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The diversity of kale (Brassica oleracea var. sabellica): Glucosinolate content and phylogenetic relationships Christoph Hahn, Anja Müller, Nikolai Kuhnert, and Dirk Albach J. Agric. Food Chem., Just Accepted Manuscript • DOI: 10.1021/acs.jafc.6b01000 • Publication Date (Web): 30 Mar 2016 Downloaded from http://pubs.acs.org on April 5, 2016
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Journal of Agricultural and Food Chemistry
The diversity of kale (Brassica oleracea var. sabellica): Glucosinolate content and phylogenetic relationships
Christoph Hahn * 1 , Anja Müller 2 , Nikolai Kuhnert 2 , Dirk Albach 1
1
Carl von Ossietzky University Oldenburg, Institute for Biology and Environmental
Sciences, Carl von Ossietzky Str. 9-11, 26111 Oldenburg, Germany
2
Jacobs University Bremen, School of Engineering and Science, Campus Ring 8,
Research III, 28759 Bremen, Germany
* corresponding author: E-mail:
[email protected] Phone: 0049-441-798-3343
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Abstract
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Recently, kale has become popular due to nutritive components beneficial for human
3
health. It is an important source of phytochemicals such as glucosinolates that trigger
4
associated cancer-preventive activity. However, nutritional value varies among
5
glucosinolates and among cultivars. Here, we start a systematic determination of the
6
content of five glucosinolates in 25 kale varieties and 11 non-kale Brassica oleracea
7
cultivars by HPLC-DAD-ESI-MSn and compare the profiles with results from the
8
analysis of SNPs derived from a KASP genotyping assay. Our results demonstrate that
9
the glucosinolate levels differ markedly among varieties of different origin. The
10
comparison of the phytochemical data with phylogenetic relationships revealed that the
11
common name kale refers to at least three different groups. German, American and
12
Italian kales differ morphologically and phytochemically. Landraces do not show
13
outstanding glucosinolate levels. Our results demonstrate the diversity of kale and the
14
importance of preserving a broad genepool for future breeding purposes.
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Keywords: kale, cabbage, glucosinolates, HPLC-ESI-MS, phylogenetic relationships,
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KASP assay, SNPs
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Introduction
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Brassica oleracea L. is economically one of the most important species of the
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Brassicaceae family because cabbage is a widely consumed vegetable all over the
22
world. Worldwide production is 70 million tons.1 The major reason for this success is
23
large variation in morphology and use by humans of this vegetable. The morphological
24
variation ranges from white and red cabbage over broccoli, cauliflower, kale, kohlrabi,
25
Brussels sprout to lesser known varieties. All domesticated cabbage varieties are
26
believed to have originated from wild cabbage (Brassica oleracea var. oleracea) native
27
to different coastal habitats at the Mediterranean and Atlantic.2 The presently known
28
cabbage cultivars are likely to have originated independently in different regions of
29
Europe from various wild forms. Romans already cultivated several different kinds of
30
cabbage.3 Evidence for this hypothesis is given by the study of glucosinolates, for
31
example.4 Song et al. suggested that ancient forms of Brassica oleracea may be
32
thousand head kale and Chinese kale / kai-lan.5 The most recent study on the phylogeny
33
of Brassica reported B. oleracea to be phylogenetically close to B. juncea (L.) Czern.
34
(Indian mustard), B. incana Ten. (Mediterranean mustard), B. rapa L. (turnip rape) and
35
B. napus L. (rapeseed, hybrid of wild cabbage and turnip rape), as well as B. cretica
36
Lam. and B. montana DC. (other wild cabbage types).6 Surprisingly little is, however,
37
known about relationships of varieties within B. oleracea. Louarn et al. demonstrated
38
polyphyly of white cabbage using AFLP (Amplified Fragment-length Polymorphism)
39
but did not resolve relationships among varieties.7 In contrast, Mei et al. resolved
40
broccoli as early branching in B. oleracea and sister-group relationships of kohlrabi and
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savoy cabbage, as well as white cabbage and Chinese kale but sampling with B.
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oleracea was too small to allow further inferences.8 Including all varieties is a huge task
43
given the enormous diversity in the species.
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Here, we focus on kale (B. oleracea var. sabellica L.), which is a valuable fresh
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vegetable during wintertime given its tolerance against frost. It is mostly assumed to
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have originated from wild cabbage occurring on cliffs and rocky coasts along the
47
Atlantic but this is still under dispute.2 Typical German kale differs from other cabbages
48
in their curly leaves. However, the term kale is rather widely used for different
49
morphological types of large-leafed B. oleracea varying in leaf morphology and
50
sometimes described as different varieties, for example. In general, kale is characterized
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by high levels of various nutrients and further constitutional metabolites like
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glucosinolates, flavonoids and carotenoids.9 In this study we investigate different kale
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varieties from various origins and countries (like Northern Germany, Italy, USA) that
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differ in traits like growth height, shape, leaf color and curling. However, what is not
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known is whether these geographical origins also form cohesive phytochemical and
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phylogenetic groups. The main question is, therefore, whether kale constitutes a
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homogenous group or whether regional groups of kale can be distinguished
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phytochemically and genetically.
59 60
The phytochemical analysis focusses on five frequently occurring glucosinolates in the
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leaves in late autumn. Glucosinolates are a large group of anionic, hydrophilic, sulphur-
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containing secondary plant metabolites. They make a significant contribution to the
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specific spicy cabbage flavor and bitter taste in Brassica crops.10 More than 100
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different glucosinolates are known11 and about 20 are predominant in Brassica sp.12
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They are derived from amino acids and can be grouped into aliphatic, aromatic and
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indole glucosinolates. The endogenous enzyme myrosinase (thioglucoside
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glucohydrolase) catalyzes the hydrolysis of glucosinolates to yield glucose, sulfate and
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aglycones. The aglycones then decompose to breakdown products like isothiocyanates,
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thiocyanates, indoles and organic cyanides (nitriles) – depending on the substrate, pH
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and availability of certain ions.13-15 Several isothiocyanates are found to exhibit
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anticancerogenic effects against various types of cancer, such as breast, lung and colon
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cancer.16-17 Compounds are bioavailable and show interference in early stages of cancer
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development by inducing detoxification enzymes (phase II enzymes), inhibiting
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activation enzymes (phase I enzymes) and triggering of cell cycle arrest or apoptosis.18-
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21
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cultivars is therefore an important aspect of Brassica breeding. We, here, investigate
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quantitatively the occurrence of five glucosinolates, i.e., the aliphatics gluconapin,
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progoitrin and glucoraphanin, the aromatic gluconasturtiin and the indole glucobrassicin
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(Table 1, Fig. 1). Most of these glucosinolates lead to metabolites that are associated
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with beneficial anticancerogenic properties (especially glucoraphanin22). Additionally,
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progoitrin and the aromatic gluconasturtiin contribute to the bitterness of cabbage.13, 23
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Progoitrin in particular is associated with the detrimental effect of potentially causing
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goiter (through the hydrolytic product oxazolidine-2-thione)24. It is generally assumed
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that bitter compounds are eliminated by breeding from commercially cultured plants.
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Therefore, we hypothesized that landraces have increased levels of these compounds
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compared with commercial cultivars. Glucosinolate profiles are known to differ among
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Brassica oleracea cultivars.25 Information on a broad sample of kale cultivars and
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determining specific glucosinolate profiles for certain groups of cultivars may therefore
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be beneficial for future breeding and choice of kale types for improved nutrition.
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Whereas glucosinolate levels are known to be influenced by various factors such as life
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cycle, temperature and fertilization, common origin is still considered a crucial aspect of
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phytochemical profiles.12
The occurrence and differences in specific glucosinolates among various Brassica
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For investigating relationships between different kales and their relation to other
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cabbage cultivars we made use of the single-plex SNP genotyping platform KASPTM
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(Kompetitive Allele Specific Polymerase Chain Reaction (PCR)). Genetic variation is
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measured on the basis of Single Nucleotide Polymorphisms (SNPs). They are useful for
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investigating genetic diversity and discriminating between cultivars and have been
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commonly applied in research on Brassica crops such as B. napus (e.g. Dalton-Morgan
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et al 26). SNPs are one of the most common type of genetic variation in eukaryotic
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genomes and most commonly found in the DNA between genes. The advantages of this
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assay are low average genotyping errors, cheap genotyping costs, as well as scalable
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flexibility in applications.27
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Here, we use SNP and phytochemical data with the aim to identify glucosinolate
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profiles specific to certain kale varieties. We hypothesize that different groups of kale
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have evolved in different parts of the world differing in their ability to synthesize
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different glucosinolates. Further, similarities between phytochemical profiles and
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genetic data allow to infer the relationships of kale varieties, especially the origin of the
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American kale varieties.
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Material and Methods
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Plant Material
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In March 2014, seeds of 25 varieties of kale (Table 2) as well as 11 non-kale Brassica
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oleracea cultivars were seeded in a greenhouse under natural daylight. When plants
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reached the 5-leaf stage, plants were transplanted in a randomized scheme into a field at
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the University of Oldenburg botanical garden. Water and fertilizer were applied
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according to standard cultural practices. Leaves were harvested in August/September
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2014.
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Quantification of the Glucosinolate Content
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Extraction from Plant Material. For each kale variety, 10 g fresh material of the
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youngest fully developed leaves were weighed (excluding the thick midnerves), treated
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at 120 °C for 2h15 (to inactivate the enzyme myrosinase), ground to a fine powder using
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a mixer mill, transferred to a screwtop vial and mixed with 8 mL of 70% v/v
125
methanol/water (of HPLC grade). The sealed vials were sonicated and then stored at
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-20 °C until further analysis. Two individual plants per variety were sampled.
127 128
Analysis. Kale leaf extracts were obtained after thermal deactivation of myrosinase as
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aqueous methanolic extracts. Extracts were profiled using an adapted liquid
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chromatography–mass spectrometry method (LC-MS) from the literature.28, 29 Five
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glucosinolates (i.e., glucobrassicin, glucoraphanin, gluconasturtiin, gluconapin and
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progoitrin; Fig. 1) were detected and quantified with high sensitivity by HPLC-qTOF-
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MS with negative ion electrospray ionization (ESI). A Bruker impact HD qTOF mass
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spectrometer (Bruker Daltonik GmbH, Bremen, Germany) coupled to an Agilent 1260
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Series HPLC system was used (Agilent Technologies, Santa Clara CA, USA),
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consisting of: Online Degaser G1322A, Bin Pump G1312B, High Performance
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Autosampler HiP-ALS G1367E, Thermostatted column compartment G1316A, Diode
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Array Detector DAD-VL G1315D. Before analysis, 2 mL of the extracted samples were
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filtered (0.45 μm pore size) into 2 mL screwtop vials. The HPLC-column was a 150 mm
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x 2 mm (2.8 μm particle size) Pursuit XRs Ultra 2.8 Diphenyl column (Agilent
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Technologies, Santa Clara CA, USA). The mobile phase was 0.005% formic acid
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(HCOOH) with an acetonitrile/water gradient (CH3CN) over 75 min at a flow rate of 0.5
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mL/min. The gradient profile increased from 5 to 75% linearly in 45 min followed by a 7 ACS Paragon Plus Environment
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return to 5% and 30 min isocratic to re-equilibrate. The eluate absorbance was
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monitored by an UV-detector at 229 nm. MS-scans were performed in the negative ion
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mode on the glucosinolate [M-H]- ions and spectra were recorded between m/z (mass-
147
to-charge ratio) 100 and 700 (capillary voltage: 4500 V, nebulizer: 1.8 bar, dry gas
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temperature: 200 °C, dry gas flow: 9 L/min). For quantification eight point calibration
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curves (see Supplementary Figure 1) were obtained for each glucosinolate from
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authentic reference substances (analytical standard glucosinolates from PhytoLab
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GmbH & Co. KG, Vestenbergsgreuth, Germany). Quantification was carried out in the
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negative ion mode on extracted ion chromatograms of each respective glucosinolate m/z
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value with isolation width of 0.002 Da. All Pearson correlation coefficients R2 were
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found to be above 0.99 and repeat injections yielding a relative standard deviation
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(RSD) below 5%. The lowest quantifiable amount is indicated for each glucosinolate by
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the signal-to-noise ratio (S/N) (see Table 3). Mass calibration was carried out using a
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0.01 mM sodium formate solution injected prior to each chromatographic run using an
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enhanced quadratic calibration algorithm. Spiking of the kale extract with authentic
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reference compounds was carried out with a RSD below 5% indicating that no
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appreciable matrix effect was operating.
161 162
Data Evaluation. For data evaluation, ESI Compass 1.3 Data Analysis software was
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used (Version 4.0.234.0, Bruker Daltonik GmbH, Bremen, Germany). Statistical
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analyses were conducted using the software R (v3.0.3, R Core Team30), specifically
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Analysis of Variance (ANOVA), Tukey’s HSD test and Pearson’s product-moment
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correlation analysis.
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Phylogenetic Analyses Using KASP-Assay
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DNA-Extraction and KASP Assay Analysis. For each variety, one intact, fully
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developed leaf was cut, placed in a plastic bag with silica beads inside and stored until it
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was completely dried. DNA was extracted from leaves using the innuPREP Plant DNA
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Kit (Analytik Jena AG, Jena, Germany) and afterwards stored at -20 °C until further
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analysis. The subsequent KASPTM assay, developed by KBioscience/LGC Genomics
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(Hoddesdon, Hertfordshire, UK), was carried out by TraitGenetics (TraitGenetics
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GmbH, Gatersleben, Stadt Seeland, Germany). Each sample was analyzed with 100
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KASP markers well distributed over the genome of Brassica oleracea. KASP assays
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rely on allele-specific oligo extension and Fluorescence Resonance Energy Transfer
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(FRET) for signal generation.31 In the KASP cycle, an allele-specific primer matches a
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target SNP and, with a common reverse primer, amplifies the target region. In a second
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PCR round, the reverse primer binds to the previously generated product and thus
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makes a complementary copy. In a third PCR round, a fluorescence-labeled oligo (FAM
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or HEX from FRET cassette) binds to the amplicon from the previous round.32, 33
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Data Analysis. Phylogenetic relationships were inferred using Bayesian Inference (BI)
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and Neighbor-Net methods. The BI analysis was conducted using MrBayes (v3.2.4,
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Ronquist et al.34) sampling across the entire GTR (general time reversible) model space,
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including gamma. Two independent runs of 10,000,000 generations were completed
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with four chains each (three heated, one cold). Trees were sampled every 100
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generations, the first 25% of generations were discarded as burn-in. A majority-rule
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consensus of the remaining trees from the two runs was produced with posterior
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probabilities. Siberian kale (B. napus var. pabularia DC.) was used as outgroup taxon.
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Compared to a phylogenetic tree, phylogenetic networks can often better illustrate the
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evolutionary history, e.g. in the case of hybridization. They display the extent of
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conflicting signals in the data.35 Neighbor-Net is a distance based method for
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constructing phylogenetic networks, based on the Neighbor Joining (NJ) algorithm.36 A
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Neighbor-Net was constructed using SplitsTree (v4.13.1, Huson & Bryant37) with
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uncorrected P-distances and ambiguous states were matched. A detailed description of
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the underlying mechanism of the method is given by Bryant & Moulton.38
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Results
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Quantification of the Glucosinolate Content
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The five glucosinolates previously described in kale gluconapin, progoitrin,
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glucoraphanin, gluconasturtiin and glucobrassicin were identified in the chromatogram
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based on their high resolution m/z value of their [M-H] pseudomolecular ion, which all
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showed errors below 5 ppm. Additionally the structures were confirmed using a tandem
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MS measurement with all glucosinolates showing characteristic fragment ions at m/z
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259.01 (C6H12O9S). Based on this characteristic fragmentation mechanism a search for
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previously unreported glucosinolates was carried out by construction of extracted ion
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chromatograms in All MSn mode (see Supplementary Figure 2). Isothiocyanate products
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(e.g., erucin, sulforaphane) are absent from the LC-MS chromatograms (see
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Supplementary Figure 4).
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The content of five glucosinolates were analyzed in different kale and cabbage samples,
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with two individual plants being measured for each variety with analytical duplicate
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measurements. The resulting levels, received with the help of reference standard
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measurements, are summarized in the Supplementary Table 1. The gluconapin content
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varied between 0.005 mg/100g fresh weight (FW) (Redbor) and 19.6 mg/100g FW
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(Vates) (Fig. 2). The American varieties (especially Georgia Southern, Champion and
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Vates) showed significantly higher gluconapin contents compared to all others (p
0.05). Additionally, the general lack of coherence
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among German landraces and German commercial cultivars indicates multiple origins
409
of German commercial cultivars from various Northern German landraces. Holterfehn
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and Jellen as well as Buss Bunde, Rote Palme and Diepholzer each have very similar
411
glucosinolate contents. However, looking at the phylogenetic results, none of them are
412
placed in a sister-group relationship. A lot of these Northern varieties have their native
413
region around the Northern German city “Leer” (Holterfehn, Jellen, Buss Bunde,
414
Lammertsfehn, Schatteburg, Neuefehn). In the BI phylogeny (Supplementary Figure 3)
415
they cluster nearly perfectly together. In the Neighbor-Net (Fig. 4) we find them also
416
quite near to each other.
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Flower-Sprout, a hybrid between kale and Brussels sprouts, is a newly developed hybrid
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cultivar originating in England (Gärtner Pötschke GmbH, Kaarst, Germany). It is not
420
known which kale variety was used as parent for hybridization, but with reference to
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Flower-Sprout’s red colored leaves it is imaginable that the parental variety also had red
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leaves (like Redbor or Rote Palme).
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Siberian kale was used as outgroup taxon in phylogenetic analyses because it belongs to
424
Brassica napus ssp. pabularia. The leaves of Siberian resemble those of kale a bit,
425
because it is believed that Brassica napus originated from hybridization between turnip
426
(Brassica rapa) and kale. Carlson et al. reported a high progoitrin and glucobrassicin
427
content in this variety.48 We instead found a high gluconasturtiin content, which is
428
consistent with studies on Brassica rapa.49, 50
429 430
Implications for health-oriented breeding
431
While we have assembled data on different aspects of the glucosinolate content and
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relationships of kale and demonstrated differences between regional origins, a number
433
of mechanisms may explain why glucosinolate levels differ between varieties. Several
434
sets of genes regulate the content of specific glucosinolates in different cultivars. Also
435
additional factors may influence the glucosinolate composition (soil properties, drought,
436
temperature, light etc.12). Since some of the glucosinolate metabolites exhibit cancer
437
chemopreventive or even anticancerogenic properties and others have rather detrimental
438
effects and can decrease food quality through bitter taste (due to high progoitrin levels,
439
for example23), there has to be a trade-off between beneficial and unfavorable
440
properties. A combination of different metabolites in plants should be aimed at. Most
441
potent breakdown products in terms of anticancerogenic effects are the ones of
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glucoraphanin, like the isothiocyanate sulforaphane.13, 51 Therefore kale varieties with
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elevated glucoraphanin levels are desirable as functional food with added health benefit.
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Frostara and Black Tuscany as well as red cabbage and Romanesco produce much
445
glucoraphanin. In comparison typical broccoli varieties contain around 10 mg
446
glucoraphanin per 100 g FW.28 As our quantitative data show glucoraphanin levels in
447
some kale varieties can be as high as ten times that of an average broccoli, which is
448
currently the gold standard with respect to provision of glucoraphanin dietary exposure.
449
In contrast, the American varieties, Palmizio and Lerchenzungen have rather low
450
amounts. Frostara at the same time produces comparatively much progoitrin, and so do
451
Siberian kale, the American kale, red and wild cabbage. These ones may therefore taste
452
more bitter. The aromatic gluconasturtiin is mostly present in low amounts in Brassica
453
oleracea, Siberian kale (B. napus) instead contains much higher volumes. The wide
454
range of variability in glucosinolates content among kale can be used as an information
455
for breeding and developing new varieties with enhanced benefits.
456 457
Abbreviations Used
458
AFLP, amplified fragment-length polymorphism; ANOVA, analysis of variance; BI,
459
bayesian inference; Da, Dalton; ESI, electrospray ionization; FRET, fluorescence
460
resonance energy transfer; FW, fresh weight; GTR, general time reversible; HD, high
461
definition; HPLC, high-pressure liquid chromatography; KASP, kompetitive allele
462
specific polymerase chain reaction; MS, mass spectrometry; m/z, mass-to-charge ratio;
463
NJ, neighbor joining; PCR, polymerase chain reaction; ppm, parts per million; qTOF,
464
quadrupole time of flight; RSD, relative standard deviation; S/N, signal-to-noise ratio;
465
SNP, single nucleotide polymorphism
466 467
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Acknowledgements
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We thank Vera Mageney for help with DNA extraction, Reinhard Lühring for seeds of
470
local Northern German kale and Holger Ihler and Gertrud Genz for assistance in the
471
cultivation of the plants.
472
Funding / Notes
473
The authors declare no competing financial interest.
474 475
Supporting Information Available
476
Supplementary Figure 1: calibration curves of glucoraphanin and glucobrassicin
477
Supplementary Figure 2: base peak chromatogram (BPC) and extracted ion
478
chromatograms (EIC) of kale variety Frostara
479
Supplementary Figure 3: Bayesian Inference phylogeny
480
Supplementary Figure 4: extracted ion chromatogram (EIC) of sulforaphane and
481 482
glucoraphanin in kale variety Buss Bunde Supplementary Table 1: glucosinolate values of analyzed kale and cabbage samples
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References
484
(1) FAOSTAT. Food and Agriculture Organization of the United Nations – Statistics
485
Division; http://faostat3.fao.org/download/Q/QC/E (accessed December 15, 2015).
486
(2) Körber-Grohne, U. Nutzpflanzen in Deutschland: Kulturgeschichte und Biologie, 2nd
487
ed.; Konrad Theiss: Stuttgart, Germany, 1988.
488
(3) Wittstein, G. C. Die Naturgeschichte des Cajus Plinius Secundus; Gressner &
489
Schramm: Leipzig, Germany, 1881.
490
(4) Mithen, R. F.; Lewis, B. G.; Heaney, R. K.; Fenwick, G. R. Glucosinolates of wild
491
and cultivated Brassica species. Phytochemistry 1987, 26, 1969-1973.
492
(5) Song, K. M.; Osborn, T. C.; Williams, P. H. Brassica taxonomy based on nuclear
493
restriction fragment length polymorphisms (RFLPs). 2. Preliminary analysis of
494
subspecies within B. rapa (syn. campestris) and B. oleracea. Theor. Appl. Genet. 1988,
495
76, 593-600.
496
(6) Arias, T.; Pires, C. A fully resolved chloroplast phylogeny of the brassica crops and
497
wild relatives (Brassicaceae: Brassiceae): Novel clades and potential taxonomic
498
implications. Taxon 2012, 61 (5), 980-988.
499
(7) Louarn S.; Torp, A. M.; Holme, I. B.; Andersen, S. B.; Jensen, B. D. Database derived
500
microsatellite markers (SSRs) for cultivar differentiation in Brassica oleracea. Genet.
501
Resour. Crop Evol. 2007, 54, 1717-1725.
502
(8) Mei, J.; Li, Q.; Yang, X.; Qian, L.; Liu, L.; Yin, J.; Frauen, M.; Li, J.; Qian, W.
503
Genomic relationships between wild and cultivated Brassica oleracea L. with emphasis
504
on the origination of cultivated crops. Genet. Resour. Crop Evol. 2010, 57, 687-692.
22 ACS Paragon Plus Environment
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Journal of Agricultural and Food Chemistry
505
(9) Ferioli, F.; Giambanelli, E.; D’Antuono, F.; Costa, H. S.; Albuquerque, T. G.; Silva,
506
A. S.; Hayran, O.; Kocaoglu, B. Comparison of leafy kale populations from Italy,
507
Portugal, and Turkey for their bioactive compound content: phenolics,
508
glucosinolates, carotenoids, and chlorophylls. J. Sci. Food Agric. 2013, 93, 3478-3489.
509
(10) MacLeod, A. J. Volatile flavour compounds of the Cruciferae. In The biology and
510
chemistry of the Cruciferae; Vaughan, J. G.; MacLeod, A. J.; Jones, B. M. G., Eds.;
511
Academic Press: London, UK, 1976; pp 307-330.
512
(11) Kjaer, A.; Skrydstrup, T. Selenoglucosinolates: Synthesis and Enzymatic
513
Hydrolysis. Acta Chem. Scand., Ser. B 1987, 41, 29-33.
514
(12) Fahey, J. W.; Zalcmann, A. T.; Talalay, P. The chemical diversity and distribution
515
of glucosinolates and isothiocyanates among plants. Phytochemistry 2001, 56, 5-51.
516
(13) Kushad, M. M.; Brown, A. F.; Kurilich, A. C.; Juvik, J. A.; Klein, B. P.; Wallig,
517
M. A.; Jeffery, E. H. Variation of Glucosinolates in Vegetable Crops of Brassica
518
oleracea. J. Agric. Food Chem. 1999, 47, 1541-1548.
519
(14) Verkerk, R.; Dekker, M.; Jongen, W. M. F. Glucosinolates: natural toxicants in
520
food. In Natural Toxicants in Food; Watson, D., Ed.; Academic Press: New York, USA,
521
1998; pp 29-53.
522
(15) Song, L.; Morrison, J. J.; Botting, N. P.; Thornalley, P. J. Analysis of
523
glucosinolates, isothiocyanates, and amine degradation products in vegetable extracts
524
and blood plasma by LC-MS/MS. Anal. Biochem. 2005, 347, 234-243.
525
(16) Devi, J. R.; Thangam, E. B. Extraction and separation of glucosinolates from
526
Brassica oleracea var. rubra. Adv. Biol. Res. 2010, 4 (6), 309-313.
527
(17) Beecher, C. W. W. Cancer preventive properties of varieties of Brassica oleracea:
528
a review. Am. J. Clin. Nutr. 1994, 59 (5), 1166 -1170. 23 ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 24 of 37
529
(18) Mithen, R.; Faulkner, K.; Magrath, R.; Rose, P.; Williamson, G.; Marquez, J.
530
Development of isothiocyanate-enriched broccoli, and its enhanced ability to induce
531
phase 2 detoxification enzymes in mammalian cells. Theor. Appl. Genet. 2003, 106,
532
727-734.
533
(19) Clarke, J. D.; Dashwood, R. H.; Ho, E. Multi-targeted prevention of cancer by
534
sulforaphane. Cancer Lett. 2008, 269, 291-304.
535
(20) Yoxall, V.; Kentish, P.; Coldham, N.; Kuhnert, N.; Sauer, M. J.; Ioannides, C.
536
Modulation of hepatic cytochromes P450 and phase II enzymes by dietary doses of
537
sulforaphane in rats: Implications for its chemopreventive activity. Int. J. Cancer 2005,
538
117, 356-362.
539
(21) Hanlon, N.; Coldham, N.; Gielbert, A.; Kuhnert, N.; Sauer, M. J.; King, L. J.;
540
Ioannides, C. The absolute bioavailability and dose dependent pharmacokinetic
541
behaviour of dietary doses of the chemopreventive isothiocyanate sulforaphane in rat.
542
Br. J. Nutr. 2008, 99, 559-564.
543
(22) Iori, R.; Bernardi, R.; Gueyrard, D.; Rollin, P.; Palmieri, S. Formation of
544
Glucoraphanin by Chemoselective Oxidation of Natural Glucoerucin: A
545
Chemoenzymatic Route to Sulforaphane. Bioorg. Med. Chem. Lett. 1999, 9, 1047-1048.
546
(23) van Doorn, H. E.; van der Kruk, G. C.; van Holst, G.-J.; Raaijmakers-Ruijs, N. C.
547
M. E.; Postma, E.; Groeneweg, B.; Jongen, W. H. F. The glucosinolates sinigrin and
548
progoitrin are important determinants for taste preferences and bitterness of Brussels
549
sprouts. J. Sci. Food Agric. 1998, 78, 30-38.
550
(24) Liu, Z.; Hirani, A. H.; McVetty, P. B. E.; Daayf, F.; Quiros, C. F.; Li, G. Reducing
551
progoitrin and enriching glucoraphanin in Brassica napus seeds through silencing of the
552
GSL-ALK gene family. Plant. Mol. Biol. 2012, 79, 179-189. 24 ACS Paragon Plus Environment
Page 25 of 37
Journal of Agricultural and Food Chemistry
553
(25) Nilsson, J.; Olsson, K.; Engqvist, G.; Ekvall, J.; Olsson, M.; Nyman, M.; Akesson,
554
B. Variation in the content of glucosinolates, hydroxycinnamic acids, carotenoids, total
555
antioxidant capacity and low-molecular-weight carbohydrates in Brassica vegetables. J.
556
Sci. Food Agric. 2006, 86, 528-538.
557
(26) Dalton-Morgan, J.; Hayward, A.; Alamery, S.; Tollenaere, R.; Mason, A. S.;
558
Campbell, E.; Patel, D.; Lorenc, M. T.; Yi, B.; Long, Y.; Meng, J.; Raman, R.; Raman,
559
H.; Lawley, C.; Edwards, D.; Batley, J. A high-throughput SNP array in the
560
amphidiploid species Brassica napus shows diversity in resistance genes. Funct. Integr.
561
Genomics 2014, 14 (4), 643-655.
562
(27) Semagn, K.; Babu, R.; Heame, S.; Olsen, M. Single nucleotide polymorphism
563
genotyping using Kompetitive Allele Specific PCR (KASP): overview of the
564
technology and its application in crop improvement. Mol. Breed. 2014, 33, 1-14.
565
(28) Song, L.; Thornalley, P. J. Effect of storage, processing and cooking on
566
glucosinolate content of Brassica vegetables. Food Chem. Toxicol. 2007, 45 (2), 216-
567
224.
568
(29) Mellon, F. A.; Bennett, R. N.; Holst, B.; Williamson, G. Intact Glucosinolate
569
Analysis in Plant Extracts by Programmed Cone Voltage Electrospray LC/MS:
570
Performance and Comparison with LC/MS/MS Methods. Anal. Biochem. 2002, 306, 83-
571
91.
572
(30) R Core Team. R: A Language and Environment for Statistical Computing. R
573
Foundation for Statistical Computing, Vienna, Austria; http://www.R-project.org
574
(accessed December 15, 2015).
575
(31) Kumpatla, S. P.; Buyyarapu, R.; Abdurakhmonov, I. Y.; Mammadov, J. A.
576
Genomics-Assisted Plant Breeding in the 21st Century: Technological Advances and 25 ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 26 of 37
577
Progress. In Plant Breeding; Abdurakhmonov, I., Ed.; InTech: Rijeka, Croatia, 2012; pp
578
131-184.
579
(32) LGC Genomics. KASP genotyping technology. LGC Limited, Teddington, UK;
580
http://www.lgcgroup.com/kasp/#.VOtBuCzKmkg (accessed December 15, 2015).
581
(33) He, C.; Holme, J.; Anthony, J. SNP Genotyping: The KASP Assay. Methods Mol.
582
Biol. 2014, 1145, 75-86.
583
(34) Ronquist, F.; Teslenko, M.; van der Mark, P.; Ayres, D. L.; Darling, A.; Höhna, S.;
584
Larget, B.; Liu, L.; Suchard, M. A.; Huelsenbeck, J. P. MRBAYES 3.2: Efficient
585
Bayesian phylogenetic inference and model selection across a large model space. Syst.
586
Biol. 2012, 61 (3), 539-542.
587
(35) Penny, D.; Hendy, M. D.; Holland, B. R. Phylogenetic Networks. In Handbook of
588
Statistical Genetics, Vol. 1; Balding, D. J.; Bishop, M.; Cannings, C., Ed.; Wiley & Sons:
589
Chichester, UK, 2008; 3rd ed., pp 520-523.
590
(36) Saitou, N.; Nei, M. The Neighbor-Joining method: a new method for
591
reconstruction of phylogenetic trees. Mol. Biol. Evol. 1987, 4, 406-425.
592
(37) Huson, D. H.; Bryant, D. Application of Phylogenetic Networks in Evolutionary
593
Studies. Mol. Biol. Evol. 2006, 23 (2), 254-267.
594
(38) Bryant, D.; Moulton, V. Neighbor-Net: An Agglomerative Method for the
595
Construction of Phylogenetic Networks. Mol. Biol. Evol. 2004, 21 (2), 255-265.
596
(39) Ciska, E.; Martyniak-Przybyszewska, B.; Kozlowska, H. Content of Glucosinolates
597
in Cruciferous Vegetables Grown at the Same Site for Two Years under Different
598
Climatic Conditions. J. Agric. Food Chem. 2000, 48, 2862-2867.
26 ACS Paragon Plus Environment
Page 27 of 37
Journal of Agricultural and Food Chemistry
599
(40) Kliebenstein, D. J.; Kroymann, J.; Brown, P.; Figuth, A.; Pedersen, D.;
600
Gershenzon, J.; Mitchell-Olds, T. Genetic Control of Natural Variation in Arabidopsis
601
Glucosinolate Accumulation. Plant Physiol. 2001, 126, 811-825.
602
(41) Mewis, I.; Tokuhisa, J. G.; Schultz, J. C.; Appel, H. M.; Ulrichs, C.; Gershenzon, J.
603
Gene expression and glucosinolate accumulation in Arabidopsis thaliana in response to
604
generalist and specialist herbivores of different feeding guilds and the role of defense
605
signaling pathways. Phytochemistry 2006, 67, 2450-2462.
606
(42) Falk, K. L.; Kästner, J.; Bodenhausen, N.; Schramm, K.M.; Paetz, C.; Vassao, D.
607
G.; Reichelt, M.; von Knorre, D.; Bergelson, J.; Erb, M.; Gershenzon, J.; Meldau, S.
608
The role of glucosinolates and the jasmonic acid pathway in resistance of Arabidopsis
609
thaliana against molluscan herbivores. Mol. Ecol. 2014, 23, 1188-1203.
610
(43) Cartea, M. E.; Velasco, P.; Obregon, S.; Padilla, G.; de Haro, A. Seasonal
611
Variation in Glucosinolate Content in Brassica oleracea Crops Grown in Northwestern
612
Spain. Phytochemistry 2008, 69 (2), 403-410.
613
(44) Mikkelsen, M. D.; Petersen, B. L.; Glawischnig, E.; Jensen, A. B.; Andreasson, E.;
614
Halkier, B. A. Modulation of CYP79 genes and glucosinolate profiles in Arabidopsis by
615
defense signaling pathways. Plant Physiol. 2003, 131, 298-308.
616
(45) Gladis, T.; Hammer, K. Nomenclatural notes on the Brassica oleracea-group.
617
Genet. Resour. Crop Evol. 2001, 48, 7-11.
618
(46) Huxley, A. J. The new Royal Horticultural Society dictionary of gardening;
619
Stockton Press: New York, USA, 1992.
620
(47) Velasco, P.; Francisco, M.; Moreno, D. A.; Ferreres, F.; Garcia-Viguera, C.;
621
Cartea, M. E. Phytochemical Fingerprinting of Vegetable Brassica oleracea and
27 ACS Paragon Plus Environment
Journal of Agricultural and Food Chemistry
Page 28 of 37
622
Brassica napus by Simultaneous Identification of Glucosinolates and Phenolics.
623
Phytochem. Anal. 2011, 22, 144-152.
624
(48) Carlson, D. G.; Daxenbichler, M. E.; VanEtten, C. H.; Kwolek, W. F.; Williams, P.
625
H. Glucosinolates in Crucifer Vegetables: Broccoli, Brussels Sprouts, Cauliflower,
626
Collards, Kale, Mustard Greens, and Kohlrabi. J. Am. Soc. Hortic. Sci. 1987, 112 (1),
627
173-178.
628
(49) Yang, B.; Quiros, C. F. Survey of glucosinolate variation in leaves of Brassica
629
rapa crops. Genet. Resour. Crop Evol. 2010, 57, 1079-1089.
630
(50) Kang, J. Y.; Ibrahim, K. E.; Juvik, J. A.; Kim, D. H.; Kang, W. J. Genetic and
631
Environmental Variation of Glucosinolate Content in Chinese Cabbage. Hortic. Sci.
632
2006, 41 (6), 1382-1385.
633
(51) Fahey, J. W.; Stephenson, K. K.; Talalay, P. Glucosinolates, myrosinase, and
634
isothiocyanates: three reasons for eating Brassica vegetables. ACS Symp. Ser. 1998,
635
701, 16-22.
636
(52) The Royal Society of Chemistry. ChemSpider. Chemical structure database.
637
Burlington House, London; http://www.chemspider.com/ (accessed December 15,
638
2015).
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Figure captions
Figure 1. Chemical structures of glucosinolates quantified. The structures were obtained by using ChemDraw software (v15.0.0.106, PerkinElmer Informatics, Massachusetts, USA).
Figure 2. Glucosinolate content (mg/100g FW) of different kale and cabbage varieties. Two individual plants per variety were measured (black and grey bars). Note the different scales.
Figure 3. Differences in glucosinolate content (mg/100g FW) between the groups of kale and cabbage varieties: (A) gluconapin content, (B) progoitrin content, (C) glucoraphanin content, (D) gluconasturtiin content, (E) glucobrassicin content. Note the different scales. Different letters above each boxplot indicate significant differences in a post-hoc Tukey’s HSD test (p < 0.05).
Figure 4. Neighbor-Net of different kale and cabbage varieties based on the KASPanalysis. Sample names are color coded according to their origin. Numbers beside branches are Bayesian posterior probabilities (support >70) for the respective clade. Leaf margin curliness of the varieties is indicated.
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Tables
Table 1. The Glucosinolates Analyzed In This Study, Listed With Their Relevant Characteristics. Molecular Formulas Were Obtained From The Royal Society Of Chemistry52. group
gluconapin
m/z experimental [M-H] 372.0399
m/z theoretical [M-H] 372.0418
error [ppm] 4.9
molecular formula C11 H19 N1 O9 S2
retention time [min] 7.0
progoitrin
388.0368
388.0366
2.5
C11 H19 N1 O10 S2
4.4
glucoraphanin
436.0396
436.0400
3.5
C12 H23 N1 O10 S3
4.3
aromatic
gluconasturtiin
422.0578
422.0574
1.7
C15 H21 N1 O9 S2
17.0
indole
glucobrassicin
447.0496
447.0537
2.6
C16 H20 N2 O9 S2
15.8
aliphatic
trivial name
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Table 2. Summary Of The Kale And Cabbage Varieties Used In This Study. The Assignment To The Analyses Is Displayed As Well As The Origin Of The Seeds (e.g., Company The Varieties Have Been Obtained From). included in glucosinolate analysis
variety
non-kale cabbage cultivars
local Northern German kale
American varieties
Italian varieties
German kale varieties (B. oleracea convar. acephala var. sabellica)
Lerchenzungen
x
Vitessa
included in phylogenetic analyses x x
Vitessa
x
Lage Fijngekrulde
x
Niedriger Grüner Krauser
x
Reflex F1
x
x
Redbor F1
x
x
Frostara
x
x
Winnetou F1
x
x
Flower-Sprout "Petit Posy Mix" (Brussels sprouts × kale) Black Tuscany
x
x
x
x
Palmizio Senza Testa
x
x
Negro Romano
x
x
Georgia Southern
x
x
Morris Heading
x
x
Champion
x
x
Vates
x
x
Buss Bunde
x
x
Niedriger von Rosenweide
x
x
Rote Palme
x
x
Rote Palme Holterfehn
x
x
Schatteburg
x
x
Jellen
x
x
Neuefehn Hainwatjes
x
x
Lammertsfehn
x
x
Diepholzer Dickstrunk
x
x
Red cabbage "Roodkop" B. oleracea convar. capitata var. rubra Savoy "Vertas 2" B. oleracea convar. capitata var. sabauda Butter cabbage B. oleracea var. costata Kohlrabi "Delikateß blauer" (blue) B. oleracea convar. acephala var. gongylodes Romanesco broccoli B. oleracea convar. botrytis var. botrytis Brussels sprouts "Hilds Ideal" B. oleracea convar. gemmifera var. gemmifera Marrow-stem kale "Westfälischer Furchenkohl" B. oleracea convar. acephala var. medullosa Marrow-stem kale "Walking Stick" B. oleracea convar. acephala var. medullosa Galician cabbage B. oleracea convar. acephala Wild cabbage „Helgoländer“ B. oleracea L. Siberian kale B. napus ssp. pabularia
x x x x x x x
x
x
x
x
x
x
x
x
x
seed origin Kiepenkerl, Bruno Nebelung GmbH, Everswinkel, Germany N.L.Chrestensen Erfurter Samen- und Pflanzenzucht GmbH, Erfurt, Germany Centrala Nasienna, Saatbau Polska Sp. z o.o., Środa Śląska, Poland N.L.Chrestensen Erfurter Samen- und Pflanzenzucht GmbH, Erfurt, Germany PNOS (Polskie Nasiennictwo Ogrodnictwo Szkółkarstwo Sp. z o.o.), Ożarów Mazowiecki, Poland Dürr Samen S. Schwenk e.K., Reutlingen, Germany Kiepenkerl, Bruno Nebelung GmbH, Everswinkel, Germany Kiepenkerl, Bruno Nebelung GmbH, Everswinkel, Germany Kiepenkerl, Bruno Nebelung GmbH, Everswinkel, Germany Gärtner Pötschke GmbH, Kaarst, Germany Thompson & Morgan (UK) Ltd., Ipswich, UK Thompson & Morgan (UK) Ltd., Ipswich, UK Reinhard Lühring, private farmer, Rhauderfehn, Germany
Sustainable Seed Company, Covelo CA, USA
Reinhard Lühring, private farmer, Rhauderfehn, Germany
Gartenland GmbH Aschersleben, Essen, Germany toom, Centor-Warenhandels-GmbH, Köln, Germany Magic Garden Seeds, Andreas Fái-Pozsár, Regensburg, Germany N.L.Chrestensen Erfurter Samen- und Pflanzenzucht GmbH, Erfurt, Germany Magic Garden Seeds, Andreas Fái-Pozsár, Regensburg, Germany toom, Centor-Warenhandels-GmbH, Köln, Germany Kiepenkerl, Bruno Nebelung GmbH, Everswinkel, Germany Thompson & Morgan (UK) Ltd., Ipswich, UK Reinhard Lühring, private farmer, Rhauderfehn, Germany Botanical Garden of the University of Oldenburg, Oldenburg, Germany Exotic-Samen Wolfgang Meier, Fürstenwalde, Germany
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Table 3. Parameters For Calibration Curves: Slope, Axis Intercept, Pearson Correlation Coefficient R2, As Well As Relative Standard Deviation Of Analytical Repeat Injections (RSD) And Signal-To-Noise Ratio (S/N) Of The Five Glucosinolate Standards. glucosinolate
slope
axis intercept
gluconapin progoitrin glucoraphanin gluconasturtiin glucobrassicin
0.0012 0.0006 0.0039 0.0005 0.0012
-0.1089 -0.3175 0.0663 -0.0386 0.1321
coefficient of determination R2 0.9998 0.9980 0.9998 0.9999 1.0
RSD (%)
S/N
3.97 3.01 4.16 4.37 3.23
45 230 45 195 55
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Figure graphics
Figure 1:
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Figure 2:
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Figure 3:
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Figure 4:
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Graphic for table of contents
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