Mechanism of action of coenzyme B12. Hydrogen transfer in the

Soc. , 1969, 91 (6), pp 1498–1507. DOI: 10.1021/ja01034a037. Publication Date: March 1969 ... Israel Fernández , Fernando P. Cossío and Miguel A. ...
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Mechanism of Action of Coenzyme BIZ. Hydrogen Transfer in the Isomerization of Methylmalonyl Coenzyme A to Succinyl Coenzyme A William W. Miller and John H. Richards Contribution No. 3736 from the Gates and Crellin Laboratories of Chemistry, California Institute of Technology, Pasadena, California 91109. Received August 19, 1968

Abstract: The fate of the hydrogen atom that migrates during the isomerization of methylmalonyl coenzyme A to succinyl coenzyme A catalyzed by methylmalonyl coenzyme A isomerase, an enzyme which requires coenzyme Blz as a cofactor, has been studied by a method which follows the statistical partitioning of deuterium between substrate and product and compares the observed distribution to distributions calculated on the basis of various mechanistic models. The method is described, and the results of its application to the methylmalonyl coenzyme A mutase reaction lead to the conclusion that the hydrogen removed from methylmalonyl coenzyme A (which we find to be the rate-determining step in the over-all conversion) becomes one of three equivalent hydrogens before a hydrogen is returned to regenerate methylmalonyl coenzyme A or to yield succinyl coenzyme A. The implications of these results are discussed in terms of involvement of the bond between C-5 ' of the deoxyadenosine residue and the cobalt atom of the coenzyme B12.

T

he cobalt-containing coenzyme Blz (d-dimethylbenzimidazolyl-Co-5'-deoxyadenosylcobamide)has been shown to be a cofactor in at least three rearrangement processes in which hydrogen atoms and other groups undergo 1,2 migrations: dehydration of propanediol to propionaldehyde1S2(eq I), isomerization of glutamic acid to fl-methyl aspartic acid3 (eq 2), and isomerization of methylmalonyl coenzyme A to succinyl coenzyme A4+ (eq 3). These three reactions have CH,CHOHCH?OH

--j

CH,CH,CHO

COOH

COOH

CHNH2

CHNH2

CH,

CHCH,

I

(1)

I I

I 1 CH2 I COOH

I

('2)

COOH

COSCoA

/coScoA CHICH

I 1 -

CH,

(4)

coenzyme A has shown that the R group (in this case -COSCoA) is transferred intramolecularIy.8-'0 Furthermore, the hydrogen which is transferred does not exchange with the hydrogens of water during the isomerization of methylmalonyl coenzyme A, l 1 - I 3 of glutamate, l 4 or during the dehydration of propanediol. The stereochemistry of the hydrogen migration is known in all three cases. Inversion of configuration is observed at that carbon to which hydrogen migrates for propanediol dehydration'j, l 6 and also for glutamate isomerization. l7 In contrast, the hydrogen which migrates from the methyl group of methymalonyl coenzyme A to C-3 of succinyl coenzyme A occupies the same steric location as was previously occupied by the -COSCoA group; in this case migration occurs with retention of configuration. l8

(3)

CH2 'COOH

I

COOH

several features in common which can be summarized (eq 4). Work on the isomerization of methylmalonyl (1) A. M. Brownstein and R . H. Abeles, J . Biol. Chem., 236, 1199 (1961). (2) H. A . Lee, Jr., and R . H. Abeles, ibid., 238, 2367 (1963). (3) H. A . Barker, H. Weissbach, and R . D. Smyth, Proc. Natl. Acad. Sci. U . S . , 44, 1093 (1958). (4) R . M . Smith and I