) and A. niger (ca. 20 mg of protein and 1,668

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U) producing the tyrosinases from T. reesei and P. sanguineus, respectively.24,45

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In this work, a tyrosinase was produced in its latent form in E. coli and activated in vitro.

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Previously, a pro-tyrosinase from P. microspora was produced in this host as a thioredoxin

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fusion protein to improve its solubility,27 but the protein and activity yields have not been

277

reported. In our study, the yield (ca. 30 mg of the activated enzyme and ca. 3,800 U per 1 L of

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the culture medium) was ca. 2-3 fold higher than for the two tyrosinases expressed in A. niger

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or P. pastoris (see above). Thus the new tyrosinase was obtained in sufficient amounts to

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determine its substrate specificity and to use it as a model for testing potential tyrosinase

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effectors.

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The activation process, which removed the active site protection48,49, was studied in both

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wild-type and recombinant producers of tyrosinases (Table S1). In almost all of these

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enzymes, the proteolytic cleavage was found in the linker region between the C- and N-

285

terminal domains (ca. 26-31 aa residues downstream of the conserved Y(F)-X-Y motif21;

286

supplementary Figure S13). For instance, the C-terminal aa residue was identified in the

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crystallized PPO3 and PPO4 tyrosinases from A. bisporus to be G392 and S383,

288

respectively.38,39 The C-terminal aa residue of the purified active tyrosinase in N. crassa was

289

F408.50 The proteolytic cleavage of the fungal pro-tyrosinases also proceeded in their

290

recombinant eukaryotic hosts in the corresponding regions.23,24,44,45 However, the tyrosinase

291

from Trichoderma reesei was cleaved at a different site when produced in Pichia pastoris

292

(R407) compared to the native host (G400).24 This could be one of the reasons for their

293

different pH profiles and slightly different specific activities. E. coli produced the latent forms

294

of tyrosinases, and it was thus necessary to cleave the enzymes in vitro. The enzyme from P.

295

microspora was probably processed after F387 by α-chymotrypsin, i.e. at the same site as the

296

endogenous tyrosinase.27 In the tyrosinase from P. arcularius, the cleavage site was predicted

297

to be F393 on the basis of the sequence alignment with the aforementioned enzymes

298

(Supporting information; Figure S13). The cleavage site in the recombinant enzyme digested

299

by trypsin was R388 and was thus close to the predicted one. The action of trypsin on the

300

evolutionarily distant tyrosinase from A. oryzae was different: the proenzyme was cleaved at

301

two sites (K312 and K457) and the holoenzyme thus consisted of two large and two small

302

subunits containing residues 2-312 and 313-457, respectively.26

303

It was speculated that the C-terminal domain may have similar effects to the chaperone-

304

like bacterial proteins which are probably responsible for copper incorporation into tyrosinase

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305

molecules.27 The notion of its importance for the post-translational processing of the pro-

306

tyrosinase was supported by the observation that the expression of genes coding for mature

307

tyrosinases from P. microspora, A. oryzae and A. bisporus failed to produce active enzymes.

308

26,27,51

309

conclusion.

Our attempts to express the tyrosinase from P. arcularius in this way led to the same

310

Few fungal tyrosinases, which share differing levels of amino acid sequence identities (29

311

- 69 %) with the new tyrosinase from P. arcularius, have been biochemically characterized so

312

far (Table 2). The majority of these enzymes exhibited apparent molecular weights of 42-45

313

kDa in SDS-PAGE. The number of subunits in the holoenzyme was determined in P.

314

sanguineus22 and P. arcularius, and the enzymes were found to be a monomer and a dimer,

315

respectively. However, it cannot be excluded that the dimer is artificially formed due to

316

protein cross-linking.25 The tyrosinase from A. oryzae, which is evolutionarily distant from

317

these enzymes (see above), is a heterotetramer consisting of two 36 kDa and two 18-kDa

318

subunits resulting from the double cleavage of the pro-tyrosinase.26 The endogenous

319

tyrosinases from A. bisporus are also composed of two large and two small subunits, the large

320

subunits being themselves active.25

321

The specific tyrosinase activity for L-DOPA was the highest in P. arcularius, followed by

322

P. sanguineus22, A. bisporus33 and T. resei23-24 (in this order). The Km values for L-DOPA were

323

in a broad range from approximately 1 µM in A. bisporus PPO2 isoenzyme33 or P. sanguineus44

324

to 1.930 mM in P. microspora,31 that of P. arcularius (1.04 mM) being similar to that in P.

325

microspora. The kcat for L-DOPA with the tyrosinase from P. arcularius was ca. half of that

326

with the tyrosinase from P. microspora, but higher than with the other fungal enzymes.

327

Tyrosinases generally exhibit lower activities for L-tyrosine compared to L-DOPA. For instance,

328

in the enzymes from T. reesei23,24 , A. bisporus47and the human tyrosinase47, the former

329

substrate was transformed at reaction rates one to two orders of magnitude lower. The

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330

tyrosinase from P. sanguineus22 and the bacterial tyrosinase from S. antibioticus47 exhibited

331

higher relative activites for L-tyrosine (ca. 25-30%) compared to L-DOPA. In the enzyme from

332

P. arcularius, this relative activity was only ca. 1%, which, however, could be also caused by

333

low substrate concentrations. It must be noted that using high concentrations of this substrate

334

(e.g. 10 mM) is difficult due to its low solubility in water (ca. 2.5 mM).23

335

The typical pH optimum of the enzymes was 6.0-7.0 but the tyrosinase from T. reesei

336

exhibited an optimum of pH 9.0 when expressed in the native organism. In contrast, the pH

337

optimum of the same enzyme produced in P. pastoris was lower (6.0),23,24 possibly due to

338

different proteolytic cleavage in different hosts and/or different glycosylation patterns. The pH

339

optimum of P. arcularius (5.5) was slightly lower than in the aforementioned enzymes.

340

Aurones is a type of flavonoids occurring in numerous plants, where they generate a gold-

341

yellow coloration. The therapeutic potential of these compounds and their synthetic analogues

342

have not yet been fully explored. One of their biological activities is their inhibition effect on

343

the tyrosinase activity in human melanocytes and the lead structure with B-ring hydroxylation

344

at the C-4´ position was identified. The inhibitory effects of such compounds seemed to be

345

much stronger than those of the well-known tyrosinase inhibitors arbutin and kojic acid. In

346

addition, toxicity studies in animals (rats, rabbits) revealed no adverse effects of these

347

aurones.52 The relationships between the substitution patterns and the inhibitory activity of

348

aurones was then also studied with the purified enzymes from A. bisporus, S. antibioticus30

349

and P. arcularius (this work) and the structures were optimized. Thus aurons with the

350

resorcinol moiety were the most powerful inhibitors of all three enzymes. In contrast, some

351

aurone analogues with other substitution patterns exhibited different effects on different

352

tyrosinases. It was previously hypothesized that this may be associated with the holoenzyme’s

353

structure (tetramer in A. bisporus, dimer in S. antibioticus). However, the P. arcularius

354

tyrosinase which probably is also a dimer, behaved in a similar way to the enzyme from A.

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355

bisporus. Thus the reason for the different behaviour of the fungal tyrosinases on one hand,

356

and bacterial on the other, may instead be the difference in the regions surrounding their

357

active sites.

358

In conclusion, a new tyrosinase from P. arcularius was produced at a high yield and its

359

utility as a model for studying tyrosinase inhibitors, activators and substrates was

360

demonstrated. An optimized E. coli expression system was used to produce the enzyme in its

361

latent form, which was then activated by a partial proteolytic cleavage. This strategy ruled out

362

the toxic effects of the active tyrosinase on the host as well as the unwanted manifestation of

363

the tyrosinase activity (potential protein oxidation and aggregation) during purification.

364

Compared to the commercial tyrosinase from A. bisporus, it has the advantage of having a

365

higher specific activity but, primarily, of containing only one isoenzyme and being void of the

366

impurities present in tyrosinases prepared from fungi.

367 368

ABBREVIATIONS USED

369

L-DOPA, 3,4-dihydroxy-L-phenylalanine

370

PMSF, phenylmethanesulfonyl fluoride

371

TBC, tert-butylcatechol

372

TCEP, tris(2-carboxyethyl)phosphine

373 374

ACKNOWLEDGEMENT

375

The Ministry of Education, Youth and Sports of the Czech Republic (project LD12049), the

376

Technology Agency of the Czech Republic (TA04021212), the Institute of Microbiology of

377

the Czech Academy of Sciences (internal project RVO61388971), the Agence Nationale pour

378

la Recherche (Labex Arcane ANR-11-LABX-0003-01 and Blanc program 2Cu-TargMelanin

379

ANR-09-BLAN-0028-01/02/03) and the European COST Program (COST action CM1003

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WG 2), within whose framework this work was carried out, are gratefully acknowledged for

381

their financial support. Access to the MS facility was enabled by the Operational Program

382

Prague – Competitiveness project (CZ.2.16/3.1.00/24023) and project LO1509 of the Ministry

383

of Education, Youth and Sports of the Czech Republic.

384

acknowledge the financial support of her short-term stay at the Aix Marseille Université

385

through the STSM-CM1003-300315-052174 fellowship.

386

The authors declare no competing financial interest.

E. Marková would like to

387 388

SUPPORTING INFORMATION

389

Table S1 Activation of wild-type and recombinant pro-tyrosinases by proteolytic cleavage.

390

Figure S1 SDS-PAGE of the cell extract from E. coli expressing the gene coding for the

391

hypothetical active part of tyrosinase from P. arcularius.

392

Figure S2 Purification of the trypsin-treated tyrosinase by size-exclusion chromatography.

393

Figure S3 Amino acid sequence of the His6-tagged pro-tyrosinase fusion protein.

394

Figure S4 Plot of initial rates of oxidation of L-DOPA catalysed by tyrosinase from P.

395

arcularius vs. substrate concentrations.

396

Figure S5 Effect of pH on the tyrosinase activity.

397

Figure S6 Effect of temperature on the tyrosinase activity (A) and stability (B).

398

Figure S7 Plots of initial rates of oxidation of aurones 2b (A) and 3c (B) catalysed by

399

tyrosinase from P. arcularius vs. substrate concentrations.

400

Figure S8 Effects of aurones 2a (A) and 3b (B) on L-DOPA oxidation catalysed by tyrosinase

401

from P. arcularius.

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402

Figure S9 Effect of aurone 1b on L-DOPA oxidation catalysed by tyrosinase from P.

403

arcularius.

404

Figure S10 Effects of aurones 1a (A) and 3a (B) on L-DOPA oxidation catalysed by

405

tyrosinase from P. arcularius.

406

Figure S11 Lineweaver-Burk plot of inhibition of tyrosinase from P. arcularius by aurone

407

1b.

408

Figure S12 Dixon plot of inhibition of tyrosinase from P. arcularius by aurone 1b.

409

Figure S13 Multiple sequence alignment of characterized fungal tyrosinases.

410

This material is available free of charge via the Internet at http://pubs.acs.org.

411

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addressing its activity. Mol. Biotechnol. 2015, 57, 45-57.

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Discovery of benzylidenebenzofuran-3(2H)-one (aurones) as inhibitors of tyrosinase derived

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from human melanocytes. J. Med. Chem. 2006, 49, 329-333.

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Figure 1. Structures of tyrosinase effectors examined in this work

562

Figure 2. Production in E. coli and partial purification of tyrosinase from Polyporus

563

arcularius. Lane 1: marker; Lane 2: cell-free extract; Lane 3: pro-tyrosinase purified by Ni

564

affinity chromatography; Lane 4: trypsin-treated tyrosinase; Lane 5: trypsin-treated

565

tyrosinase purified by size-exclusion chromatography. Molecular weight markers in kDa.

566

Pro-tyrosinase (68 kDa) and GroEL (60 kDa) in lane 3 and tyrosinase (43 kDa) in lane 5 are

567

indicated with arrows.

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Table 1. Activity of aurones towards tyrosinases from Agaricus bisporus, Streptomyces antiobioticus and Polyporus arcularius Tyrosinase from Compound

1a

1b

2a

2b

3a

3b

3c

Streptomyces

Polyporus arcularius

Agaricus bisporus

n.a.

n.a.

n.a.

I

I

I

(IC50 = 34 ± 3 µM)

(IC50 = 9 ± 1 µM)

(IC50 = 4 ± 1 µM)

H.A

H.A.

I

(145%)

(240%)

(IC50 > 1 mM)

S

S

S

(Km = 26 ± 9 µM)

(Km = 4.8 ± 0.1 µM)

(Km = 9 ± 2 µM)

n.a.

n.a.

n.a.

H.A

H.A.

I

(167%)

(150%)

(IC50 > 0.2 mM)

S

S

S

(Km = 63±20 µM )

(Km = 18.2±0.1 µM )

(Km = 0.20 ± 0.02 µM)

antiobioticus

H.A. = hyperbolic activation; I = inhibitor, S = substrate, n. a. = no activity; n.d. = not determined Note: The Km or IC50 (µM) towards each substrate or inhibitor, respectively, is given in brackets. Data for the tyrosinases from A. bisporus and S. antiobioticus are adopted from the previous work (Haudecoeur et al. 2014).

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Table 2. Biochemical properties of purified fungal tyrosinases Source

Identity, %

Molecular mass, kDa Specific activity,

Kinetic parameters,

(cover, %)a

-1 (Subunit/holoenzyme) U mg protein

Km, µM/kcat, s-1

(substrate)

Agaricus bisporus

Reference

(substrate)

40 (58)

65, 21/n.d.

27.4±3.4 (L-DOPA)

1.22/141 (L-DOPA)

(33)

Aspergillus oryzae

29 (50)

36, 18/102

n.d.

43/49 (L-tyrosine)

(26)

Pholiota microspora

55 (98)

42b, 44c/n.d.

412 (TBC)b

1,930/478 (L-DOPA)b

(27, 31)

(PPO2 isoform)

163/294 (TBC)b 189/162 (TBC)c Polyporus arcularius

-

43/79

127 ± 9 (L-DOPA)

1,040/223 (L-DOPA)

This work

84.3 (L-DOPA)

0.9/85 (L-DOPA)

(22)

30.2 (L-tyrosine)

1.0/41 (L-tyrosine)

303 ± 17 (TBC) Pycnoporus sanguineus

69 (98)

45/45

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Trichoderma reesei

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35 (67)

43/n.d.

15.4-23.0 (L-DOPA)d

3,000/22 (L-DOPA)

(23, 24)

0.42-0.54 (L-tyrosine)d a

comparing the amino acid sequences to tyrosinase from P. arcularius (template)

b

endogenous

c

recombinant

d

different for tyrosinases produced in different hosts (T. reesei, P. pastoris)

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R3 R4

B

R1

O R5

A R2

O

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1a R1, R3, R4, R5 = H; R2 = OH 1b R1, R4 = H; R2, R3; R5 = OH 2a R 2, R3, R5 = H; R1, R4 = OH 2b R2, R4, R5 = H; R1, R3 = OH 3a R3, R4, R5 = H; R1, R2 = OH 3b R3, R5 = H; R1, R2, R4 = OH 3c R4, R5 = H; R1, R2, R3 = OH

Figure 1

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kDa

1

2

3

4

5

97 66

 

45



30

21

14

Figure 2

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TOC graphic 191x129mm (96 x 96 DPI)

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