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Two-Dimensional Liquid Chromatography: A State of the Art Tutorial Dwight R Stoll, and Peter W. Carr Anal. Chem., Just Accepted Manuscript • DOI: 10.1021/acs.analchem.6b03506 • Publication Date (Web): 28 Nov 2016 Downloaded from http://pubs.acs.org on December 1, 2016
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Analytical Chemistry
Two-Dimensional Liquid Chromatography: A State of the Art Tutorial Dwight R. Stoll1 and Peter W. Carr2
1 – Gustavus Adolphus College Department of Chemistry Saint Peter, MN, USA 2 – University of Minnesota Department of Chemistry Minneapolis, MN 55104, USA
*Address correspondence to
[email protected]; 507-933-0699
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Description – In this tutorial we discuss the motivations for doing two-dimensional liquid
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chromatography (2D-LC), and describe the commonly used implementations of the method. We
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review important guiding principles for method development, discuss the state of the art in 2D-
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LC performance as measured by peak capacity, and describe example applications from
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different fields that we hope will inspire new users to adopt 2D-LC for their analytical problems.
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Biography
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Dwight Stoll is associate professor and co-chair of the department of chemistry at Gustavus
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Adolphus College where he teaches courses in quantitative and instrumental analysis. His
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research is focused on the development of 2D-LC for both targeted and untargeted analysis.
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Biography
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Peter Carr is professor in the department of chemistry at the University of Minnesota –Twin
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Cities. His research has involved electroanalytical, thermoanalytical chemistry and separation
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science. His group have been involved in the study of the retention in GC, LC and SFC, the
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development of novel stationary phase for LC and most recently fast LC and 2D-LC.
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Analytical Chemistry
Opening Art
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1. Introduction
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In this tutorial we aim to capture the state of the art of two-dimensional liquid chromatography
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(2D-LC) by highlighting key background that will help readers understand where 2D-LC
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methods fit in the analytical chemist’s toolbox. We then review some of the most fundamental
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principles of 2D-LC. Finally, we show by way of selected examples the ways in which 2D-LC is
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being used in practice to efficiently and effectively solve challenging analytical problems in a
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variety of fields. This tutorial is most certainly not a comprehensive review; rather it is an
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introduction for interested but unfamiliar readers. Those looking for more depth and breadth are
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encouraged to consult a number of recent reviews1–7 and books8,
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appropriate we have drawn attention throughout this article to particular reviews that are
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especially relevant to specific topics. Finally, most of the nomenclature and terminology used
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here that are specific to 2D-LC are nominally consistent with those prescribed by Marriott and
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on 2D-LC. Where
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Schoenmakers. For more detailed explanations of some terms readers are advised to consult
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the most recent listing of terms, definitions, and nomenclature10.
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2. Motivations for more than one separation dimension
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Despite decades of development of liquid chromatography (LC), including recent technological
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advances (e.g., sub-two micron and core-shell particles, higher pressure and lower dispersion
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instrumentation) 1D-LC is often unable to quickly separate mixtures of interest. These failures
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generally involve two distinct types of problems: A) mixtures that are too complex in a general
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sense (e.g, the thousands of metabolites in biological samples) and thus outstrip the ability of
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1D-LC to entirely separate the mixture into distinct components (i.e. singlet peaks); and B)
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mixtures that are not necessarily complex per se, but contain several species of interest that
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are very difficult to resolve, either because there are just too many compounds to avoid
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overlap, or due to the presence of closely related compounds (e.g., enantiomers, structural
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isomers).
90 91
The Challenge of Complex Samples – Peak capacity is the metric most often used to define the
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limitations of 1D-LC in tackling type-A problems. Peak capacity is a theoretical construct that
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estimates the maximum number of peaks that can be fit, side-by-side at equal resolution
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(typically 1.0), within a given separation space11. Recent estimates for the maximum peak
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capacity that is achievable in 1D-LC of small molecules range from about 100 in analyses of ca.
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5-10 minutes to a few hundred in analyses of a few hours (assuming solvent gradient elution
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and RPLC). These numbers roughly double when discussing separations of peptides, in part
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because the extent of gradient peak compression is greater in this case, and inherently their
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greater sensitivity to a change in composition produces narrower peaks even if there were no 12, 13
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effect of on-column compression of the tailing side of the peak
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peak Overlap (STO) of Davis and Giddings14 allows estimation of the fraction of constituents in
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a sample that would be (on average) observed as chromatographically distinct (singlet) peaks
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for different combinations of sample complexity and peak capacities. Figure 1 shows the
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calculated results for sample complexities in the range of 5 to 1000 and peak capacities in the
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range of 100 (easily achieved by 1D-LC) to 3000 (only achievable in a reasonable time (< 2
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hour) by 2D-LC). We see that for a 50-component mixture, only about 50% of the compounds
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will be observed as distinct (i.e., resolved) peaks, whereas a peak capacity of 3000 increases
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the fraction of compounds observable as singlet peaks to about 95%. This surely is a valuable
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. The Statistical Theory of
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increase, but the difference becomes more profound as the sample complexity increases as
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shown in Fig. 1.
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112 113 114
Figure 1. Percentage of sample consituents that are resolveable as chromatographically distinct peaks
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(‘singlets’, with a minimum resolution of 1.0) as a function of the number of compounds in a sample and
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different separation peak capacities. Effective peak capacities of 100 and 200 are easily achieveable
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within 15 minutes using modern particle and instrument technologies. A peak capacity of 400 is more
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difficult to reach for small molecules, but can be reached within an hour for peptides. An effective peak
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capacity of 3000 is not accessible by 1D-LC in a practically reasonable time, but can be readily achieved
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by 2D-LC in one to two hours. Singlet peak numbers were calculated assuming the same concentrations
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for all components, and using Eq. 21 from Davis and Giddings .
14
122 123
The Challenge of Difficult-to-Resolve Mixtures – This issue is familiar to chromatographers in
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many application areas. When only a limited time is available to resolve an apparently ‘simple’
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mixture, we often find that the analysis time is controlled by the resolution of one or a few
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stubborn pairs of compounds which resist improvement despite changes to the easily
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manipulated separation variables such as eluent composition, stationary phase type or column
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temperature. Changes in the stationary phase type can often effect greater changes in elution
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pattern, but improvements in one critical pair frequently result in the lessening in the separation
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of another pair. The benefits of adjusting stationary phase differences can be enhanced
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somewhat through column coupling and selectivity tuning15. Ultimately though, we do not find
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ourselves much further ahead after changing the phase chemistry. Indeed, this issue is the
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driving force behind hundreds of papers devoted to replacing Edisonian trial and error with
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sophisticated methods to model retention and selectivity as a function of the method variables
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leading to the algorithmically directed optimization of the separation variables16. In spite of their
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sophistication, such model driven optimization approaches are also limited by low
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methodological peak capacities. The bottom line is that as chromatograms become increasing
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crowded, the chance of encountering an area of refractory peak overlap increases dramatically.
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When experimenting with different stationary phase chemistries we can often envision a phase
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that will resolve most of the sample components leaving a few unresolved components and then
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“magically” using a different phase chemistry that we know would ‘finish the job’ by resolving
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only the pairs of problematic peaks unresolved on the first column, We are now witnessing the
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emergence of commercial instrumentation, software, and a theoretical framework that allows us
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to realize this ‘magic’ in practice – this is precisely the type B problem that 2D-LC can solve,
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both effectively and efficiently.
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Figure 2 captures these ideas in the form of chromatograms, Panels A and B are simulated
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chromatograms for 15-minute gradient separations of a 20-component mixture, where each
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separation has a peak capacity of 200. The selectivities of the two phases are assumed to be
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moderately correlated (see panel D), as is expected for two quite different reversed-phase
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columns17. In spite of the modest correlation, there are some pairs of compounds which clearly
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co-elute on one phase, but are easily separated by the second phase (e.g., the compounds
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represented by the green points). In panels A and B areas of serious peak overlap (i.e.,
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resolution less than 1.5) are indicated by asterisks at the tops of the peaks. Consistent with our
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experience with real samples, we see that the regions of the chromatogram where overlaps
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occur are very different in the two cases. Now, one thought-experiment that is commonly
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discussed is – what would happen if we simply coupled these two columns together, in series,
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so that their complementary selectivities can be leveraged to more fully resolve the sample?
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The results of these thought experiments are easily realized through simulation in this case, as
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shown in panel C. Here we see, again consistent with our experience, that serial coupling of
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columns does resolve some of the problematic overlaps, but in the end the poor resolution is
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simply shifted to a different part of the chromatogram. The reason that this approach is only
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moderately helpful is that it is fundamentally limited by its peak capacity – because the
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chromatogram is relatively crowded, the chance of encountering overlap is very high. Coupling
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columns does little to improve peak capacity, especially if the total analysis time is not
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increased.
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Inspection of panel A shows that Column 1 does a nice job of separating 16 of the 20
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components but there are two areas of overlap denoted by an asterisk (*) in the figure. Each co-
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elution consists of two overlapping compounds (see the red and green points in panel D). For
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each of these pairs, the retentions of the overlapping compounds are very similar on Column 1,
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but rather different on Column 2. So, we do the thought experiment involving pulling the first pair
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of overlapped compounds from the outlet of Column 1 as a mixture and injecting them into
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Column 2 where they can be separated in a matter of seconds. Here we assume that the
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analysis time for each injection into Column 2 is 60 seconds, and that Column 2 has a peak
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capacity of 50 for each of these analyses. When this separation is finished, we immediately
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inject the second mixture into Column 2 (green compounds), and this separation is also finished
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within a minute. In this way we very effectively and efficiently fully resolve this mixture that could
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not otherwise be resolved by 1D chromatography.
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problem is no longer imaginary; we now have the ability to do such 2D-LC separations using
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commercially available instrumentation, supported by sophisticated control and data analysis
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software, resulting in separations that are fast, sensitive, reliable, and robust.
The proposed solution to this type of
184 185
186 187
Figure 2. Simulated separations by 1D- and 2D-LC that demonstrate the power and value of 2D-LC for
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difficult-to-resolve mixtures, as compared to simple serial coupling of columns with different selectivities.
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Panel A shows the separation of a hypothetical 20-component mixture with given stationary phase
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chemistry and a peak capacity of 200. Panel B shows the separation of the same sample, but with
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different stationary phase chemistry. Panel C shows the separation that would result from serial coupling
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the columns in (A) and (B). These three are all 1D separations. In contrast the panels on the right show
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what happens if the same columns used in C are used in a 2D separation. The relationship between the
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retention times of the 20 compounds on the two columns is shown in Panel D. Panels E and F show the
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sample; in this case the mixture is fully resolved in the same analysis time.
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D and D separations that result from a simulated multiple heartcutting 2D-LC separation of the same
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3. Different Implementations of 2D-LC Can Be Used to Address Different Types of
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Analytical Challenges
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The essential concept in 2D-LC is that one or perhaps many fractions of the effluent from the 1D
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column are transferred to (i.e., injected into) a 2D column; ideally the task of the 2D column is to
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separate all the unresolved analytes present in each fraction of the 1D effluent based on the
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differences in selectivity of the two dimensions. A diagram of the hardware commonly used for
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online comprehensive 2D-LC separations is shown in Fig. 3. This diagram emphasizes the
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importance of the valve, often called a modulator, which interfaces the 1D and 2D columns. The
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valve shown here has a symmetrical 8-port, 2-position design. Many other valve configurations
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have been described in the literature – the most comprehensive discussion of these options
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have been given by Schure and Cohen18, and Francois, Sandra, and Sandra19.
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Figure 3. Diagram of a typical 2D-LC instrument highlighting the centrality of the valve between the D
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detector and the D column that captures fractions of D effluent and injects them into the D column. The
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red arrow indicates that the change in valve position enables switching the role of each sampling loop
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between collection of D effluent and injection into the D column.
1
2
1
1
2
2
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Here we discuss four physically different ways that this 2D separation process is most often
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done in practice; others which are less commonly used, are described elsewhere20, 21. Three of
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these approaches are shown in Fig. 4; their pluses and minuses, and typical applications are
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given in Table 1. This tutorial focuses on 2D separations carried out online, and in time (not in
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space, as in 2D Thin Layer Chromatography or 2D Gel Electrophoresis). Less common
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approaches including 3D and in space separations are described elsewhere21–25.
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The simplest, by a wide margin, and earliest form of a 2D-LC method to be used extensively is
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the single heartcutting approach, denoted as LC-LC. As the name suggests, LC-LC involves the
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collection of a single fraction of 1D effluent and its subsequent injection into a 2D column for
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further separation. This is most commonly carried out using a valve equipped with a length of
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tubing having a volume that is sufficient to accommodate the 1D effluent fraction of interest. This
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is a simple and easy implementation of 2D-LC but it is rather limited in terms of its scope of
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application and the number of target unresolved analytes that can be addressed in a given
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analysis. Historically, LC-LC has most commonly been used for the quantitation of a small
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number of target compounds in a rather complex matrix. The pioneering work of Majors and
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coworkers on the determination of biologically active small molecules in matrices such as urine
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is a good example of such an application26. Currently, LC-LC is being applied to a wide variety
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of problems (see Section 6).
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Comprehensive 2D-LC the polar opposite of LC-LC is denoted here as LC×LC. In most cases
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the primary objective of LC×LC is generally to gain as much information as possible about the
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sample in a single 2D chromatogram. For example, in applications such as metabolomics27 or
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proteomics28 the objective is ideally to separate the analyte mixture completely thus simplifying
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the detector’s job; in such applications the detector is usually a mass spectrometer. In other
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cases, the sample may not be so complex per se, but the most valuable information might be
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the knowledge that all of the components of a particular sample are chromatographically
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resolved. This type of information is acquired in LC×LC by collecting discrete fractions of the 1D
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effluent at regular intervals (perhaps one fraction every 15 to 30 s), and then these fractions are
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transferred one at a time to a 2D column. This collection and transfer process (referred to as
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sampling, or modulation) typically begins early in the 2D-LC analysis, and continues for most of
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the analysis time (see Fig. 4B). In comparison to LC-LC, LC×LC is capable of providing
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information about a much larger number of analytes in a sample. The 2D chromatograms from
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such experiments can reveal peak patterns akin to those seen in GC×GC where groupings of
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specific analyte functionalities (e.g. alkanes, aldehydes, degree of unsaturation etc.) along
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vectors or arcs can be extraordinarily helpful for identifying unknowns or confirming compound
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identity29. This additional information comes at the cost of increased instrument complexity and
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often results in the loss of some information from the 1D separation due to undersampling (see
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Section 4.1). Nevertheless, when peak capacity is used as the metric of separation
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performance, it has been shown that the peak capacity of LC×LC exceeds that of 1D-LC
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starting below 5-10 min, and increases thereafter30–32.
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Between the extrema of LC-LC and LC×LC several groups have explored intermediate and
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hybrid implementations that blend concepts from both. Two such hybrids are discussed here;
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namely, multiple heartcutting (mLC-LC) and selective comprehensive 2D-LC (sLC×LC). In
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principle, mLC-LC is simply an extension of LC-LC in that single fractions from several 1D peaks
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are transferred one at a time to the second dimension for further separation. This extends the
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scope of applicability of the heartcutting approach, because more analytes can be targeted in a
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single chromatogram33, 34. Figure 2E/F implies that two adjacent but different regions of the 1D
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chromatogram are targeted to enable the full resolution of the sample by ‘finishing the job’ with
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the 2D column. In practice, however, what makes mLC-LC especially powerful is the ability to
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simultaneously collect a fraction from one 1D peak while separating the constituents of
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another35,
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parallel significantly improves the flexibility of LC-LC.
36
. That is, instrumentation that enables these two processes to be executed in
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The sLCxLC implementation is fundamentally quite different from mLC-LC, even though similar
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instrument hardware can be used for both. sLC×LC is selective in that only specific regions of
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the 1D chromatogram are targeted for further separation. On the other hand, it is comprehensive
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in Giddings’ meaning of “comprehensive” in that the resolution of the specific analytes taken
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from the 1D column is not diminished as a result of doing the sampling of the 1D separation. In
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the current literature the loss of resolution during the sampling process is termed undersampling
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(see Section 4.1). The figure illustrating sLC×LC (Figure 4C) shows that the 1D column effluent
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from 6.3 to 6.7 minutes was collected as six discrete, 4-second increments. At the end of the
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sampling period, each fraction is injected into the 2D column. In this example each 2D analysis
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time is 15 s. One major benefit of the sLCxLC approach is that the separation contributed by the
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1
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the two peaks eluting at about 6.38 and 6.55 minutes in the first dimension, and at 7.5 seconds
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in the second dimension. If the sampling time were much longer at 15 s or more, as is typically
D process can be maintained no matter how narrow are the 1D peaks. This is exemplified by
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the case in LC×LC, these two analytes zones would be re-mixed during the fraction collection
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and transfer processes, and thus would not be re-separated by the second dimension. A second
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significant advantage of sLC×LC over simple heartcutting is that it enables precise and accurate
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quantitation along with high resolution separation. In the case of heartcutting methods, the only
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way to ensure highly precise and accurate quantitation is to transfer a fraction volume that is
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much larger than the peak volume of the target analyte. This in turn makes the subsequent 2D
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separations more crowded compared to when smaller fractions are used. The alternative to a
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large fraction volume is to use a much smaller fraction centered on the middle of the target
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analyte peak – a true ‘heartcut’ – however, in this case even very slight shifts in retention of the
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target analyte can seriously compromise quantitative precision35, 37. This is why one must use a
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transfer volume that is larger than the peak volume to avoid losing analyte from the 1D
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separation.
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At this point it is important to note that all of the implementations of 2D-LC described here can
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be carried out in both offline and online modes. In the offline mode fractions of 1D effluent are
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first collected e.g. in vials or micro wellplates external to the instrument. Then, at some
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convenient time later, the collected fractions are sequentially injected into a 2D column. The
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beauty of this approach is that very high speed 2D separations are not as essential as in online
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LC×LC. Furthermore, it is conceivable that a very powerful offline 2D-LC separation could be
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carried out in two steps using a single, conventional 1D-LC instrument. Indeed, theoretically the
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highest possible 2D-LC peak capacities can be achieved in the offline mode38 although at the
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cost of significantly increased analysis time. In spite of these potential advantages, the vast
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majority of 2D-LC work over the past five years has been focused on the online mode wherein
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1
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Although this requires more sophisticated instrumentation, the resulting methods can be highly
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automated using state-of-the-art commercial instruments that are robust and precise.
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Maintaining 1D effluent fractions within the instrument minimizes sample contamination and
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losses, both of which are especially important when working with complex samples.
D effluent fractions are taken and transferred almost immediately to the second dimension.
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Figure 4. Visual comparison of different implementations of 2D-LC. Panel A shows the case of LC-LC
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(heart cutting 2D-LC) where in this case only a single fraction is injected into the D column. Note that in
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multiple heart cutting (mLC-LC, not shown) more than one region of the 1D effluent would be injected
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onto the D column. Panel B shows the case of LC×LC (comprehensive 2D-LC) where the entire D
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effluent is sequentially injected. Panel C shows the case of sLC×LC (selective comprehensive 2D-LC)
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where selected segments of the D effluent are injected comprehensively on to the D column .
2
2
1
1
2
320 321
Table 1. Comparison of key attributes of the major online implementations of 2D-LC. Number of Implementation
Target
Advantages
Disadvantages
Typical Application
Compounds Targeted analysis in Single Heartcut (LC-LC)
+
Simple; Powerful for
Limited to a few
complex matrix (e.g.,
highly targeted work
target compounds
drug metabolite in serum)
More complex
Multiple Heartcut
++
(mLC-LC)
(sLC×LC)
instrumentation;
target compounds
Quantitation can be tricky
Breaks link between
Selective Comprehensive
Amenable to more
+++
Quantitation of moderately complex mixture (e.g., mixture of achiral/chiral molecules) Quantitation of many
sampling time and 2D
More complex
compounds in
analysis time,
instrumentation
complex mixture,
providing more
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flexibility; Quantitation can be more robust
Slow speed of
(LC×LC)Full Comprehensive
++++
Most efficient way to
second dimension
obtain full view of
separation
sample composition -
significantly limits
can see several
contribution of first
hundred peaks in
dimension
reasonable analysis
separation to overall
time
resolution due to
Sample profiling/fingerprinting (e.g., metabolomics), discovery (untargeted) type analysis
undersampling
322 323
4. Best Practices for Highly Effective 2D-LC Separations
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When developing 2D-LC methods one encounters a number of key decisions which have no
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analog in 1D-LC. This has prompted the systematic study of 2D-LC method development
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resulting in a body of literature that serves to effectively guide such work. Given that most
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aspects of 2D-LC are more costly and complex than their counterparts in 1D-LC, we would like
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to make the most of the resources invested in these methods. LC-LC methodology is relatively
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well established, and excellent examples of highly effective methods are easily found. In
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contrast mLC-LC and sLCxLC are much newer, and extensive method development guidance is
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not yet available. Thus, in this section we focus on best practices for the development of LC×LC
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methods. To the extent that mLC-LC and sLC×LC methods involve some of the features of
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LC×LC methods, some of the concepts discussed below will naturally be highly applicable to
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these other implementations.
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4.1 The 1D Undersampling Problem
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“Undersampling” results in loss of resolution of analytes achieved in the 1D separation due to re-
337
mixing of those analytes during the sampling process (e.g., in the sampling loop). This is one of
338
the most important concepts that must be appreciated to develop high quality 2D-LC methods.
339
From the early conceptual work of Giddings39 and through the pioneering work of Murphy,
340
Schure, and Foley (M-S-F)40 the community has developed a sense for how frequently 1D
341
effluent should be sampled into the 2D separation for us to say that that the 1D separation has
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342
been sampled sufficiently rapidly. With this as a benchmark, we then say that any 1D separation
343
that is sampled less frequently than it ought to be is undersampled, and that the negative
344
consequences that arise from this are due to undersampling the 1D separation. Giddings stated
345
that under ideal circumstances the peak capacity of a LC×LC method will be the product of the
346
peak capacities of the two 1D separations that contribute to the 2D separation41. These ideal
347
circumstances include the idea that none of the resolution gained by the 1D separation is lost in
348
the process of collecting fractions of 1D effluent and transferring them to the 2D column39. In
349
practice this can never be completely achieved, but there are now guidelines for minimizing
350
such losses, and means to quantitatively account for the losses when they do occur. When the
351
time over which a single fraction of 1D effluent is collected is wider than the intrinsic width of the
352
adjacent 1D peaks prior to sampling there will be significant re-mixing of even those analytes
353
that were well resolved by the 1D column. Figure 5, which represents a reconstructed 1D
354
chromatogram, indicates the seriousness of these losses. In each case the same mixture of 100
355
randomly distributed components was studied. Figure 5A, in which sampling is quite fast, shows
356
only 51 peaks whereas Fig. 5B, which is at the M-S-F recommended rate of 4 samples per
357
8σ peak width (note – the more conventionally used peak width at half-height (w1/2) is equivalent
358
to 2.35σ) shows only 37 peaks. Upon an additional two-fold decrease in the sampling rate (see
359
Fig. 5C) the peak count decreases to a mere 23. Clearly the 1D separation is being seriously
360
undersampled and much of its resolving power (peak capacity) wasted.
361 1
1
362
Figure 5. Reconstructed D chromatograms that show the effect of undersampling on effective D peak
363
capacity. For a hypothetical sample containing 100 randomly spaced compounds, sampling at a rate of 5
364
samples per σ (ts = 0.2 σ) yields a chromatogram with 51 peaks. Increasing the sampling time to 2 σ
365
(Panel B) or 4 σ (Panel C) yields 37 or 23 peaks, respectively.
1
1
1
1
366
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Analytical Chemistry
367
Since the seminal work of Murphy, Schure, and Foley on this problem, several groups have
368
developed more quantitative approaches42–45. In collaboration with Davis we used Monte-Carlo
369
simulations to establish a relationship between the normalized sampling time (i.e., sampling
370
time (ts) relative to the native 1D peak width) and the extent of peak broadening caused by
371
undersampling. This yields an average 1D broadening factor, , which can then be used to
372
calculate a corrected 1D peak capacity that quantitatively accounts for the pernicious effect of
373
undersampling.
t < β >= 1 + 0.21 1 s σ
374
1 1
375
nc,corrected =
2
nc
(1)
(2)
376 377
In our view, estimates of the overall 2D peak capacity must include the reduced 1D peak
378
capacity resulting from undersampling43. This is especially true when one seeks to compare the
379
separation power of 1D-LC to LC×LC. Moreover, with this framework in hand, we are in position
380
to rationally approach other important method development, for example how much time should
381
be allotted for each 2D separation, because in the case of online LC×LC separations this is
382
directly linked to the sampling time.
383 384
4.2 Usage of the 2D Separation Space
385
In conventional 1D chromatography it is considered a best practice to use as much of the
386
available separation space (i.e., nominally, the analysis time) for separation of the mixture at
387
hand, and minimize empty space in the chromatogram. Working toward this goal typically
388
involves adjusting the elution conditions such that weakly retained compounds elute near the
389
dead time, strongly retained compounds elute before the end of the analysis, and compounds
390
eluting in the middle are spread out rather than clustered together in narrow regions. In principle
391
these goals also apply in 2D separations, but achieving them is often considerably more difficult.
392
From the point of view of method development, we typically aim to use different separation
393
modes in the two dimensions of a 2D separation such that the analytes in a mixture will
394
distribute themselves differently in the separation spaces of the two dimensions.
395
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396
A useful framework for thinking about the sample and separation modes is Giddings’s concept
397
of sample dimensionality46. Briefly, the idea is to consider the number and type of chemical
398
differences (dimensions) present in a mixture of analytes and then choose two separation
399
modes that are matched to these differences. This idea is best made clear by way of an
400
example. Consider the separation of a mixture of peptides resulting from the enzymatic
401
digestion of proteins. These peptides differ principally in their lipophilicity and charge at a
402
particular pH. The obvious choices for the two LC separation modes are: 1) ion-exchange LC
403
(charge); and 2) reversed-phase (RP) LC (lipophilicity). Once these two modes are chosen one
404
then optimizes the elution conditions in each dimension to arrive at a 2D separation that
405
maximally utilizes the available separation space (See Fig. 6).
406 407
Figure 6. SCX×RPLC separation of peptides from digestion of the monoclonal antibody Herceptin.
408
Adapted from ref. 47.
409 410
Fortunately, there are some analyte mixtures having dimensions of chemical variation that align
411
well with separation modes that are highly compatible as is the case with peptides. Solutes in
412
other mixtures are sufficiently variable in at least two chemical dimensions to lend themselves to
413
2D separation; however, the corresponding separation modes may not be highly compatible.
414
Notable examples among these are the separation of surfactants48–50, polymers7, and some
415
classes of biomolecules51,
416
demonstrated they entail the coupling of two separation modes that require serious
417
compromises in other aspects of performance, such as detection sensitivity (see Section 4.3),
52
. Although very nice separations of such mixtures have been
418 419
Whereas the examples discussed above use most of the 2D separation space (often well above
420
80%), many combinations of separation modes that are very attractive tend to produce 2D
421
separations that do not come close to maximizing usage of the separation space. Quantifying
422
the extent to which the 2D separation space is well used has been a major focus of research
423
over the past decade. Space occupancy metrics range widely in conceptual sophistication and
424
ease of application from simple ‘bin counting’ strategies53, 54 to ecological home-range theory55
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Analytical Chemistry
425
and fractal mathematics56. Many of these approaches were recently reviewed by Schure and
426
Davis57. One interesting approach that is quite new was not included in the comparison was the
427
Asterisk Equations metric of Camenzuli and Schoenmakers58. We refer interested readers to
428
Schure and Davis’s work that considered the strengths and weaknesses of these approaches,
429
recognizing that there still is no single approach that is stands out; indeed, they have suggested
430
that a combination of metrics may be the most informative57. Although we do not discuss any of
431
the approaches in detail here, understanding their strengths and weaknesses is quite important,
432
especially for those engaged in developing and optimizing LC×LC methods. Finally, it is
433
important to note here that dynamic adjustment of 2D elution conditions during the course of a
434
2D-LC separation can significantly improve the usage of the 2D separation space for a given
435
pairing of stationary phases59, 60.
436 437
4.3 Detection Sensitivity of 2D-LC Methods
438
All chromatographic methods lead to dilution of the analyte as a result of the entropically driven
439
dispersion of the analyte zone along the column. Because there are two chromatographic steps
440
involved in 2D-LC, dilution is a significantly bigger problem than in 1D-LC. It can be can be
441
ameliorated to some degree using a variety of strategies, but generally speaking it is one of the
442
many compromises we must manage in developing 2D-LC methods. The extent of dilution limits
443
the detection sensitivity of the method. It is evident that the dilution problem is compounded in
444
2D-LC because the analyte zone eluted from the 1D column is further diluted during the 2D
445
separation before being presented to the 2D detector. The seriousness of this problem was
446
discussed in detail by Schure61. Indeed, poor detection sensitivity has historically been a major
447
perceived disadvantage of 2D methods in general, and rightly so in the case of sample limited
448
applications and applications where detection sensitivity is among the more important
449
performance metrics.
450 451
In Schure’s study he made reasonable assumptions about the volume of 1D effluent that could
452
be injected into the 2D column. But this variable – nominally the ratio of volume of 1D effluent
453
injected to the volume of 2D column (more specifically, the volume normalized to the column
454
efficiency) - is a strong determinant of detection sensitivity in 2D-LC. In most situations the
455
maximum volume of 1D effluent that can be injected while yielding acceptable performance of
456
the 2D separation depends strongly on the retention of the analytes in the 2D column in two
457
different eluents: 1) the 2D mobile phase itself; and 2) the 1D effluent. Thinking about the 1D
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458
solvent acting as the 2D eluent is important because once the injected volume of 1D effluent
459
becomes significant relative to the dead volume of the 2D column, the 1D effluent in essence
460
becomes the 2D mobile phase at least for a fraction of the retention time. Two cases must be
461
discerned here: In Case A, the analyte is more strongly retained by the 2D column in the 1D
462
effluent relative to the 2D mobile phase, consequently a relatively large volume of 1D effluent
463
can be injected without compromising the performance of the 2D separation; in Case B, the
464
analyte is less retained in the 1D effluent relative to the 2D mobile phase, consequently only a
465
very little of the
466
compromised by the extra-column broadening at the 2D inlet – this situation rapidly leads to
467
volume overload conditions62,
468
peptides as described above - i.e., IEX followed by RPLC. Here fractions of 1D effluent that are
469
typically entirely aqueous are injected into a reversed-phase column and thus retention of the
470
peptides at the 2D column inlet is very high in the primarily aqueous eluents used in IEX.
471
Volumes of 1D effluent even exceeding the dead volume of the 2D column itself can sometimes
472
be injected without compromising the performance of the 2D separation. Under these conditions
473
there is extensive compression of the analyte band at the column inlet (i.e., the band is
474
focused), which enables us to overcome the volume overload problem. An illustrative example
475
of Case B is coupling of normal phase separation to a reversed-phase separation (see for
476
example ref. 51). In this case analyte retention is very low in the 2D column in the presence of
477
the 1D effluent that is primarily a low polarity organic solvent. This in turn forces the injection of
478
very small volumes of 1D effluent into relatively large 2D columns, and consequently poor
479
detection sensitivity. Sometimes separation modes such as NP- and RP-LC are described as
480
being incompatible. In our view this view is really driven by the need for detection sensitivity – if
481
sensitivity were not a big issue then mode compatibility would be easier to achieve compared to
482
the case where large volumes of 1D effluent must be transferred to the 2D column to provide a
483
detectable amount of analyte.
1
D effluent can be injected before the
2
D separation performance is
63
. The classic example of Case A is the 2D-LC separation of
484 485
Recently we have seen an increase in attention to detection sensitivity in 2D-LC and the
486
development of innovative approaches to improve the compatibility of separation modes
487
perceived as being incompatible, or only moderately compatible. Indeed, a number of papers
488
on the optimization of LC×LC have paid much more attention to the extent of analyte dilution
489
than seen in older work64, 65, 50. This is developing into a body of literature that is too broad and
490
deep to adequately summarize here. Some approaches that have been used to address
491
detection sensitivity and mode compatibility include: 1) online dilution of the 1D eluent stream
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Analytical Chemistry
492
with ‘weak solvent’ to focus the analyte zone at the 2D column inlet66,
62
493
modulation to focus the analyte zone prior to its introduction into the 2D column67, 68; 3) use of
494
solid phase trapping media (e.g., pre-columns)66, 69, 50; 4) partial evaporation of the 1D effluent
495
prior to introduction to the 2D column70, 71; and 5) solvent exchange to dramatically change the
496
properties of the analyte matrix from the 1D effluent to some other more desirable solvent72.
497
Among these, the solvent exchange concept of the Schoenmakers group and some of the
498
temperature modulation approaches of Groskreutz and Weber73 are the most recent innovations
499
and show great promise, however they are still in pioneering stages of development. Currently a
500
good strategy is to dilute the 1D effluent with a ‘weak solvent’ prior to injection of the mixture into
501
the 2D column because this combines effectiveness with ease of implementation. Following the
502
initial demonstration of this strategy by Oda and coworkers66 several groups have described
503
LC×LC work with either RPLC or HILIC in the second dimension74, 50, 62. When the 1D effluent is
504
diluted between the exit of the 1D column and the sampling valve, only a simple, low pressure
505
isocratic pump is required because the mixing of the 1D effluent and diluent is done at low
506
pressure, and the composition of the diluent is typically held constant throughout a 2D-LC
507
analysis62. Most examples involve the use of water as the diluent, and focused on improving the
508
peak shape in the 2D column and sensitivity at the 2D detector.
; 2) temperature
509 510
Given that changes in ionization state can have a tremendous effect on selectivity in RP
511
separations53, 75, there is considerable interest in 2D-LC separations using eluents buffered at
512
different pHs in the first and second dimensions76, 77, 47. In our recent work we were concerned
513
not only with the composition of the organic solvent/water mixture, but also the secondary
514
effects of the mismatch in pH levels different enough to cause changes in the ionization state of
515
ionogenic analytes in the two dimensions of a 2D-LC system. We found that the effects of pH
516
mismatch can be even more serious than a mismatch in solvent composition, but the pH
517
problem is easily solved using the dilution strategy and judicious choice of a buffered diluent78.
518 519
5. LC×LC Performance Benchmarks that Reflect the State of the Art
520
When will LC×LC do a better job than 1D-LC? This is a question that all those new to 2D-LC
521
should ask. Using best practices for optimizing LC×LC methods, the Carr, and Heinisch groups
522
carefully compared the effective peak capacities of 1D-LC and LC×LC separations of small non-
523
peptide (Carr) and peptide (Heinisch) mixtures, respectively, using both theoretical calculations
524
and experimental separations. Although the undersampling concept and its implications were
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525
discussed in the preceding section, optimizing the tradeoff between longer 2D analysis times
526
that favor higher 2D peak capacities and the corresponding diminution of 1D peak capacity that
527
results from undersampling is not intuitive. This has been discussed in detail in previous
528
papers79, 3 – we strongly encourage interested readers to look into these issues very carefully.
529
Initial work by the Carr group on separations of extracts of low molecular weight compounds
530
from corn seed showed that LC×LC provided higher peak capacities than did 1D-LC when
531
analysis times exceeded 5-10 min., when a fixed 2D analysis time of 21 s was used32. In a
532
follow-up study where they systematically varied the 2D analysis time, they found that the
533
LCxLC methods were clearly superior to the 1D-LC analysis, provided that the 2D analysis time
534
exceeded 12 s, for all total analysis times exceeding about 5-7 min as measured by both
535
calculated effective peak capacities and the actual number of peaks observed in experimental
536
separations of the corn seed extract30. Figure 7 from their work shows that the numbers of
537
peaks observed in LC×LC separations were maximized with 2D analysis times between 12 and
538
21 s.
539 540
Figure 7. Dependence of the number of peaks observed in LCxLC separations of corn seed extract on
541
the 2D-LC analysis time and the 2D cycle time. 2D Cycle times are: 40 (◊), 21, (○), 12 (∆), and 6 (□) sec.
542
The numbers of peaks observed in 1D-LC separations with the same analysis times are indicated by the
543
filled diamonds. Adapted from ref. 30. The largest number of peaks was observed with the D cycle time
544
is 21 s.
2
545 546
Similar work on peptide separations by the Heinisch group65 gave the results shown in Fig. 8. In
547
this graph the red points indicate experimental peak capacities for 1D-LC separations of
548
peptides taken from the literature, and the blue points indicate experimental peak capacities for
549
online LC×LC separations of peptides by the Heinisch group. If we extrapolate the blue line
550
back to smaller peak capacities we see that the blue line and red curve intersect at an analysis
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Analytical Chemistry
551
time of about 40 min. This indicates that 1D-LC should be superior at times shorter than 40 min.
552
and LC×LC should be superior at times longer than 40 min. This crossover time is a bit longer
553
than expected based on previous work with small molecules. However, the dependence of the
554
LC×LC peak capacity on analysis time must trend toward zero at shorter times, thus
555
extrapolation of the line shown leads to an overestimation of the crossover time. A more
556
accurate estimate of this point will require further experimental work in the range of analysis
557
time between 10 and 60 min. Nevertheless, the conclusions of this work are qualitatively
558
consistent with the primary conclusion of the Carr group – that online LC×LC remains superior
559
to 1D-LC at analysis times below 30 min, and that implementation of online LC×LC should not
560
be restricted to applications involving only the most complex samples and the longest analysis
561
times. This conclusion alone should support significant research and development in the area of
562
online LC×LC for the foreseeable future.
563 564
Figure 8. Comparison of effective peak capacities obtained in separations of peptides by 1D-RPLC (open
565
circles) and LC×LC with RP separation in both dimensions (filled circles). Adapted from ref. 65.
566 567
6. Example Applications from Selected Fields
568
The variety of areas where 2D-LC has been used is far too broad to be comprehensively
569
reviewed here. We refer readers interested in specific application areas to recent reviews of 2D-
570
LC in biochemical analysis80, small molecule pharmaceutical analysis6, large molecule
571
pharmaceutical analysis1, analysis of Traditional Chinese Medicines (TCMs)2, and polymer
572
analysis5, 7. Although there is great potential to apply 2D-LC in metabolomics, this area has not
573
developed at this point in time81. In this section we focus on recent applications of 2D-LC that
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574
either demonstrate the state of the art with respect to separation of a particular sample type, or
575
a novel application of 2D-LC to an analytical challenge that had not been addressed in the past.
576
6.1 Peptide Fingerprinting
577
2D-LC has been used very successfully in proteomics for about two decades. These are
578
typically comprehensive type separations, although a variant specific to peptide analysis
579
referred to as MUDPIT82 has been widely used with mass spectrometry as the most common
580
detector. In this context the 2D-LC techniques are mainly investigative tools, focused on
581
untargeted analysis, where the mass spectrometer is relied on for the bulk of the information for
582
identification of peptides, and thus optimization of the 2D-LC separation itself is not a priority.
583
However, with the explosive growth in biopharmaceuticals there has been an increasing need
584
for 2D-LC methods coupled to optical detection (e.g., UV absorbance or fluorescence) that are
585
lower in cost, robust, and quantitatively more precise, with sufficient peak capacity to enable
586
quantification of enzymatic digests of large proteins such as monoclonal antibodies or perhaps
587
mixtures of bio-therapeutic molecules. Sandra and coworkers47 have shown what can be done
588
with current commercial 2D-LC instrumentation to address these needs. Figure 9 shows a
589
LC×LC separation of peptides produced from a tryptic digest of the monoclonal antibody
590
Herceptin. The total analysis time was only 36 min. In this work they demonstrated that the
591
method was sufficiently robust and repeatable that it could be used to tease out very subtle
592
differences between tryptic digests of the Herceptin originator and a candidate biosimilar
593
molecule. This type of methodology undoubtedly has a very bright future.
594 595
Figure 9. LC×LC separation of tryptic peptides from Herceptin. Reversed-phase columns were used in
596
both dimensions, and detection was by absorption of UV light at 214 nm. Reproduced with permission
597
from ref. 47.
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Analytical Chemistry
598
6.2 Lipidomics
599
There has been steady growth of applications of 2D-LC in the challenging area of lipidomics3.
600
Recent work has focused on innovations in implementation of 2D-LC, and practical application
601
problems. For example, the Holčapek group has demonstrated the effective use of HILIC
602
separation as the second dimension of 2D separations30 which is rather uncommon. These
603
methods almost exclusively involve the use of quadrupole/time-of-flight (QTOF) mass
604
spectrometric detection to increase selectivity, enable quantitation, and help identify unknown
605
analytes. Sample matrices have ranged from specific tissues targeted in disease biomarker
606
studies to studies aimed at more thoroughly understanding the molecular composition of those
607
tissues. In some cases data have been reported for hundreds of different lipids found by 2D-LC.
608
The recent study of Ouyang and coworkers34 showed the power of modern mLC-LC technology
609
for the characterization of low molecular weight heparins. Heparin is a complex mixture of
610
sulfated O-linked polysaccharides that vary in both the degree of polymerization and monomer
611
composition. Figure 10 from this work shows a result of a mLC-LC separation of a heparin
612
mixture involving a 1D SEC separation of molecules that differ in the degree of polymerization
613
followed by a 2D separation using an ion-pairing RP separation. Each one of the six heartcuts
614
collected from the 1D separation yielded at least 11 easily detected but different polysaccharide
615
species separated by the 2D column. This example shows how hybrid 2D-LC methodologies can
616
be used to enhance the resolving power of LC separation focused on a very specific part of the
617
sample.
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618 619
Figure 10. Multiple heartcutting 2D-LC analysis of low molecular weight heparins. Panel A at left shows
620
the D size-exclusion chromatogram, as well as the regions (grey rectangles) where heartcuts of the
621
major peaks were made and transferred to the D RP column. The corresponding D chromatograms for
622
separations of these fractions are shown in Panel B. Reprinted from ref. 34. Copyright 2015 American
623
Chemical Society.
1
2
2
624 625
6.3 Surfactants and Polymers
626
Aside from proteomics, the other leading application area for 2D-LC over the past two decades
627
has been analyses for surfactants and polymers. The different types of online LC×LC used for
628
polymer analysis, as compared to other methods of polymer separation, were reviewed by
629
Schoenmakers and coworkers83. Recent developments in this area include the use of new
630
stationary phase technologies and higher column operating pressures to decrease overall
631
analysis time by improving the performance of both the 1D and 2D separations84.
632
Since the pioneering work of Murphy, Schure, and Foley demonstrating LC×LC separations of
633
alcohol ethoxylate surfactants49, improvements in the separation of surfactants have benefitted
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Analytical Chemistry
634
tremendously from advances in commercially available instrumentation and innovation in the
635
implementation of online 2D separations. For example, the Schmitz group has demonstrated the
636
coupling of online LC×LC and QTOF-MS detection for the separation and identification of more
637
than 100 surfactants varying in chain length and end group functionality (e.g., betaines,
638
sulfonates)48. These separations involved the use of HILIC separations in the first dimension
639
followed by RP separations in the second dimension, and were optimized to enable facile
640
coupling to MS detection without seriously compromising the performance of the 2D separation.
641
Most recently, Gargano, Schoenmakers, and coworkers showed that the use of trapping
642
cartridges in place of open sample loops enables both a decrease in overall analysis time, and
643
improvement in
644
tristryrylphenol ethoxylate phosphate surfactants is shown in Fig. 11. Here again the 1D
645
separation is carried out under HILIC conditions, while a RP separation is used in the second
646
dimension. The use of small (5 mm x 2.1 mm i.d.) trapping cartridges in place of open loops in
647
the valve interface allows the use of higher than normal 1D flow rates to minimize the overall
648
analysis time. Furthermore, sensitivity at the
649
transferred from the 1D column are focused by the trap cartridge before entering the 2D
650
analytical column.
2
D detection sensitivity50.
One of their online LC×LC separations of
2
D detector is improved because analytes
651 652
Figure. 11. LC×LC separation of phosphate tristyrylphenyl ethoxylates using HILIC in the first dimension
653
and RP in the second dimension. Adapted from ref. 50.
654
6.4 Pharmaceuticals
655
With the continued increases in the complexity of pharmaceutical products there are more
656
opportunities to leverage the power of 2D-LC to effectively and efficiently solve analytical
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657
challenges that are otherwise very difficult to address using 1D-LC6. These more complex
658
samples include products containing multiple Active Pharmaceutical Ingredients (APIs) in a
659
single drug product, APIs with multiple chiral centers, and drug products that contain both small
660
and large molecules (e.g. protein drug formulations with surfactant excipients). These present
661
challenges that are difficult if not impossible to solve using single 1D-LC methods. On the other
662
hand, complementary 1D-LC methods can be combined in a single 2D-LC method, dramatically
663
reducing the overall analysis time required to obtain the same information, and reducing
664
demands on instrumentation and operator costs. A instructive example of this is shown in Fig.
665
12 where achiral and chiral separations are combined in a single mLC-LC separation of warfarin
666
and hydroxywarfarin isomers85. This figure shows that neither the achiral nor the chiral
667
separation alone resolve the mixture. However, when the same separation modes are combined
668
in a multiple heartcutting 2D-LC separation, the selectivity of the achiral reversed-phase
669
separation used in the second dimension is highly complementary to the chiral separation used
670
in the first dimension, and provides enough selectivity to quickly resolve those components of
671
the sample that remain unresolved after passing through the 1D column.
672 673
Figure 12. 2D-LC separation of warfarin and hydroxylated isomers. The first dimension involves a chiral
674
stationary phase, and the D separation is achiral. This is a multiple heartcutting application where most
675
of the analytes are resolved by the first dimension, and the second dimension is used to finish the job.
676
Adapted from ref. 85.
2
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677
7. The Future
678
In the past ten years we have witnessed a transition from the use of home-built 2D-LC
679
instruments devoted to the development of the technology and basic research in the field to the
680
dominance of commercially available 2D-LC systems, either off-the-shelf, or with minimal
681
modifications. This is an exciting development in the field, because it puts researchers in a
682
position to focus on using 2D-LC to solve real analytical problems and distribute the resulting
683
methods for broad implementation. Obviously 2D-LC will continue to preside in application
684
areas where it has dominated in the past including proteomics and for certain types of polymer
685
analysis. We also expect to see growth in the use of 2D-LC in metabolomics and for other types
686
of very complex samples, including Traditional Chinese Medicines. All of these applications
687
demand the high peak capacities provided by LC×LC. Currently, however, the most rapid
688
growth in the use of 2D-LC involves the hybrid methodologies, such as multiple heartcutting,
689
and fast LC×LC applied to the analysis of moderately complex mixtures. These applications are
690
being facilitated by continued improvements in the performance and robustness of the
691
instrument components, as well as the ease-of-use of software needed for control of the 2D-LC
692
instrument hardware, and analysis of the large datafiles that result from this type of work.
693
At this time a critical question is whether or not 2D-LC methods will be adopted for use in quality
694
assurance and quality control environments where ease-of-use and robustness of the
695
instrumentation and methods are paramount. In the biopharmaceutical application space it
696
appears that adoption of 2D-LC in QA/QC may now be starting86. If 2D-LC is found to be
697
sufficiently valuable for specific analyses in these environments, then this will undoubtedly
698
accelerate the even wider adoption of the methodology and promote further development of the
699
technique.
700
In spite of recent progress, much more research is needed over the next several years to realize
701
the full potential of 2D-LC as a powerful, yet flexible and accessible analytical methodology.
702
Here we highlight a few key areas where innovation is likely to have the greatest impact.
703
Data Analysis – While algorithms for treating 1D chromatograms have been developed and
704
refined over the past decade, such algorithms for processing 2D chromatograms are much
705
younger and will benefit from further development and refinement. This is especially the case
706
when using mass spectrometric detection, where algorithms are particularly important and
707
effective treatment of the data by manual means is practically impossible.
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708
Enabling Coupling of Complementary Separation Modes – As has been forcefully argued by
709
Schoenmakers and coworkers87, 50, the wider adoption of 2D-LC for routine analyses will require
710
the more effective coupling of highly complementary (i.e., orthogonal) separation modes that
711
allow the greater use of the available 2D separation space. In sections 4.2 and 4.3 we argued
712
that in many cases the ability to couple highly complementary separations is strongly dependent
713
on the demand for high detection sensitivity. If high sensitivity is needed, this currently forces us
714
to couple separation modes that are inherently compatible, such as ion-exchange and RP
715
separations. Coupling complementary RP separations is very attractive for a variety of reasons4,
716
88
717
space on average89. Significant increases in the fractional usage of the separation space will
718
require innovations that enable better coupling of separation modes that historically have been
719
considered as only marginally compatible. Nevertheless, the impact of such innovation would be
720
far reaching - this could lead to the development of a set of universal analytical methods that
721
solve a wide variety of analytical problems by leveraging the high resolving power of 2D-LC with
722
minimal method development. This in turn would relax the demand for users with high level
723
expertise to use 2D-LC effectively.
724
Development of a Base of Expertise – In the current era of ‘doing more with less’, even in R&D
725
laboratories, one must ask how we as a community will develop the expertise needed to fully
726
realize the potential benefits of multi-dimensional separations. As training budgets are slashed
727
and the numbers of educated analytical chemists are reduced we are seeing an erosion in the
728
base of chromatographic expertise across the globe90, even for 1D chromatography. While the
729
solutions to these problems are not obvious to us, it is clear that without users trained in the
730
fundamentals of 2D chromatography even the most sophisticated instruments will be limited in
731
their application to solve real problems.
, but these separations typically enable usage of at best only about 60% of the 2D separation
732 733
Acknowledgements
734
We would like to thank Joe Davis for the contribution of Figure 5, and Gabriel Mazzi Leme for
735
helpful suggestions during the preparation of the manuscript. DS was supported by a Teacher-
736
Scholar Award from the Camille and Henry Dreyfus Foundation.
737 738
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