Unique and Unambiguous Specification of Stereoisomerism about a

May 1, 2002 - Chemical Abstracts Stereochemical Nomenclature of Organic Substances in the Ninth Collective Period (1972-1976). James E. Blackwood ...
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J. E. BLACKWOOD, C . L. GLADYS, A. E. PETRARCA, W. H. POWELL, AND J. E. RUSH

Unique and Unambiguous Specification of Stereoisomerism about a Double Bond in Nomenclature and Other Notation Systems J. E. BLACKWOOD, C. L. GLADYS, A. E. PETRARCA, W. H. POWELL, and J. E. RUSH* Chemical Abstracts Service, The Ohio State University, Columbus, Ohio

43210

Received January 2, 1968

In a previous communication, rules for unambiguous specification of stereoisomerism about a double bond using the descriptors E and Z were reported. These rules have been complemented to permit the derivation of a unique set of configurational descriptors for a compound. Use of these descriptor sets with chemical nomenclature and other forms of constitutional description of a compound is discussed.

In a previous paper ( I ) a set of rules was described which permits unambiguous specification of stereoisomerism about a double bond employing the configurational descriptiors E and 2. The purpose of this paper is to report the extension of these rules to permit the derivation of a unique set of configurational descriptors for each compound which contains one or more stereogenic ( 2 ) double bonds. The descriptor E or 2 is assigned to each such double bond using Rules I and I1 ( I ) . Three additional rules, 111-V, provide for the derivation of the unique descriptor set for each compound.

RULES FOR SPECIFYING CONFIGURATIONS

ABOUT DOUBLE BONDS

E and 2 are defined as follows: I. For each double bond to be described configurationally, the priority of the two groups attached to each of the doubly bound atoms is determined according to the sequence rules of Cahn, Ingold, and Prelog ( 3 ) . 11. That configuration in which the two groups of higher priority are on the same side of the reference plane, Q (Figure l ) , is assigned the stereochemical descriptor Z ; the configuration in which these groups are on opposite sides is assigned the descriptor E. -Q

n

A-Q

(0) (b) Figure 1. Geometory of a pair of doubly-bound atoms, A and B, and their nearest neighbors

’Present address, Division of Computer and Informallon Science, The Ohio Slate University, Columbus, Ohio 43210

30

The application of these rules is illustrated below for the The two stereoisomers of 1-bromo-2-chloro-1-iodoethylene. groups of higher priority are marked in heavy type.

I

\

/

/c=%

H

(4

Br

CI \

/c=c (E)

/”‘ \

I

The rules stated for the assignment of the configurational descriptors E and Z are based entirely on the structure of the molecule. T o distinguish uniquely between compounds which are constitutionally identical but which differ in configuration a t one or more double bonds, it is necessary to identify the double bond with which each descriptor is associated. This is accomplished by application of Rules 111-V (below), which result from a logical extension Rules I and 11. 111. After assignment of the configurational descriptor, E or 2, to each stereogenic double bond, determine which of the four groups attached to each doubly-bound atom-pair is the most preferred according to the sequence rules of Cahn, Ingold and Prelog ( 3 ) .

IV. The stereogenic double bonds are then ranked in decreasing order of the most perferred group attached to each doubly-hound atom-pair. If the double bonds cannot be ordered completely on the basis of a comparison of the most preferred groups, any ties are resolved by comparison of the second most preferred groups, followed, if necessary, by a comparison of the third most preferred groups, and the fourth most preferred groups in turn. V . The configurational descriptors ( E and 2 ) are arranged in decreasing order according to the rank of each respective double bond. When the configuration of one or more stereogenic double bonds is unknown, a question mark (?) is used as the descriptor for that double bond and is placed in order with the other descriptors. This set of descriptors, together with some representation of constitution, provides unique and unambiguous specification of stereoisomerism about the double bonds in a compound. Rules 111-V are, of course, required only when there are two or more stereogenic double bonds in the molecule not JOURNAL OF CHEMICAL DOCUMENTATION

SPECIFICATION OF STEREOISOMERISM ABOUT A DOUBLE BOND all of which have the same descriptor ( E ,2 , ?). Application of Rules I-V to chemical nomenclature is illustrated by the following examples:

I.

‘Q=p‘

H

6.

H

F

0

CH,

8H3

f!H3

H

(E,Z,Z)-2,4,6-0ctatrienoic acid

$H3

(Z)-3,3,3’,3‘-Tetrafluoro[bicyclobutylidene]-2,2’-dione bis(dimethyl acetal)

The inverted CA Index name is: [Bicyclobutylidene]-2,2’-dione,3,3,3’,3’-tetrafluoro-,bis(di. methvl acetal), (Z)-

acH2 H

H3C

2.

I

fH3

c\cH