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A: Kinetics, Dynamics, Photochemistry, and Excited States
Total Absorption Cross-Section for UV Excitation of Sulfur Monoxide Karolis Sarka, and Shinkoh Nanbu J. Phys. Chem. A, Just Accepted Manuscript • DOI: 10.1021/acs.jpca.9b01921 • Publication Date (Web): 10 Apr 2019 Downloaded from http://pubs.acs.org on April 11, 2019
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The Journal of Physical Chemistry
Total Absorption Cross-Section for UV Excitation of Sulfur Monoxide Karolis Sarka∗ and Shinkoh Nanbu Department of Materials and Life Science, Sophia University, Tokyo 102-8554, Japan E-mail:
[email protected] 1
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Abstract In a new study on sulfur monoxide, new ab-initio potential energy curves are developed for excited states: A3 Π, B3 Σ− , C3 Π, C03 Π, and three unassigned in literature states that we name numerically: 33 Σ− , 43 Π, 53 Π. All these excited states have allowed transitions from ground state, X3 Σ− . The ab initio calculations were performed using MRCI-F12+Q/aug-cc-pV(5+d)Z level of theory implemented in MOLPRO2015. Based on close-coupling R-matrix theory, fine structure absorption cross-sections of isotopically substituted sulfur monoxide are calculated for wavelengths of 190–300 nm. The spectra are shown at highest possible resolution (FWHH ≈ 0.15 − 0.18cm−1 ) for reference and future studies. The effects of self-shielding and possible mutual-shielding are discussed.
1
Introduction
2
Sulfur monoxide, SO, is a highly reactive radical species, present in most combustion re-
3
actions of sulfur-containing molecules and an important part of present, 1 Archean, 2 and
4
extraterrestrial atmospheres. 3–6 It is also a precursor for formation of SO dimer (OSSO) 7
5
and a part of interstellar medium. 8 It’s photochemical activity in present troposphere is
6
limited, because of the UV-absorbing ozone layer, but it is introduced to the stratosphere
7
through photodissociation of SO2 . 9 The mass-independent isotopic fractionation pattern ob-
8
served during SO2 photolysis is shown to be consistent with the data from stratospheric
9
aerosols, 9 but no such effects are considered for SO, which largely shares the same excitation
10
energy region.
11
In addition, SO has a major role in atmospheric sulfur cycle of anoxic atmospheres, where
12
it is formed by photodissociation of SO2 emitted through volcanic outgassing, and leads to
13
production of gaseous elemental sulfur. Sulfur monoxide shares a part of the absorption
14
spectrum with S2 (230–270 nm), 10 reinforcing shielding effects through mutual-shielding on
15
top of the self-shielding based mass-independent isotopic fractionation of S2 . SO also absorbs 2
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16
light in the same wavelength range (190–220 nm) 11 as it’s chemical source - SO2 - introducing
17
self- and mutual-shielding interactions in this region as well.
18
Sulfur monoxide has been subject to many studies so far. Numerous experimental works
19
analyze the rotational spectroscopy. 12–16 Liu et al. have recorded absorption spectra and
20
rotational analysis using degenerate four-wave mixing (DFWM) experiments. 17 Elks and
21
Western studied fluorescence, excitation lifetimes and rotational constants on A3 Π state using
22
multiphoton ionization techniques. 18 A computational work by Yu and Bian 19 analyzes the
23
excited electronic state potentials as well as the spin-orbit coupling between them. Works
24
by Borin and Ornellas analyzed the potential energy curves of low-lying singlet and triplet
25
electronic states of SO 20 and A3 Π ←−− X3 Σ− transition. 21 A study by Phillips et al. 22
26
presents low resolution UV spectra for B3 Σ− − X3 Σ− transition, which has been replicated
27
accurately by Danielache et al. 23
28
Because of implied short lifetime of a radical species, sulfur monoxide is generally not
29
considered as a contributor to isotopic fractionation of sulfur in atmospheres and it is clear
30
that it’s incredibly difficult to measure UV properties of SO in laboratory setting with many
31
competing absorbers and high reactivity with itself. The reaction rates 24,25 indicate that it
32
may have a lifetime long enough (strongly dependent on the concentration of SO itself) to
33
be photoactive: 3
cm k=3.5e−15 molecule·s
SO + SO −−−−−−−−−−−−→ SO2 + S k=4.41e−31
cm6 molecule2 ·s
SO + SO + M −−−−−−−−−−−−−→ OSSO + M, 34
which, with an assumed concentration of [SO] = 2.5 × 1013 molecule and bath gas at [M] = cm3
35
2.5 × 1019 molecule , gives lifetimes of τ ≈ 11.4 s and 3.6 ms respectively. As such, the molecule cm3
36
should not be negated in isotopic fractionation considerations.
37
In this study, we show new ab-initio potential energy curves. Based on the reported re-
38
sults of other studies, both numerical and experimental, 12–16,19–21 the spectroscopic constants
39
from our study falls within range of previously reported data. Based on improved method-
40
ology of Danielache et al., 23 we present high resolution total absorption cross-sections for 3
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41
A3 Π ←−− X3 Σ− transition, and two nonadiabatically-coupled-potential ([C3 Π − C03 Π] ←−−
42
X3 Σ− , and [B3 Σ− − 3 3 Σ− ] ←−− X3 Σ− ) transitions. The present study improves on the
43
previous theoretical work of SO by Danielache et al. 23 by including ground state vibrational
44
modes v = 0 . . . 3 and rotational levels J = 0 . . . 90 (compared to v = 0 and J = 0 . . . 29).
45
In addition, the previous study did not include C3 Π ←−− X3 Σ− transition for bound-state
46
calculations. The nonadiabatic coupling matrix elements are now calculated using same level
47
of theory as the potential energy curves, improving their position and magnitude. Calcu-
48
lated spectra for all four sulfur-substituted isotopologues of SO are presented. Based on
49
the structure of absorption spectra lines, implications for self-shielding effect are shown and
50
discussed in detail.
51
Computational details
52
Ab-initio potential energy curves
53
The potential energy curves (PECs) were calculated with MOLPRO2015 26 quantum chem-
54
istry package using MRCI-F12+Q 27–29 /aug-cc-pV(5+d)Z 30 method (multireference config-
55
uration interaction with explicit correlation, and using Davidson-corrected energies, with a
56
tight-d augmented correlation-consistent, polarized valence quintuple-ζ basis set). The cal-
57
culations were performed on a uniform grid of 141 points in 1.1–2.5 range and 90 points in
58
2.55–7.0 for 4 lowest-lying states in A1 irreducible representation of C2v symmetry, and 5
59
states in each of A2 , B1 , B2 irreducible representations. The nonadiabatic coupling matrix
60
matrix elements were calculated using three-point DDR procedure. For this study, only
61
allowed transitions in triplet multiplicity were considered.
62
63
The rotational state energies for each electronic state at a particular vibrational level were calculated as: Ev,J = Ev,0 + hBe J(J + 1) − hαe (v + 0.5)J(J + 1) − hDe (J(J + 1))2 4
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The Journal of Physical Chemistry
where Ev,0 is a solution for a discrete state problem shown in next subsection and substitutes 2 the V (re )+hωe v + 21 −hωe χe v + 12 terms seen in the common expression for anharmonic potential; the spectroscopic constants used for the potential and evaluation of the quality of PECs were obtained as: h ¯ 4πµre2 s 1 d2 V (re ) 1 = 2π µ dr2 " # 2 Be2 re4 10Be re2 d3 V (re ) d4 V (re ) = − 4¯hωe2 3¯ hωe2 dr3 dr4 2Be2 2Be re3 d3 V (re ) +3 =− ωe h ¯ ωe2 dr3 4B 3 = 2e ωe " 2 # Be2 re4 d4 V (re ) 14re2 Be d3 V (re ) = − 16¯ hωe2 dr4 9¯ hωe2 dr3
Be =
(2a)
ωe
(2b)
ωe χ e αe De Y00
EZP E = hY00 +
hωe hωe χe − 2 4
(2c) (2d) (2e) (2f) (2g)
64
R-Matrix theory
65
For one-dimensional systems, one of the most prominent and accurate methods is the time-
66
independent R-matrix theory. The Schrödinger equation for the system including nonadia-
67
batic coupling can be expressed as: 1 1 d2 d 1 d − I 2 + V(r) − EI − M(r) + M(r) ψE (r) = 0, 2µ dr µ dr µ dr
(3)
68
where I is the identity matrix, V(r) is diagonal matrix of adiabatic potentials, and M(r) is
69
the matrix of nonadiabatic coupling elements. For a bound interval r ∈ [ri , rf ], the above
5
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expression can be rewritten as:
ˆ + V(r) − EI − U ˆ ψE (r) = L ˆ+D ˆ ψE (r), K
(4)
where → ← − − 2 1 d I d d ˆ =− I ˆ= K +L 2 2µ dr dr 2µ dr 1 d 1 d ˆ L=I δ(r − rf ) − δ(r − ri ) 2µ dr 2µ dr ← − − → ˆ = d M(r) − M(r) d U dr µ µ dr ˆ = M(r) (δ(r − rf ) − δ(r − ri )) D 2µ
(5a) (5b) (5c) (5d)
71
By selecting an orthonormal on all interval set of Nb basis functions ϕn (r), we can introduce
72
the eigenproblem:
ˆ + V(r) − εn I − U ˆ ϕn (r) = 0 K
(6)
73
To solve the Eq. 6 we expand the basis functions in terms of discrete value representation
74
(DVR) functions πj (r): ϕn (r) =
Nb X
(7)
cnj πj (r)
j=1 75
and we get a simple eigenproblem: (8)
Wdn = εn dn ,
76
where
c1 d= ··· , cNb
W1,1 · · · W1,Nb W= ··· ··· ··· WNb ,1 · · · WNb ,Nb
6
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77
The Journal of Physical Chemistry
and matrix elements Wi,j are: Z
rf
Wi,j =
(10)
ˆ + V(r) − U)π ˆ j (r)dr πi (r)(K
ri
78
Similarly, the solution to Eq. 4 can then be written as:
ψE (r) =
Nb X
(11)
Cn (E)ϕn (r)
n=1
79
The solution is then: ˜ r,ri (E)ψE0 (rf ) + ˜ r,r (E)ψE0 (rf ) + R ψE (r) = R f ˜ r,r (E)M(rf )ψE (rf ) + R ˜ r,ri (E)M(ri )ψE (ri ), R f
80
where ψE0 is the derivative of the wavefunction, and
˜ xz (E) = R
Nb X
(1 − 2δxz )
n=1
81
ϕn (rx )ϕTn (rz ) 2µ(En − E)
(13)
The wavefunctions can then be obtained through R-matrix propagation as:
82
(12)
ψE0 (rf )
ψE (rf ) Rf f (E) Rf i (E) , = Rif (E) Rii (E) ψE0 (ri ) ψE (ri )
(14)
−1 ˜ ˜ Rf f (E) Rf i (E) I − Rf f (E)M(rf ) −Rf i (E)M(ri ) = ˜ if (E)M(rf ) I − R ˜ ii (E)M(ri ) Rif (E) Rii (E) −R
˜ ˜ Rf f (E) Rf i (E) ˜ if (E) R ˜ ii (E) R
where
(15) 83
The discrete state energy levels are found by finding solution to: det[Q(r) (E) − Q(l) (E)] = 0
7
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The Journal of Physical Chemistry
84
where l and r indicate the direction of approach towards the sector containing the minimum
85
of potential, (ri , rs ) and (rs , rf ). The Q matrices are expanded as follows: (l)
(l)
(l)
(l)
Q(l) (E) = Rf i (E)Pi (E)[I − Rii (E)Pi (E)]−1 Rif (E) + Rf f (E) (r)
(r)
(r)
(r)
Q(r) (E) = Rif (E)Pf (E)[I − Rf f (E)Pf (E)]−1 Rf i (E) + Rii (E) p Pi (E) = δ 2µ(V(ri ) − E) q Pf (E) = δ 2µ(V(rf ) − E)
86
Results and discussion
87
Potential energy curves 80000 Potential Energy / cm−1
70000
3 −
3 Σ
’3
60000
C Π B3Σ−
50000
O(3P) + S(1D)
C3Π
40000
(17)
53Π
43Π
O(3P) + S(3P)
3
A Π
30000 20000
µ / a.u.
10000
3 −
X Σ
0 1 0.5 0
C3Π
3
4 Π
A3Π
B3Σ− 33Σ−
’3
C Π
NACME / cm
−1
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43Π − 53Π
C3Π − C’3Π
10
C’3Π − 43Π B3Σ− − 33Σ− 0
1
1.5
2 2.5 Internuclear Distance / Å
3
3.5
Figure 1: Potential energy curves for bright electronic states of triplet SO 88
The potential energy curves were calculated based on MRCI-F12+Q/aug-cc-pV(5+d)Z
89
theory implemented in MOLPRO2015 and are shown in Fig. 1. The adiabatic electronic
90
states form two groups of nonadiabatically-coupled (NAC) potentials, in 3 Σ (B3 Σ− − 3 3 Σ – ) 8
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55000
3 −
3 Σ ’3
C Π 50000 Potential Energy / cm−1
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The Journal of Physical Chemistry
3 −
C3Π
B Σ
45000
40000 A3Π 3 −
X Σ 35000
1.2 1.4 1.6 1.8 2 2.2 2.4 2.6 2.8 Internuclear Distance / Å
3
Figure 2: Discrete state energy levels for
32
SO
91
and 3 Π (C3 Π − C03 Π, C03 Π − 4 3 Π, 4 3 Π − 5 3 Π) symmetries. For the purpose of the spectra
92
discussed in this article, the calculations included following transitions: single potential
93
transition to A3 Π ←−− X3 Σ− , and two coupled-potential transitions for [C3 Π − C03 Π] ←−−
94
X3 Σ− , and [B3 Σ− −3 3 Σ− ] ←−− X3 Σ− states. There is a visible hump on the potential energy
95
curve of 3 3 Σ− state at ≈ 1.7 Å, which is a result of a nonadiabatic coupling with a higher
96
3
Σ− state, but it could not be included in the ab-initio calculations due to convergence issues.
97
This limitation does not affect the end results, since it is a dissociative state with transition
98
energies above the energy range we are considering for this study.
99
The density of states increases significantly above the avoided crossing point for the B3 Σ−
100
potential at 50 900 cm−1 (196.46 nm). The potential well of the adiabatic state changes profile
101
from deep and narrow potential to broad and shallow, allowing for the increase in density.
102
Close to the top of potential barrier on C3 Π adiabatic state, where it is coupled with a
103
dissociative C03 Π state, a resonant behavior can be observed, as a result of narrow barrier
104
between bound and dissociative states, starting at 48 892 cm−1 (204.53 nm), as shown in
105
Fig. 2.
106
To evaluate the quality of the potential energy curves, spectroscopic constants were cal-
107
culated based on the approach shown in Eqs. 2a to 2g and are presented in Table 1. As
9
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108
can be seen, the potential energy curves are in good agreement with the previous studies,
109
both experimental and computational. One thing that our calculation adds that is essential
110
for our work, but missing from all other studies, (making the calculations necessary in the
111
first place) are the nonadiabatic coupling matrix elements between coupled states, allow-
112
ing further exploration of the system on a purely theoretical basis. Work by Danielache et
113
al. 23 did include nonadiabatic couplings, but they were calculated at different level of the-
114
ory than the potential energy curves (MRCI for PEC, versus CASSCF for NACs) and their
115
reported values of ωe (1095.24 cm−1 for
116
(see Table 1).
32
SO) are significantly different from other studies
10
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The Journal of Physical Chemistry
Table 1: Spectroscopic constants for isotopically-substituted SO potential energy curves Isotopologue State 32 16 S O X3 Σ− Calc. 19 Calc. 20 Calc. 21 Expt. 12 Expt. 13 Expt. 14 Expt. 15
S O
33 16
S O
34 16
S O
36 16
Te , cm−1 0 0 0 0 0 0
re , Å ωe , cm−1 1.492 1150.48 1.4865 1149.9 1.481 1153 1.493 1137 1.481 1148 1.481 1149 1150.695
ωe χe , cm−1 6.56 6.16 5.77 5.84 6.12 5.6 6.377
A3 Π Calc. 19 Calc. 21 Calc. 20 Expt. 12
38879.3 38334 38880 38931 38455
1.593 438.59 1.6196 408 1.613 420 1.719 371 1.609 413.3
1.562 1.98 1.84
0.62 0.60 0.62
1.6
0.6107
C3 Π Calc. 19 Calc. 20 Expt. 16
44908.9 44033 44038 44381
1.671 736.92 1.6692 713.3 1.681 747 1.654 694.2
5.25 5.71 21.6
0.566 0.5675 0.5596 0.578
B 3 Σ− Calc. 19 Calc. 20 Expt. 13 Expt. 14
41706.5 41314 41206 41629 41639.2
1.785 1.782 1.794 1.775
633.06 631.7 687 630.4 622.5
4.04 4.16
0.496 0.4959
4.79 2.6
0.5245 0.502
X3 Σ− Expt. 15
0
1.492
1144.65
6.49
0.703 0.7107
A3 Π C3 Π B3 Σ−
38879.3 44908.9 41706.5
1.593 1.671 1.785
436.37 733.19 629.85
1.546 5.197 4.00
0.62 0.56 0.491
X3 Σ− Expt. 15
0
1.492
1139.15
6.43
0.696 0.7039
A3 Π C3 Π B3 Σ−
38879.3 44908.9 41706.5
1.593 1.671 1.785
434.28 729.67 626.83
1.53 5.147 3.966
0.62 0.555 0.486
X3 Σ− A3 Π C3 Π B3 Σ−
0 38879.3 44908.9 41706.5
1.492 1.593 1.671 1.785
1128.97 430.39 723.14 621.22
6.32 1.50 5.06 3.895
0.684 0.62 0.545 0.478
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Be , cm−1 0.71 0.7152 0.721 0.7208 0.7208 0.7179
The Journal of Physical Chemistry
117
Absorption cross-sections
118
The absorption cross-sections for four isotopologues of SO, with isotopically-substituted sul-
119
fur atom were calculated ignoring all external broadening factors except for thermal broad-
120
ening, applied at T = 300 K. As seen in Fig. 3, the absorption cross-section features two
121
distinct absorption regions. The shorter wavelength bands, located at 191–235 nm range are
122
composed of transitions to [C3 Π − C03 Π] and [B3 Σ− − 3 3 Σ− ] groups of coupled potentials,
123
leads to the split in electronic state of the sulfur atom production, with a possibility to
124
obtain both through the nonadiabatic coupling between potentials. The other excitation
125
region, 235–300 nm range, consists of transitions to the A3 Π state, with a slight overlap with
126
the [B3 Σ− − 3 3 Σ− ] group, starting at ≈ 240 nm for the transitions from v = 0 , J = 0 state
127
of ground state and going up to ≈ 277 nm for v = 3 , J = 90. 10−16
σ / cm2
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10
−18
10
−20
10−22 10−24 10−26 10−28 10−30
32 SO 33 SO 34 SO 36
SO
200
220
240
260
280
300
λ / nm
Figure 3: Total absorption cross-section of sulfur monoxide at T = 300 K.
128
As a result of purely thermal broadening at T = 300 K, the simulated linewidths (FWHH)
129
are ≈ 0.18 cm−1 at λ = 260 nm and ≈ 0.15 cm−1 at λ = 200 nm. It is obvious that the
130
simulation of self-shielding effects are very sensitive to the resolution of the spectra, due
131
to proximity of absorption bands of different isotopologues and all competing absorbers, 12
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σ / cm2
10−16
10
−17
10
−18
10−16
32
a
10−19
σ / cm2
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The Journal of Physical Chemistry
199.98 32
b
SO
33
SO
34
200 SO
33
SO
SO
36
SO
200.02 34
SO
36
32
SO
S2
10−18 10−20 10−22
251.88
251.9 λ / nm
251.92
Figure 4: Excitation wavelength sensitivity for (a) self-shielding of SO; (b) self- and mutualshielding of SO (solid lines) and 32 S2 (red, dashed lines). 132
as indicated by Figs. 4a and 4b. It can be seen in Fig. 4a that even in the case of high-
133
resolution spectra of competing absorbers missing, the isotopologue-specific absorption needs
134
to be taken into account when modeling complex photochemical systems. Fig. 4b shows the
135
absorption cross-sections of isotopically-substituted SO overlapped with the spectrum of one
136
of the competing absorbers in an anoxic atmosphere –
137
effect is even more wavelength-dependent as a result of mutual-shielding caused by the
138
continuum band of S2 . While self-shielding and mutual-shielding are expected to be very
139
significant under interstellar conditions, in atmospheres they have to be considered with care.
140
Based purely on the spectra it is evident that the shielding effects are expected to be very
141
large, however they also depend on the vertical distribution of the absorbers and the vertical
142
flux of species in question. The spectra are also susceptible to the variation in potential
143
energy curves: different anharmonic potentials would provide slightly shifted spectra and
144
result in different isotopic fractionation factors.
13
S S. 10 In this case the shielding
32 32
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Conclusions
146
Based on new ab-initio potential energy curves of sulfur monoxide, we have calculated high-
147
resolution absorption cross-sections for four sulfur-isotope-substituted SO molecules. We
148
have shown that the density of discrete states is significantly greater at excitation energies
149
close to avoided crossings for nonadiabatically-coupled electronic states. The high-resolution
150
absorption cross-sections contribute to the ongoing studies of isotopic fractionation and self-
151
shielding, which is worth considering both in isolation of a single species, as shown at λ ≈
152
200 nm wavelength, as well as in combination of both self-shielding and mutual-shielding of
153
competing absorbers, as shown at wavelength of λ ≈ 251.9 nm. The absorption cross-sections
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shown in this study can be used as a reference for groups trying to measure the absorption
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spectra of sulfur monoxide, as well as modeling community studying isotopic effects, and
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self-shielding in atmospheric photochemistry.
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Acknowledgement
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The authors thank the anonymous referees for their great comments on improving the article.
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This work was supported by a Grant-in-Aid for Scientific Research (S) (No. 17H06105) from
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the Ministry of Education, Culture, Sports, Science, and Technology (MEXT), Japan and
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The Sophia University Special Grant for Academic Research, Research on Optional Subjects.
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Karolis Sarka is supported by a Japanese Ministry of Education, Culture, Sports, Science,
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and Technology (Monbukagakusho: MEXT) Scholarship.
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Supporting Information Available
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The potential energy curves are available to download as Supporting Information. Authors
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are happy to provide the full resolution absorption cross-sections upon request.
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The following files are available free of charge. 14
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• Potential energy curves for each electronic state
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• Electronic transition dipole moments from ground state
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• Nonadiabatic coupling matrix elements for all coupled states
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Graphical TOC Entry 55000
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Potential Energy / cm−1
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60
The Journal of Physical Chemistry
33Σ−
C’3Π 50000
3 −
B Σ C3Π
45000 40000 35000
A3Π 1.2
1.4
1.6
X3Σ−
1.8 2 2.2 2.4 Internuclear Distance / Å
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2.6
2.8
3
Potential Energy / cm−1
55000 1 2 3 4 5 6 7 8 9 10 11 12 13 14
The Journal of Physical Chemistry 33Σ− ’3
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C Π
50000
B3Σ− C3Π
45000 40000 35000
A3Π 1.2
1.4
1.6
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1.8 2 2.2 2.4 Internuclear Distance / Å
X3Σ− 2.6
2.8
3