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Bioactive Constituents, Metabolites, and Functions
A targeted screening approach to systematically identify the absorbed effect substances of Poria cocos in vivo using ultra-high performance liquid chromatography tandem mass spectrometry Guifang Feng, Shizhe Li, Shu Liu, Fengrui Song, Zifeng Pi, and Zhiqiang Liu J. Agric. Food Chem., Just Accepted Manuscript • DOI: 10.1021/acs.jafc.8b02753 • Publication Date (Web): 09 Jul 2018 Downloaded from http://pubs.acs.org on July 10, 2018
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A targeted screening approach to systematically identify the absorbed effect
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substances of Poria cocos in vivo using ultra-high performance liquid
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chromatography tandem mass spectrometry
4 5
Guifang Fenga, b, Shizhe Lia, b, Shu Liua, *, Fengrui Songa, Zifeng Pia, Zhiqiang Liua, *
6
a
7
Spectrometry in Changchun, Jilin Province Key Laboratory of Chinese Medicine
8
Chemistry and Mass Spectrometry, Changchun Institute of Applied Chemistry,
9
Chinese Academy of Sciences, Changchun 130022, P. R. China
State Key Laboratory of Electroanalytical Chemistry, National Center of Mass
10
b
University of Science and Technology of China, Hefei 230026, P. R. China
11
c
College of Chemistry, Jilin University, Changchun 130012, China
12 13 14 15 16
*Corresponding author: Shu Liu and Zhiqiang Liu
17
Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, 5625
18
Renmin Street, Changchun 130022, Jilin, China.
19
Tel.: +86-431-85262613; Fax: +86-431-85262044.
20
E-mail addresses:
[email protected](S. Liu),
[email protected] (Z. Liu)
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Abstract
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Poria cocos are extensively used as nutritious food, dietary supplements and oriental
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medicine in Asia. But its effect substances are still not very clear. In this study, a targeted
25
screening approach was developed to systematically identify absorbed constituents of Poria
26
cocos in vivo using ultra-high performance liquid chromatography tandem mass spectrometry
27
combined with UNIFI™ software. First, incubation reactions in vitro with rat intestinal
28
microflora and rat liver microsomes were conducted to sum up metabolic rules of main
29
constituents. Second, the absorbed constituents in vivo were picked out and identified based
30
on the results of metabolic study in vitro. Finally, the absorbed active constituents in the
31
treatment of Alzheimer's disease were screened by targeted network pharmacology analysis.
32
A total of 62 absorbed prototypes and 59 metabolites were identified and characterized in
33
dosed plasma. 30 potential active constituents were screened and 86 drug−targets shared by
34
absorbed constituents and Alzheimer's disease were discovered by targeted network
35
pharmacology analysis. In general, this proposed targeted strategy comprehensively provides
36
new insight for active ingredients of Poria cocos.
37
Keywords
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Poria cocos; absorbed constituents; ultra-high performance liquid chromatography tandem
39
mass spectrometry; targeted network pharmacology analysis
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Introduction
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Mushrooms have been widely used as nutritious food, dietary supplements and oriental
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medicine. Poria cocos is a medicinal fungus of the family Polyporaceae that grows on the
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roots of old, dead pine trees.
45
principle active components of Poria cocos.
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kinds of disease, such as cancer, diabetes, inflammatory, loss of memory, etc.
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cocos has also been used to make food supplements, such as soups, dishes, tea, snacks, and
48
desserts. And it also was used for making biscuits, cakes and bread owing to its potential
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promotion benefits for health. These potential application of Poria cocos attribute to the
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continued considerable levels of attention.
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substances of Poria cocos in vivo systematically.
52
[1-3]
Previous studies have shown that triterpene acids are the [4, 5]
[8-12]
They were widely applied to treat many [6, 7]
Poria
It is worthwhile to analyze the absorbed
Clarifying absorbed substances in vivo is a key step to study food metabolism.
[13, 14]
53
Unfortunately, the complexity of ingredients greatly restricts the study of its metabolic
54
components. [15, 16] And the oral administration of them makes it more complex to study these
55
components in vivo.
56
transformed by a series of intestinal bacteria. The transformed constituents would then be
57
converted under the action of liver microsomes before entering into the blood circulation. The
58
main enzyme in the system of liver microsomes was cytochrome P−450 (CYP450).
59
They play a great role in compounds metabolism in vivo through kinds of metabolic pathways,
60
mainly oxygenation metabolism. These metabolites absorbed into plasma can play a better
[17, 18]
All foods taken orally, must be exposed in intestinal tract and be
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[19, 20]
.
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pharmacological effect in specified sites of organism in vivo. Few studies pay considerable
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attention to these progressive metabolic processes for the identification of absorbed
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constituents in plasma. In fact, the metabolic types of each type structure of nature
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compounds varied with different characteristic chemical group. For example, glycosylated
65
saponins are metabolized via deglycosylation under the action of intestinal microflora, such
66
as ginsenosides.
67
methylation or other metabolic pathways under the action of CYP450.
68
challenge for complex drug metabolism is how to categorize metabolic pathways of each
69
compound and clarify the metabolic mechanism in possible specific sites.
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[21, 22]
However, the sapogenins were transformed via the oxygenation, [23]
The major
Development of various of analytical technologies facilitate the identification and of
unknown
and
trace
substances
in
72
Quadrupole−time−of−flight mass spectrometer, taken as an example, needs small amount
73
sample for analysis with its well−known selectivity and sensitivity.
74
machine has developed several scan functions, as it shared a quadrupole, T−wave element
75
and time−of−flight cells. And the derived developed data−independent acquisitions, such as
76
data dependent acquisition (DDA) and data−independent mass spectrometry (MSE), can
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collect all mass data of precursor and fragment ions fully.
78
acquisition modes provide a powerful platform for compounds detections with rich chemical
79
mass information. Based on these acquisition methods, more automated software has been
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developed for detection and analysis, such as QI and UNIFI™ software. [34] The development
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[32, 33]
samples.
25]
quantification
4
complex
[24,
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[26-31]
Besides, this
In general, several of
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of software based on mass spectrometry has also verified the importance of compound
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metabolism from another perspective.
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For every component detected in plasma, it must have one or more targets for therapy in
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vivo, which known as effect substances. [35, 36] The more components were detected in plasma
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in vivo, the more targets were involved in therapy possibly. Herein, the action mechanism of
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absorbed constituents in vivo is a complex biological active network. Elucidation of these
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effect substances and related targets by some methods is conducive to better clinical
88
application. Fortunately, collecting potential drug−targets and clarifying complex molecular
89
mechanisms is available, with the development of bioinformatic database.
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collection work is still needed to do considering the complexity of multiple components and
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multiple drug−targets.
[37, 38]
Much
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In this study, a targeted screening strategy was developed to systematically identify the
93
absorbed effect substances of Poria cocos in vivo. The targeted screening of metabolites from
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in vitro to in vivo was accomplished under the assist of UNIFI™ software. And the final
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objective of this study was to describe the absorbed effect substances of Poria cocos by using
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targeted network pharmacology analysis. We believe that this exploration of absorbed
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substances would promote better application of Poria cocos as supplement food and herbal
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medicine.
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Materials and Methods
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Materials and reagents
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Poria cocos was purchased from Hebei Kaida Traditional Chinese Medicine Co. Ltd
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(Hebei China). All herb medicines were identified by Prof. Zhiqiang Liu (Changchun
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Institute of Applied Chemistry, Chinese Academy of Sciences). Eight reference standards of
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dehydrotrametenolic acid (1), 16α−hydroxytrametenolic acid (2), polyporenic acid C (3),
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poricoic
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3−o−acetyl−16α−hydroxydehydrotrametenolic acid (7) and pachymic acid (8) were obtained
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from purification engineering technology research Center of Sichuan Province natural
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medicine (Sichuan China). NADPH (Nicotinamide Adenine Dinucleotide Phosphate) was
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purchased from R&D. The analytical−grade reagents, ethyl acetate, n−butanol and absolute
110
ethanol were provided by Beijing Chemical Works (Beijing China), and deionized water was
111
purified using a Milli−Q water purification system (Milford, MA, USA). HPLC−grade
112
acetonitrile and formic acid were obtained from Fisher Scientific (Loughborough, UK).
113
Leucine enkephalin and sodium formate was purchased from Waters (Milford, USA). All
114
other reagents were of analytical grade.
115
Preparation of Poria cocos extract
B
(4),
dehydrotumulosic
acid
(5),
tumulosic
acid
(6),
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The Poria cocos powder was immersed in eight times of 75% ethanol aqueous solution
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for 2 h, and then refluxed twice for 2 h each. The combined ethanol extracts were filtered
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with gauze to remove any solids, and concentrated by rotary evaporation under vacuum to a
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certain volume. One part was kept to feed rats (equivalent to 0.4 g of crude powder per
120
milliliter), while the rest were lyophilized to get extract powder. All of them were stored at
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−20 °C before the experiment.
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Animals
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Male Sprague−Dawley rats (weights 200 ± 20 g) were obtained by Dalian Medical
124
University (Dalian, China) (SCXK (Liao) 2015−0001). They were provided with standard
125
laboratory food and water and maintained on a 12−hour light/dark cycle in an
126
air−conditioned animal quarter at constant temperature (22–24°C) and humidity (50% ±
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10%). The animals were fasted overnight with free access to water before any experiment. All
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rats were randomly divided into 3 groups (n = 6 for each group), one group was selected as
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control group and administrated with normal saline, the rest were marked as 1 h and 2 h
130
groups after oral administered with Poria cocos (3 g kg–1). All the experimental procedures
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were performed in accordance with the Guide for the Care and Use of Laboratory Animals of
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Jilin University.
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Incubations of Poria cocos standards with intestinal microflora in vitro
134
This part work was completed referring to the previous work, including collection and
135
preparation of intestinal bacteria mixture, incubation of Poria cocos standards with intestinal
136
bacteria in vitro, namely tumulosic acid, poricoic acid B, and pachymic acid. [16]
137
Incubations of Poria cocos with rat liver microsomes (RLMs) in vitro
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The preparation of RLMs and determination of protein content was completed referring
139
to the reported experimental method. [39] The process of incubation is roughly as follows. All
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incubations were performed at 37 °C in a shaker. All stock solution of standards was prepared 7
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in methanol solution. The final concentration of methanol in the incubation was less than
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0.2% (v/v). The prepared RLMs were carefully thawed on ice before the experiment. RLM
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proteins (0.5 mg/mL) were added to a solution of standard (20 mM) in a medium containing
144
100 mM potassium phosphate buffer (pH 7.4) and 10 mM MgCl2. The total incubation
145
volume was 150 µL. After pre−incubation for 3 min at 37 °C, the incubation reactions were
146
initiated by the addition of NADPH (1.0 mM). Control groups containing no NADPH or
147
substrates were conducted; each incubation was performed in duplicate. After a continuous
148
incubation for 60 min, the reactions were terminated with an equal volume of ice−cold
149
acetonitrile. The resulting mixture was centrifuged at 13,000 rpm for 10 min at 4 °C to pellet
150
protein. Then the supernatants were transferred to another centrifuge tube and 5 µL samples
151
were used for UHPLC−Q−TOF−MS (ultra-high performance liquid chromatography tandem
152
quadrupole−time−of−flight mass spectrometry) analysis.
153
Sample collection and preparation
154
The blood samples were collected in a 10 mL centrifuge tube with 10 µL heparin sodium
155
(1%). The plasma was obtained from the whole blood with centrifuged at 3500 rpm at 4 °C
156
for 10 min. The plasma samples were stored at −80 °C immediately. The protocol of the
157
sample preparation was described as below: 1 mL plasma was mixed with 4 mL
158
water−saturated butanol, vortexed for 30 min and centrifuged at 13000 rpm for 10 min. The
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supernatant was dried with nitrogen gas at 40 °C. The residue was dissolved with 100 µL
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methanol, and centrifuged at 13000 rpm for 10 min at 4 °C. 5 µL supernatant was used for
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UHPLC−Q−TOF−MS analysis finally.
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UHPLC−Q−TOF−MS Analysis
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An ultra-high performance liquid chromatography system (Waters ACQUITY UHPLC
164
core system, Waters), coupled with a Q−TOF SYNAPT G2 High Definition Mass
165
Spectrometer in electrospray ionization mode (Waters, Milford, MA, USA) was used to
166
obtain the specific and accurate masses of all samples. The source temperature was set at 110
167
°C, and the desolvation gas temperature was 350 °C. The flow rates of cone and desolvation
168
gas were set at 50 L h−1 and 600 L h−1, respectively. The voltages of capillary and cone in
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negative ion mode were set at 2.0 kV and 25 V respectively. Mass spectra were acquired over
170
the m/z 50–700 range with a scan speed of 0.2 s per scan in continuum mode. The targeted
171
precursor ions were fragmented in the first T−wave element (Trap) to generate the
172
low−energy spectra. The collision energy in the trap cell was set up at 10 V to maintain
173
metastable precursor ions. The precursor ions in metastable state can be fragmented in the
174
trap cell further. The collision energy in the trap cell ranged from 35 V to 45 V to generate the
175
high−energy spectra. Leucine enkephalin (m/z 554.2615 in negative ion mode, 0.2 ng µL−1)
176
was used as lockspray for real−time correction at a flow rate of 5 µL min−1. Sodium formate
177
was used to set up mass spectrometer calibration in negative ion mode.
178
The separation was performed by a Waters ACQUITY UHPLC BEH C18 Column (2.1
179
mm × 50 mm, 1.7 µm) at 30 °C. 0.1% aqueous formic acid (V/V) (A) and acetonitrile (B)
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were used as the mobile phase at a flow rate of 0.3 mL/min. Gradient programs were as
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follows for intestinal and liver microsomal samples: 0−2 min, 10%−45% B; 2−9 min,
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45%−70% B; 9−10 min, 70%−100% B; 10−11 min, 100% B. The gradient program was as
183
follows for plasma samples: 0−5 min, 10%−35% B;5−10 min, 35%−50% B; 10−20 min,
184
50%−100% B; 20−21 min, 100% B.
185
Targeted network pharmacology analysis
186
All the constituents absorbed in plasma were regarded as targets to retrieval in network
187
database,
188
(http://ibts.hkbu.edu.hk/LSP/tcmsp.php)
189
(http://bionet.ncpsb.org/batman−tcm/). STITCH is a relatively authoritative resource to
190
integrate interactions among metabolic pathways, crystal structures, and drug–target
191
relationships. In fact, the number of drug−targets reported were far more than that of recorded
192
in above database because of unresponsive update of these database. The systemically hunt
193
for drug−targets was conducted in the SciFinder Scholar, which is a largest and most
194
comprehensive database of compounds in the world. All chemical structure of constituents
195
absorbed in plasma were imported into SciFinder Scholar for retrieval.
196
The
including
AD
targets
STITCH
were
gathered
(http://stitch.embl.de/,
ver.5.0),
and
from
DisGeNET
TCMSP
BATMAN−TCM
(http://www.disgenet.org
197
/web/DisGeNET/menu/home, ver. 5.0), which is one of the largest discovery platform
198
containing available genes and variants associated to human diseases (Janet Pinero et al.,
199
2017; J. Pinero et al., 2015). A total of 2245 AD targets were gathered from the DisGeNET.
200
Then the common targets shared by drugs and disease were picked up.
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Cytoscape 3.6.0 (Liu et al., 2016) was applied to visualize the interaction among the
202
compounds, drug−targets, and diseases. Cytoscape is a software platform that offers functions
203
for visualizing data and biological pathways (T. Xu et al., 2017). In the graphic network, the
204
compounds, targets and diseases were regarded as nodes, and the interactions between these
205
nodes were linked by edges. The degree of a node is defined as the number of the edges
206
linked to it.
207
The Database for Annotation, Visualization and Integrated Discovery (DAVID,
208
https://david−d.ncifcrf.gov/, ver. 6.7) was applied for Gene Ontology (GO) enrichment
209
analysis. Homo sapiens were chosen as the current background. Enriched GO terms
210
(pathways) with p−value less than 0.001 (corrected with Benjamin step down) were collected
211
and analyzed. These terms were integrated to interpret the biological meanings of these target
212
genes datasets with comprehensive set of functional annotation tools of DAVID and KEGG.
213
Results and Discussion
214 215
Systematic workflow for characterize of metabolites of Poria cocos from in vitro to in vivo
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The systematic workflow is schematically depicted in Fig. 1. In step 1, the intestinal
217
microflora metabolites in vitro for the major triterpene acids (poricoic acid B, pachymic acid,
218
and tumulosic acid) were identified and structurally characterized based on the accurate MSE
219
date acquired by UHPLC−Q−TOF−MS. Then the metabolic rules under the action of
220
intestinal microflora metabolism in vitro for triterpene acids were summed up. In step 2, the
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CYP450 metabolites in vitro for the major triterpene acids were studied (dehydrotrametenolic
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acid, 16α−hydroxytrametenolic acid, polyporenic acid C, poricoic acid B, dehydrotumulosic
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acid, tumulosic acid, 3−o−acetyl−16α−hydroxydehydrotrametenolic acid, and pachymic acid).
224
The metabolites in the RLMs in vitro were identified and characterized. The main metabolic
225
pathways through the action of RLMs were summed up to construct a database of metabolic
226
pathways. In step 3, the chemical profile of dosed rat plasma was described using
227
UHPLC−Q−TOF−MS. Two screening method was developed by using the UNIFI™ software,
228
namely screening of prototypes and metabolites. The prototypes screening was based on a
229
compound library while metabolites screening was based on the prototype compounds and
230
metabolic pathways. All absorbed constituents were picked out, which were detected in
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experimental group and not in blank group. The mass behaviors and liquid retention time
232
were applied for confirming all absorbed constituents. In step 4, a targeted network
233
pharmacological analysis was conducted based on the absorbed constituents in plasma.
234 235
Characterize metabolites of representative triterpene acids transformed by intestinal microflora in vitro
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Three representative triterpene acids of Poria cocos were selected to identify their
237
metabolites and explore metabolic rules in intestinal microflora. They represent different
238
structural types of triterpene acids and are also the major constituents of Poria cocos.
239
Triterpene acids in Poria cocos mainly are divided into two types, namely 3, 4−secolanostane
240
(poricoic acid B) and closed−lanostane (pachymic acid and tumulosic acid). Notably, the
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existence of the acetyl group at C−3−OH position distinguished pachymic acid from others.
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However, only pachymic acid could be bio−transformed by deacetylation under the action of
243
intestinal microflora in vitro owing to the acetyl group linked to C−3−OH. It was explained
244
that the intestinal microflora composited of large amount of anaerobic flora, which live on
245
sugars, acids, proteins and so on, as a source of energy.
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and proteins in the 75% alcohol extract of Poria cocos. In general, few metabolites of Poria
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cocos could be detected under the action of intestinal microflora in vitro. And it was also
248
suggested that the triterpene acids of Poria cocos are mainly absorbed in the form of
249
prototype components.
250 251
[40-42]
There was no glycosyl group
Characterization of metabolites of representative triterpene acids transformed by RLMs in vitro
252
Eight representative triterpene acids in Poria cocos were selected to identify their
253
metabolites and explore metabolic rules in RLMs (Fig. 2). The stock standards (2 mM) were
254
incubated with NADPH system at different time points (30 min, 60 min and 90 min). The
255
mass data were obtained through the UHPLC−Q−TOF−MS under the MSE acquiring mode.
256
Metabolites screening was carried out with the aid of UNIFI™ software, which combined
257
with an extensive list of parent compounds and potential biotransformation reactions (e.g.,
258
dehydrogenation, oxygenation, methylation or arbitrary combination). The main filtering
259
parameters were set as followed: the mass error, 10 ppm and the retention time error, 0.2 min.
260
As the existence of structure of parent compound, the fragment information of all metabolites
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was presented in two spectra, namely high−energy spectrum and low−energy spectrum. More
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importantly, these metabolites could be confirmed manually through the rationality of every
263
fragment ion recognized automatically by Mass Fragment™ function in the UNIFI™
264
software. All identified metabolites were probably extracted to generate a series of extracted
265
ion chromatograms in each group.
266
Liver microsomes, also known as monooxygenase, can catalyze the oxidation process of
267
hundreds of compounds through the cytochrome P−450 (CYP450) in vivo. Eight reference
268
compounds were selected to explore as rich metabolic rules as possible through the action of
269
CYP450, considering little metabolites detected in the metabolic incubation with the action of
270
intestinal microflora. There were 27 metabolic types identified from metabolism of Poria
271
cocos in RLMs in vitro as shown in Table. 1. It was obvious that almost all standards were
272
metabolized via four pathways, namely M+O−H2, M+O, M+O2−H2, and M+O2, which
273
indicate that CYP450 metabolism in Poria cocos was featured with oxidation action. As the
274
difference of every triterpene acid of Poria cocos in chemical structure, the metabolic types
275
and numbers of each compound varied.
276
Poricoic acid B was a typical 3, 4−seco−lanosta type triterpene acid. Four metabolic
277
types of poricoic acid B were detected when incubating with RLMs in vitro, namely,
278
M+O−H2, M+O, M+O2−H2, and M+O2. Among, there were two mono−oxygenated products
279
extracted, the conversion yield of which reached at 85.5% and 108.0% (Fig. 3 (A−B)). This
280
result explicated that the 3, 4−seco−lansta structure shared more activity sites and higher
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transformation yield. Poricoic acid B generated a characteristic fragment ion at m/z 409.2768
282
[M−CH3CH2COOH]− at C−10 position in the negative ion mode as the base peak in the
283
MS/MS spectra (Ling, et al., 2012; W. Wang, et al., 2015). As the Fig. 3 (C−D) shown, these
284
two metabolites M+O (m/z 499.3090) at 3.02 min and 3.29 min in liquid chromatography,
285
shared three typical fragment ions at m/z 481.2905, m/z 425.2694 and m/z 409.2600,
286
corresponding to [M−H2O]−, [M−CH3CH2COOH]− and [M−H2O−CH3CH2COOH]−. It was
287
speculated that the hydroxyl group was substituted to a methyl group, which would be
288
fragmented easily. The 3, 4−seco−lansta structure makes two methyl end independent
289
compared with the closed structure of triterpene acids. It was explained that an independent
290
end was likely to be oxidized (Y. Li, et al., 2011). As the lack of standard reference material,
291
the metabolic sites couldn’t be confirmed absolutely and completely.
292
Polyporenic acid C, with an acyl group linked to the C−3 position and distinguished
293
form other triterpene acids, was used as an example to explain the metabolic rule. The acyl
294
group was proposed to be transformed to a hydroxyl through hydrogenation. In fact,
295
polyporenic acid C was biotransformed through four metabolic pathways, namely M+ H2,
296
M+O, M+H2O, M+O2, and M+H2O2. Apparently, the hydrogenation reaction happening to
297
polyporenic acid C was common. This result demonstrated that the metabolic sites of
298
polyporenic acid C was related with the acyl group linked to the C−3 position. At the same
299
time, the metabolic yield was calculated based on the peak area of liquid chromatograph of
300
parent compound, which was normalized as 100%. It was noteworthy that the peak area
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percent of biotransformed metabolites M+O, M+H2O, M+H2O2, M+O2, M+H2O2, and
302
M+H2O2 was 23.6%, 28.5%, 23.9%, 38.1% and 27.4% respectively, compared with the final
303
peak area of prototype compound polyporenic acid C. This indicted that polyporenic acid C
304
possessed high conversion yield and activity in the RLMs. In general, the metabolic pathway
305
of polyporenic acid C in RLMs in vitro took the M+O2 and M+H2O2 as the main metabolic
306
pathways.
307
Pachymic acid and 3−o−acetyl−16α−hydroxydehydrotrametenolic acid shared an acetyl
308
group at C−3−OH, which could be translated partially through the action of deacetylation
309
under the action of intestinal microflora. The deacetylation metabolite would be transformed
310
further under the action of CYP450. The conversion yield of pachymic acid is very low under
311
the action of CYP450, only the yield of double oxygenated metabolites can reach 2.7%. The
312
mass data of all metabolites of pachymic acid were listed in Table S1. A few metabolites of
313
pachymic acid were detected in vitro under the action of CYP450. On the other hand, it was
314
revealed that pachymic acid in prototype state was actual active ingredient in vivo. The
315
difference between pachymic acid and 3−o−acetyl−16α−hydroxydehydrotrametenolic acid
316
was the position of the alkene bond on the C−21 side chain substituents. The pachymic acid
317
was a 24, 31−ene−lanosta type structure while 3−o−acetyl−16α−hydroxydehydrotrametenolic
318
acid
319
3−o−acetyl−16α−hydroxydehydrotrametenolic acid under the action of CYP450 was a little
320
higher than that of pachymic acid relatively. It was speculated that the double bond on the
was
a
24,
25−ene−lanosta
type
structure.
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C−21 side chain substituents shared more activity of oxidation. And the metabolic types of
322
3−o−acetyl−16α−hydroxydehydrotrametenolic acid under the action of CYP450 were more
323
than that of pachymic acid. In that way, the 24, 25−ene−lanosta type structure shared more
324
active sites than that of 24, 31−ene−lanosta type structure in RLMs.
325
The structure of dehydrotumulosic acid and tumulosic acid is different from the numbers
326
of double bond on pentacyclic triterpenes. Tumulosic acid shares an 8−ene−lansta structure
327
while dehydrotumulosic acid shares a 7, 9 (11) −dien−lansta structure. The number and
328
metabolic types of metabolites for these two compounds were almost the same when
329
incubated with RLMs in vitro. It was speculated that the double bond on structure of
330
pentacyclic triterpenes had nothing to do with the site of oxidation in RLMs.
331
Characterization of metabolites of Poria cocos in rats in vivo
332
The metabolites in vivo of Poria cocos were analyzed by UHPLC−Q−TOF−MS in rat
333
plasma after oral administration, which was served as experiment group. The plasma with the
334
administration of distilled water to rats were served as the blank group. The blank plasm
335
sample dissolved with the extract of Poria cocos was served as control group. The
336
confirmation of prototypes was made by comparing with the data of accurate molecular mass
337
and retention time of control group. The compounds that can be detected in the both
338
experimental and control groups but not in blank group were defined as prototypes. As almost
339
all triterpene acids in the extract of Poria cocos share a carboxyl at the C−21 position, four
340
types of neutral losses were observed in MS/MS spectra, namely HCOOH (46 Da), CO2 (44
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341
Da), CO2+CH4 (60 Da) and HCOOH+CH4 (62 Da). These neutral losses were imported into
342
UNIFI™ software for distinguishing triterpene acids in dosed plasma. But the number of all
343
triterpene acids detected in the extract of Poria cocos exceed more than that in in-house
344
database, there must some compounds identified as isomers. A total of 62 prototype
345
constituents were detected in the dosed plasma, as listed in Table S2. Eight compounds were
346
confirmed with the reference compounds. These absorbed ingredients involved the main
347
active substances in Poria cocos. Notably, the mass errors of all identified constituents were
348
within 10 ppm of error.
349
The constituents absorbed in vivo would be further metabolized by various of metabolic
350
enzymes. The compounds not detected in the control and blank groups were defined as
351
metabolites. As the above study in vitro, only pachymic acid, sharing an acetyl group at C−3
352
position, were partly transformed into tumulosic acid through the deacetylation under the
353
action of intestinal microflora. Because both of tumulosic acid and pachymic acid can be
354
absorbed in vivo as prototypes, the action of intestinal microflora could be ignored when
355
screening metabolites in vivo. In that way, the screening of absorbed metabolites in vivo only
356
need to consider the effect of CYP450, which play a key role in compounds metabolism in
357
vivo. In fact, the oxidation action plays a large part in transforming triterpene acids under the
358
action of CYP450. The screening of metabolites was mainly based on four metabolic
359
pathways, namely M+O−H2, M+O, M+O2−H2, and M+O2. The neutral losses were applied to
360
distinguish structure type of triterpene acids. The formation neutral loss 74 Da or 72 Da
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(CH3CH2COOH/CHCH2COOH) under MSE acquiring mode were resulted from the 3,4−sec
362
structure type in mass spectrometry.
363
For example, precursor ion at m/z 453.33 was integrated in spectra for screening,
364
including blank, control, and experimental groups, as described in Fig 4. Compound P1 in
365
Table S2, was selected out based on compound screening under the UNIFI™ software. The
366
response intensity of compound at m/z 453.33 at 16.68 min in control group was relative high.
367
This compound was identified as dehydrotrametenolic acid, which was compared with the
368
retention time and accurate mass with of reference compound. Notably, there was a liquid
369
peak in experimental group at 16.68 min detected. The mass behavior of compound P1 in
370
experimental group was compared with that of dehydrotrametenolic acid in control group.
371
The compound P1 was identified as dehydrotrametenolic acid in dosed plasma in vivo.
372
Although a liquid peak could be observed in blank group, its mass behavior in mass
373
spectrometry was not constituent with that of reference of dehydrotrametenolic acid. This can
374
be defined as a false positive interference due to the complex matrix. In the other hand, this
375
result gave a proof of the importance of mass spectrometry and reference in identifying
376
compounds in complex matrix. More interestingly, there was another liquid peak M1 detected
377
at 14.64 min in experimental group but not in blank and control groups, as described in Fig. 4
378
(B). Next the MS/MS spectrum of this compound were taken into analysis. Just three
379
fragment ions were observed under the MSE acquiring mode based on the analysis of
380
UNIFI™ software, namely fragmentations at m/z 371.2571, m/z 359.2944, and m/z 319.2264.
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381
There was a neutral loss C6H10 (84) observed resulted from the elimination of side chain,
382
corresponding to fragment ion m/z 371.2571. But the formation of compound M1 still
383
remained unclear. Two causes can result in the formation of metabolite M1, the
384
transformation of isomers and the oxidation. As the lack of enough mass fragmentations and
385
reference information, the compound M1 couldn’t be characterized absolutely. Collectively, a
386
total of 59 constituents were detected and characterized as metabolites of Poria cocos in vivo,
387
which was based on the above analysis. Almost all metabolites were classified as the products
388
of oxidation and only a small part of them were confirmed as products of isomerization. That
389
was a key problem for screening metabolites of triterpene acids as they share same chemical
390
formula and similar fragmentation behaviors in mass spectrometry. A lot of work are still
391
needed to do about completely determining the structures of all metabolites. Collectively, the
392
metabolic profilie of Poria cocos was described through a targeted analysis strategy, which
393
considered the metabolic processes of foods taken orally. This result can also provide better
394
healthy support for Poria cocos as supplement food and herbal medicine.
395
Targeted network pharmacological analysis of the bioactive constituents.
396
There are so many compounds detected and characterized in the extract crude of Poria
397
cocos. However, not all constituents of Poria cocos were reported with potential activity. In
398
this section, we retrieved all components of Poria cocos absorbed in plasma in SciFinder
399
Scholar. First, the chemical structures were imported into the SciFinder Scholar for retrieval.
400
All literatures that have recorded the information of targeted compound were listed. The
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401
potential targets were selected out and collected sequentially. The related target proteins were
402
also gathered from several open source databases. A total of 30 constituents of Poria cocos
403
were summed to act with the potential targets finally. The targets of AD were also collected,
404
as the constituents of Poria cocos possess the potential activity towards AD. Only the target
405
proteins shared by drugs and disease were retained to construct the network as shown in Fig.
406
5 (86 targets). It was obvious that the larger target shared more edges with other targets, such
407
as CYP17A1, RARG, VDR, and NR3C1. A total of 198 targets were imported into the
408
bioinformatics database for GO enrichment analysis. When the background was chosen
409
Homo sapiens, only 143 targets were remained for further analysis. As shown in Table 2, the
410
pathways enriched with genes targeted by ingredients of Poria cocos were mainly involved in
411
human disease and material metabolism. Among the human disease, these were main
412
neurodegenerative disease and cancers. As well known, the problems in nervous system, such
413
as neurofibrillary tangles, neuroinflammation, and deposition of Beta amyloid, can cause the
414
incidence of AD. The material metabolism mainly focused on energy metabolism and lipid
415
metabolism. This result also reflected the multi−target and multi−function therapeutic feature
416
for the diseases treatment through complex compounds. The deep insight for Poria cocos in
417
treatment with AD can provide a new clue for further clinical application.
418
AUTHOR INFORMATION
419
Corresponding Authors
420
* E−mail address:
[email protected] (S. Liu)
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421
* E−mail address:
[email protected] (Zhiqiang Liu)
422
Tel.: +86−431−85262613
423
Fax: +86−431−85262044
424
ORCID
425
Shu Liu: 0000-0002-8848-6871
426
Funding
427
This work was supported by grants from the National Natural Science Foundation of China
428
Key Program (NO. 81530094) and General Program (NO. 81573574) and the Science and
429
Technology Development Project of Jilin Province (20170623025TC).
430
Notes
431
The authors declare that there are no conflicts of interest.
432
ABBREVIATIONS
433
AD: Alzheimer's disease; CYP450: cytochrome P−450; UHPLC−Q−TOF−MS: ultra-high
434
performance liquid chromatography tandem Quadrupole−time−of−flight mass spectrometry;
435
MSE: data−independent mass spectrometry; RLMs: Preparation of rat liver microsomes.
436
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Figure Captions
593
Fig. 1 Systematic workflow for targeted screening to systematically identify the metabolites
594
of Poria cocos in rats using ultra-high performance liquid chromatography tandem mass
595
spectrometry.
596
Fig. 2 Main structures of triterpene acids of Poria cocos which were incubated with RLMs in
597
vitro.
598
Fig. 3 Base peak chromatograms of control and experimental groups of poricoic acid B in
599
RLMs in vitro (A); extract ion chromatograms of metabolites M+O (m/z 499.306, mass
600
window, 0.02 Da) of control and experimental groups of poricoic acid B in RLMs in vitro
601
(B); proposed fragmentation pathway for metabolites M+O of poricoic acid B at 3.2 min (C)
602
and 3.29 min (D) in liquid chromatography.
603
Fig. 4 Extract ion chromatograms of compounds M1 (A) and P1 (B) in plasma in the control,
604
blank, and experimental groups through UHPLC−Q−TOF MS.
605
Fig. 5 Interaction network of the effect substances (in orange), the related target proteins (in
606
blue) and the common targets shared by drug and targets (in royal blue). A node stands for a
607
constituent, a target or disease, the interactions of two nodes were represented by a line and
608
the bigger size of a node refers to a greater degree.
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Table 1. Main metabolic types and numbers of triterpene acids in Poria cocos biotransformed
610
in RLMs in vitro. Numbers Peak
611 612 613 614
G S C B Q T A P Metabolic types 1 M−C2H2O−H2O−H2+O2 − − − − − − 1 − 2 M−C2H2O2−H2+O2 − − − − − − 3 2 3 M−C2H2O2+O2 − − − − − − 2 1 4 M−COO+H2O − − − − − − 1 − 5 M−COO−H2+O2 − − − − − − 2 − 6 M−C2H2O−H2+O2 − − − − − − 3 − 7 M−C2H2O+O2 − − − − − − 4 2 8 M−C2H2O−H2+O2+CH2 − − − − − − 1 9 M−H2 − − − 4 − − − 10 M+O−H2−H2 − 1 − − − 1 − − 11 M+O−H2 1 5 1 4 3 4 1 − 12 M+O 2 5 3 6 3 3 3 − 13 M+H2O − − 2 − − − − − 14 M+O2−H2−H2 − − − − 3 1 − 1 15 M+O2−H2 1 5 2 − 8 8 1 1 16 M+O+CH2−H2 − − − − − − 1 − 17 M+O+CH2 − 1 − − − − − − 18 M+O2 − 5 7 4 5 5 3 3 19 M+H2O2 − − 5 − − − − 1 20 M+O−H2+O2−H2 − − − − 1 1 − 2 21 M−H2+O2+O − 1 1 − 4 7 − − 22 M+H2O2+O2−H2 − − 5 − − 1 − − 23 M+H2O2+O − − 1 − − − 1 − − 2 − − − − − − 24 M−H2+O2+CH2 25 M+H2O2−H2+CH2 − − − − − 1 − − 26 M+CH2O2+H2 − − − − − − − − 27 M+H2O−H2+O2+CH2 − − − − − − 1 − Sum Metabolites 4 25 27 18 27 32 28 13 Note G: dehydrotrametenolic acid; S: 16α−hydroxytrametenolic acid; C: polyporenic acid C; B: poricoic B; Q: dehydrotumulosic; T: tumulosic acid; A: 3−o−acetyl−16α−hydroxydehydrotrametenolic acid; P: pachymic acid.
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Table 2 Disease associated pathways of PC through the GO enrichment analysis (P value