Reflections on the First Year of a Journal - ACS Publications

David Filmore. Assistant Editor. Felicia M. Willis. Senior Web Editor. Christine Brennan. Assistant Director Publishing & Creative Services. Bill Succ...
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Journal of Proteome Research (ISSN 1535-3893) is published bimonthly by the American Chemical Society at 1155 16th St., NW, Washington, DC 20036. Postmaster: Send address changes to Journal of Proteome Research, Member & Subscriber Services, P.O. Box 3337, Columbus, OH 43210. Copyright Permission: See copyright status form for certain rights (http://pubs.acs.org). Reprographic copying beyond that permitted by Section 107 or 108 of the U.S. Copyright Act is allowed, provided that the current per article fee is paid to the Copyright Clearance Center; please call the CCC at 978-750-8400 for more information. Republication or reproduction for sale of articles in this journal is permitted only by written permission from the Copyright Office, ACS, Washington, DC; 202-872-4368; fax: 202-7768112; [email protected]. Instructions for Authors and Copyright Status Form: Visit the journal website (http://pubs. acs.org/JPR) for instructions on preparing and submitting manuscripts and copyright forms to the Editor. Manuscript Submission: Manuscripts can be submitted via the journal website (http://pubs. acs.org/JPR) or mailed to the Editor, William S. Hancock, Department of Chemistry, Northeastern University, 360 Huntington Avenue, Boston, MA 02115.

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JournalofProteom e Research • Vol. 1, No. 6, 2002

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editorial EDITOR-IN-CHIEF

William S. Hancock Barnett Institute and Department of Chemistry Northeastern University 360 Huntington Avenue 341 Mugar Bldg. Boston, MA 02115 617-373-4881; Fax: 617-373-2855

Reflections on the First Year of a Journal

[email protected] ASSOCIATE EDITORS

Joshua LaBaer Harvard Medical School

György Marko-Varga AstraZeneca and Lund University EDITORIAL ADVISORY BOARD

Ruedi H. Aebersold Institute for Systems Biology

Leigh Anderson Large Scale Biology

Ettore Appella National Cancer Institute

Ronald Beavis Proteomic Solutions

Walter Blackstock Cellzome

Brian Chait The Rockefeller University

Patrick L. Coleman 3M

Catherine Fenselau University of Maryland

Daniel Figeys MDS Proteomics

Stanley Hefta Bristol-Myers Squibb

Donald F. Hunt University of Virginia

Barry L. Karger Northeastern University

Daniel C. Liebler University of Arizona

Matthias Mann University of Southern Denmark

Stephen A. Martin Applied Biosystems

Jeremy Nicholson Imperial College of London

J. Michael Ramsey Oak Ridge National Laboratory

Pier Giorgio Righetti University of Verona

John T. Stults

his issue of the Journal of Proteome Research (JPR) completes our first year of publication, and as editor, I am very grateful to be part of this scientific endeavor. It is rewarding to be able to reflect on the many fine JPR articles in print or press, especially given the journal’s track record of rapid publication coupled with excellent quality (not always coincident). This achievement is the result of hard work by the American Chemical Society (both in Washington, DC and Columbus, OH), the three JPR editorial offices, and most of all, the considerable enthusiasm of reviewers and authors. JPR has readily accomplished the goal of having six full issues in the first year, an attainment complemented by ASAP publishing of articles on our website at http://pubs.acs.org/JPR. The Web has allowed us to achieve a publication time of five weeks from submission to the posting of completely reviewed, fully edited research articles and clearly demonstrates the advantages of Web-based submission, review, and publication. Also, I would like to note that the first meeting of the JPR Editorial Advisory Board was held at the ACS national meeting in Boston and provided a welcome forum from which the JPR editors received a wide range of input. A key issue from the board was the need for the journal to have as wide a scope as possible for research reports. The board felt that for proteomics to be successful, the full scope of the field (ranging from microbes to mathematics to medicine) must be regularly presented in an integrated manner to the authors and readers. Therefore, in the second year of the journal we will emphasize the recruitment of papers from fields such as genomics, metabonomics, structural biology, bioinformatics, agriculture, and clinical chemistry. We will keep our focus on proteomics but include papers from other fields that produce data or information that is germane to proteomics. For example, protein expression data from genomics clearly overlaps with protein characterization studies. The observation of relevant biomarkers in a population study can aid in evaluating a proteomic study. Protein structural research can aid in establishing protein families. Metabonomic studies are of relevance to the monitoring of protein pathways. The integration of data from diverse fields is a tremendous challenge, and better visualization tools will be required before researchers will be able to mine the results in an integrated and global manner. An example of the need for visual clarification is the densely packed and difficult to interpret protein interaction maps generated by various affinity isolations of protein families. Such maps are but one example of the types of data sets that will be produced in the near future. Another comes from clinical proteomics, where a study of tissue should be tied to a patient’s record, which includes drug usage, disease progression, genotyping, and corresponding control tissue studies. So, as we move into our second year of publication, I urge you to consider sending the journal the widest possible range of papers from your laboratory, colleagues, and collaborators. The key focus for the journal is easily summed as biology, so that the context of development of new analytical approaches must be determined by the value that any such approach gives to solving the biology problem. The success or failure of proteomics will be determined by the insight that the new field gives to biological processes and hence to key problems such as the understanding of disease mechanisms.

T

Biospect, Inc.

Peter Wagner Zyomyx

Keith Williams Proteome Systems

John R.Yates, III The Scripps Research Institute

© 2002 American Chemical Society

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