Refinement of the Geometry of the Retinal Binding Pocket in Dark

This latter distance allows us to check on the details of the active center of BR in the various published models derived from X-ray and electron diff...
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10066

Biochemistry 2000, 39, 10066-10071

Refinement of the Geometry of the Retinal Binding Pocket in Dark-Adapted Bacteriorhodopsin by Heteronuclear Solid-State NMR Distance Measurements† Michael Helmle,‡,§ Heiko Patzelt,‡,| Andreas Ockenfels,⊥ Wolfgang Ga¨rtner,‡,⊥ Dieter Oesterhelt,‡ and Burkhard Bechinger*,‡ Max-Planck-Institut fu¨ r Biochemie, Am Klopferspitz 18A, 82152 Martinsried, Germany, and Max-Planck-Institut fu¨ r Strahlenchemie, Stiftstrasse 34-36, 45470 Mu¨ lheim an der Ruhr, Germany ReceiVed March 23, 2000; ReVised Manuscript ReceiVed May 24, 2000

ABSTRACT: The bacterial proton pump bacteriorhodopsin (BR) is a 26.5 kDa seven-transmembrane helical protein. Several structural models have been published at g1.55 Å resolution. The initial cis-trans isomerization of the retinal moiety involves structural changes within