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Recombinant Tyrosinase from Polyporus arcularius: Overproduction in Escherichia coli, Characterization and Use in a Study of Aurones as Tyrosinase Effectors Eva Marková, Michael Kotik, Alena Krenkova, Petr Man, Romain Haudecoeur, Ahcene Boumendjel, Renaud Hardre, Yasmina Mekmouche, Elise Courvoisier-Dezord, Marius Réglier, and Ludmila Martinkova J. Agric. Food Chem., Just Accepted Manuscript • DOI: 10.1021/acs.jafc.6b00286 • Publication Date (Web): 10 Mar 2016 Downloaded from http://pubs.acs.org on March 16, 2016
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Recombinant Tyrosinase from Polyporus arcularius: Overproduction in
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Escherichia coli, Characterization and Use in a Study of Aurones as
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Tyrosinase Effectors
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Eva Marková†,‡, Michael Kotik†, Alena Křenková†, Petr Man†, Romain Haudecoeur&, Ahcène
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Boumendjel&, Renaud Hardré#, Yasmina Mekmouche#, Elise Courvoisier-Dezord#, Marius
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Réglier#, Ludmila Martínková†*
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†
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Czech Republic
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‡
Institute of Microbiology, Czech Academy of Sciences, Vídeňská 1083, 142 20 Prague,
Department of Biochemistry and Microbiology, Faculty of Food and Biochemical
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Technology, University of Chemistry and Technology Prague, Technická 3, 166 28 Prague,
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Czech Republic
12
&
13
#
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France
Université Grenoble Alpes, CNRS, DPM UMR 5063, 38041, Grenoble, France
Aix Marseille Université, Centrale Marseille, CNRS, ISm2 UMR 7313, 13397, Marseille,
15 16
*Corresponding
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[email protected] author.
Phone:
420-29644-2569.
Fax:
420-29644-2509.
E-mail:
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Abstract: Tyrosinases act in development of organoleptic properties of tea, raisins etc., but
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also cause unwanted browning of fruits, vegetables and mushrooms. The tyrosinase from
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Agaricus bisporus has been used as a model to study tyrosinase inhibitors which are also
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indispensable in the treatment of skin pigmentation disorders. However, this model has
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disadvantages such as side enzyme activities and presence of multiple isoenzymes. Therefore,
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we aimed to introduce a new tyrosinase model. The pro-tyrosinase from Polyporus arcularius
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was overproduced in Escherichia coli. Trypsin digestion led to a cleavage after R388 and
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hence enzyme activation. The tyrosinase was a homodimer and transformed L-DOPA and
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tert-butylcatechol preferentially. Various aurons were examined as effectors of this enzyme.
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2’- and 3’-Hydroxyaurones acted as its activators and 2’,4’-dihydroxyaurone as an inhibitor,
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while 4’-hydroxyaurones were its substrates. The enzyme is a promising model for tyrosinase
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effector studies, being a single isoenzyme and void of side enzyme activities.
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Keywords: tyrosinase, Polyporus arcularius, Escherichia coli, trypsin digestion, aurones
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INTRODUCTION
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Tyrosinases (EC 1.14.18.1) are dinuclear copper oxidases acting on phenolic compounds.
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They catalyze the monooxygenation of monophenols, which is referred to as phenolase or
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monooxygenase activity, and the oxidation of 1,2-diphenols (catechols), which is catecholase
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or oxidase activity.1 Tyrosinases attract much attention because of their roles in skin
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pigmentation and pigmentation disorders in mammals and in browning of some agricultural
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products. The latter processes are desirable in fermented tea, cocoa or raisins, but unwanted in
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some fruits, vegetables and mushrooms, where they occur during senescence or their
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inappropriate handling after harvest.2 Thus a number of studies focused on tyrosinase
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inhibitors as antibrowning agents for food industry and as drugs and cosmetics additives for
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the treatment of hyperpigmentation.2-4 Tyrosinase applications in biodegradation,5-8
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biotransformation,9,10 biopolymer grafting and cross-linking11-15 and in biosensors16-17 were
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also examined. The uses of fungal and bacterial tyrosinases in these areas were reviewed
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previously.18-20
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The tyrosinase from Agaricus bisporus (common button mushroom) is readily available at
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a low cost and has been thus used in the majority of the aforementioned studies. However, the
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testing of potential tyrosinase inhibitors and antibrowning agents is not fully reliable with this
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model, as it may contain several isoenzymes in differing ratios and various contaminants
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(glycosidases, laccases, peroxidases, lectins, phenolic compounds).20 For this purpose,
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recombinant fungal tyrosinases containing single isoenzymes and void of these contaminants
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will therefore be more promising.
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Plenty of putative tyrosinases and tyrosinase-like enzymes are encoded in fungal
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genomes21 but few of them were studied at the protein level.21-24 Effective heterologous
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expression systems are necessary to exploit this resource. One option is the production of the
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latent tyrosinase form, its purification and its subsequent activation. Possible toxic effects of
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the active enzyme on the host, as well as browning or protein precipitation during the enzyme
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purification can be thus avoided.25 In this way, the tyrosinases from Aspergillus oryzae and
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Pholiota microspora (previously named Pholiota nameko) were produced in E. coli,26,27 but
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the activity yields were not reported.
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The aim of this work was to introduce a new model of a eukaryotic tyrosinase for
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tyrosinase effector studies. To this end, the tyrosinase from the edible mushroom Polyporus
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arcularius was selected. The corresponding gene and its light-regulated expression was
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characterized in the fungus,28 but the properties of the protein product were unknown. Here
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the protein was overproduced in E. coli, characterized and used to study the effects of natural
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flavonoid aurones (benzylidenebenzofuran-3(2H)-one) and their derivatives on the tyrosinase
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activity. Their effects were also previously tested with the tyrosinases from A. bisporus and
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Streptomyces antibioticus. In those studies, some of them proved to be powerful tyrosinase
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inhibitors, but others were tyrosinase activators or substrates, depending on their
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hydroxylation pattern.29,30 Here, the previously described effects of aurones were compared
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with those on the new tyrosinase from P. arcularius.
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MATERIALS AND METHODS Chemicals. Aurones (Figure 1) were prepared as described previously.29,30 Other chemicals were purchased from standard sources.
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Sequence analyses and DNA manipulations. Database searches and sequence
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alignments were made using the programs BLAST (http://blast.ncbi.nlm.nih.gov/Blast.cgi)
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and Clustal W2 (http://www.ebi.ac.uk/Tools/msa/clustalw2/), respectively. The synthetic gene
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coding the pro-tyrosinase from P. arcularius HHB13444 (UniProt accession no. Q65Z70)
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was designed in two parts without codon optimization, and purchased from Generay Biotech
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Co. (Shanghai, China) and GenScript USA Inc., respectively, as pET28a-based constructs.
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The major N-terminal part of the gene encoding a 429-residue protein with an N-terminal His-
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tag (1179 bp, its Kpn I restriction site eliminated) was obtained in pET28a under the control
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of the T7 promoter (termed pET28ParcN). The C-terminal domain-encoding part of the gene
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(702 bp) was received on a separate plasmid (pParcC) and was PCR-amplified using a
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PfuUltra II Fusion HS DNA polymerase (Agilent Technologies), the primers ParcC-F (5′-
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CCACTTGCCGTCAATCTGGCAAGCG-3′)
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GATGGTACCCTACTAGGTAACCTGAAGGGAAGCAACGTG-3′, the Kpn I restriction
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site being underlined), and pParcC as a template. Linearization of pET28ParcN was
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accomplished by PCR using a Phusion DNA polymerase (Thermo Scientific), and the primers
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ParcVec-F
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ParcVec-R
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G-3′, the Kpn I restriction site being underlined). The PCR products were gel-purified, 5′-
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phosphorylated with T4 polynucleotide kinase (New England BioLabs), and restricted with
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Kpn I. After purification using a High Pure PCR Product purification kit (Roche), the
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restricted PCR products were ligated using a DNA ligation kit (TaKaRa Bio Inc.). The
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ligation mixture was subsequently transformed into E. coli TOP10 cells (Life Technologies).
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Plasmids from eight colonies were isolated, and the correct gene assembly was verified by
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restriction analysis. The correctly assembled pro-tyrosinase-encoding gene in pET28a was
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fully sequenced. The resulting plasmid carrying the gene coding for the pro-tyrosinase from
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P. arcularius was designated pET28ParcP.
and
ParcC-R
(5′-GAACGCGGATCGCGCCCGGGAGCCGCCATAGAACTTG-3′)
(5′-
and
(5′-GTTGGTACCGCGGCCGCACTCGAGCACCACCACCACCACCACTGA
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Gene expression. Competent E. coli BL21(DE3) cells (Life Technologies) were co-
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transformed with plasmid pET28ParcP and pGro7, which is included in the Chaperone
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Plasmid kit from Takara Bio Inc. The cells were grown in 500-mL Erlenmeyer flasks
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containing 100 mL of LB medium supplemented with 0.2 mM CuSO4, kanamycin (50 µg
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mL-1) and chloramphenicol (34 µg mL-1) for 3 h at 37 °C with shaking (220 rpm). Inducers of
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the expression of tyrosinase and GroEL/ES chaperones (0.02 mM isopropyl-β-D-1-
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thiogalactopyranoside (IPTG) and 11.3 mM L-arabinose, respectively) were then added and
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the cultivation temperature reduced to 20 °C. After a further 24-h cultivation, the cells were
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harvested by centrifugation (30 min, 4 °C) and stored at -80 °C until use.
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Enzyme extraction and affinity chromatography. The harvested biomass was
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resuspended in binding buffer (20 mM sodium phosphate, 500 mM NaCl, 20 mM imidazole,
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pH 7.4). Lysozyme and DNAse were added to final concentrations of 200 and 20 µg mL-1,
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respectively, and MgCl2 and PMSF to 1 mM each. The resulting slurry was incubated on ice
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for 30 min and then sonicated on ice (Ultrasonic Homogenizer 4710 Series, Cole – Parmer,
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USA; power output at 40%, 15 x 1 min). The crude extract was centrifuged (16,800 g, 20 min,
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4 °C) and analyzed by SDS-PAGE. The supernatant was loaded onto 1-mL HisTrap FF
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column (GE Healthcare). The pro-tyrosinase was eluted (1 mL min-1) with a linear gradient
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(30 min) of 20-500 mM imidazole in 20 mM sodium phosphate, 500 mM NaCl, pH 7.4.
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Fractions containing pro-tyrosinase were identified by SDS-PAGE and pooled.
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Proteolytic digestion. The reaction mixture (total volume 1 mL) contained ca. 1 mg of
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the pro-tyrosinase purified by affinity chromatography, 0.1 mg of trypsin (Sigma) and the
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elution buffer (see above). The reaction proceeded at 25 °C with shaking (Thermomixer
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Eppendorf; 800 rpm) and was terminated after 15 min by adding 2 mM PMSF. Alternatively,
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trypsin was replaced with α-chymotrypsin (0.1 mg; Sigma) and the reaction was carried out
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under the same conditions.
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Size-exclusion chromatography. The molecular mass of the tyrosinase was assessed by
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size-exclusion chromatography using a Superdex 200 10/300 GL column (GE Healthcare)
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with a flow rate of 0.4 mL min-1. The mobile phase was 50 mM Tris/HCl, 150 mM NaCl (pH
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7.2). The calibration proteins were cytochrome c, carbonic anhydrase, albumin, alcohol
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dehydrogenase and β-amylase.
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Spectrophotometric activity assays. Tyrosinase activities for L-tyrosine, L-DOPA, TBC
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and p-cresol were determined according to previously described methods (slightly
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modified).31-33 The reaction mixtures (total volume 1 mL) contained 1 mM substrate, an
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appropriate amount of the protein and 100 mM citrate buffer (pH 5.5). The reactions
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proceeded at 50 °C for up to 10 min without shaking. The reaction products of TBC and p-
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cresol were quantified at 400 nm (ε400 nm = 1,200 M-1 cm-1 and 1,433 M-1 cm-1, respectively)
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and those of L-tyrosine and L-DOPA at 475 nm (ε475 nm = 3,400 M-1 cm-1).21,32,34 The increase
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in absorbance was monitored continuously and the activities were calculated from the linear
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part of the reaction. The pH and temperature optima and temperature stability were
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determined in the same way using L-DOPA as the substrate. Enzyme kinetics were
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determined in microtitration plates (reaction volume 0.2 mL) at pH 6.0 (phosphate buffer) and
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30 °C using 0.02 – 2 mM of L-DOPA. The same method was used to determine the effects of
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aurones (0.003 − 0.5 mM) on the enzyme activity for L-DOPA (1 mM) in the presence of 1 %
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(v/v) dimethylsulfoxide. The inhibition of the enzyme by compound 1b was determined with
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15.625-2000 µM - 2 mM of L-DOPA. The activities of the tyrosinase for its aurone substrates
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2b and 3c were determined in the same way but without L-DOPA, and the decrease in
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substrate concentrations was quantified at 400 nm as described previously.30
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Activity assay by HPLC. Tyrosinase activity for phenol was determined in reaction
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mixtures containing 1 mM of the substrate, 100 mM citrate buffer (pH 5.5), and an
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appropriate amount of protein. The reactions proceeded at 50 °C for 2 - 20 min with shaking
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(thermomixer; 800 rpm) and were terminated by adding 0.2 M HCl. After centrifuging the
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samples, the concentration of phenol in the supernatants was determined by HPLC (column
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Chromolith Speedrod RP18 (Merck), mobile phase 20% acetonitrile with 0.1% H3PO4, flow
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rate 2 mL min-1). Activities for o-, and m-cresol were examined in an analogous way.
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Mass spectrometry. The protein was cut out of the SDS polyacrylamide gel, destained
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and reduced (30 mM Tris-(2-carboxyethyl)phosphine, 90°C, 30 min). After alkylation of
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cysteines with 30 mM iodoacetamide for 45 min and digestion with trypsin (Trypsin Gold,
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Promega; 37°C), the peptides thus obtained were analyzed using an ApexQe 9.4T instrument
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with MALDI source (Bruker Daltonics). MMass software (www.mmass.org)35 was used to
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interpret the spectra. Intact monoisotopic mass of the protein was obtained by direct infusion
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to ESI-FT-ICR MS after protein desalting on a protein microtrap (Optimize Technologies).
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Data were processed in DataAnalysis 4.1 (Bruker Daltonics). Alternatively, the protein was
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treated with 30 mM TCEP for 10 min at 75 °C prior to desalting. Fragmentation of the protein
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was done using collision-induced dissociation in the quadrupole. For a detailed sequence
167
characterization and localization of modifications, the protein was analyzed using the system
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described elsewhere.36 Briefly, the protein was dissolved in 0.5 M glycine HCl buffer pH 2.3
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containing 4 M urea, and injected into an HPLC system consisting of an immobilized pepsin
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column, reversed-phase trap column and analytical column connected to the ESI source of
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FT-ICR MS. Data were acquired in LC-MS/MS mode and tandem mass spectra were
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searched using the MASCOT algorithm against the sequence of the tyrosinase.
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RESULTS
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Pro-tyrosinase overproduction and partial purification by affinity chromatography.
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The rationale behind designing the pro-tyrosinase gene in two parts (see Materials and
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methods) was to compare the expression of the genes coding the entire pro-tyrosinase on one
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hand, and only its active part (lacking the C-terminal region) on the other. However, no
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activity was detected in the latter option, although a protein with an apparent molecular
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weight of ca. 45 kDa (close to the expected ca. 47 kDa) was produced (Supporting
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information; Figure S1). The codon frequency was not optimized to avoid translation rate
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being too high which may lead to misfolding.37 Expression of the total pro-tyrosinase gene
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also gave a protein of the expected size (ca. 68 kDa). Variations in cultivation temperature
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(15, 20 or 25 °C after induction) and in IPTG and CuSO4 concentrations (both 0.02 mM, 0.2
185
mM or 1 mM) were examined to increase the yield of the soluble enzyme further (data not
186
shown). Each parameter optimum found was used in subsequent testing. As a result, the
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highest amount of the soluble protein was obtained with 0.02 mM IPTG, 0.2 mM CuSO4, at a
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cultivation temperature of 20 °C. The pro-tyrosinase was partially purified by Ni affinity
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chromatography (Figure 2, lane 3) of the cell extracts to give ca. 54 mg of protein L-1 of the
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culture medium. This protein sample also contained the chaperones, which were produced by
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this expression system and co-purified with the pro-tyrosinase as indicated by SDS-PAGE
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showing a band corresponding in size to the GroEL subunit (ca. 60 kDa; Figure 2, lane 2-3).
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Tyrosinase activation and gel filtration. A subsequent treatment of the partially purified
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pro-tyrosinase by trypsin or α-chymotrypsin gave active tyrosinase. A specific activity ca.
195
25% higher was obtained with trypsin (Fig. S2). The trypsin digestion was therefore used in
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the subsequent work. This also led to a marked reduction in the molecular size of the protein
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(from ca. 68 kDa to ca. 43 kDa; Figure 2, lane 4). The enzyme obtained in this way lost its
198
ability to bind to the Ni affinity column, suggesting cleavage of the His-tag. At the same time,
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the band of GroEL almost disappeared in the electrophoreogram (Figure 2, lanes 4-5). GroEL
200
contains multiple target sites for trypsin and it was thus probably digested into low-molecular-
201
weight peptides. The active tyrosinase was separated by size-exclusion chromatography,
202
which confirmed that it was the prevailing protein species in this sample. One of the minor
203
protein components probably corresponded to trypsin, as judged from its molecular weight of
204
ca. 23 kDa (Supporting information; Figure S2). The amount of the protein thus obtained was
205
ca. 30 mg of protein L-1 of the culture medium. The activity yield was ca. 3,800 U L-1 of the
206
culture medium for L-DOPA as the substrate (9,000 U L-1 for TBC). The molecular mass of
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the active tyrosinase was determined by size-exclusion chromatography to be 79.4 kDa,
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which was in relatively close agreement with the molecular mass of a dimer of two N-
209
terminal fragments devoid of their His-tags (~86 kDa).
210
Mass spectrum analyses of the purified tyrosinase. Further examination of the protein
211
was done by peptide mapping, and revealed that the trypsin-catalyzed cleavage probably
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produced a protein product delimited by sequences GSEFMSH- at the N-terminus and -
213
KRYGGSR at the C-terminus. The final product is thus most likely composed of 392 aa
214
residues and ends with R388. The recombinant protein probably also contained four aa
215
residues from the region following the N-terminal His6-tag, and was thus composed of 392 aa
216
residues (Supporting information; Figure S3). The two copper-coordinating sites were
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predicted, which consist of three His-residues each and are conserved among tyrosinases
218
(ibid.). The molecular weight calculated for this protein (ca. 43.1 kDa) corresponded to that
219
determined by SDS-PAGE (ca. 43 kDa; Figure 2). To further confirm these findings, the
220
protein was subjected to intact mass measurement using FT-ICR MS. The measured
221
monoisotopic mass of 43090.025 Da was close to the expected calculated value for the active
222
tyrosinase (43092.116) but the mass error of 2 Da was too high for FT-MS measurement
223
(typically, accuracies in the ppm range are obtained). Since the protein reduction using TCEP
224
had no effect, we ruled out the presence of a disulphide bond. In addition, the MS/MS
225
analysis of the intact protein verified that the activated recombinant tyrosinase starts with the
226
sequence GSEFMSH- and ends with -KFYGGSR and that there are no modifications in the
227
71 N-terminal and 70 C-terminal amino acids. Therefore we considered the presence of a Cys-
228
His thioether bond, previously described in tyrosinases,38,39 as a possible explanation. Next,
229
we attempted to find experimental proof of this hypothesis. The protein was injected into an
230
immobilized pepsin column and the resulting peptides separated by a reversed-phase HPLC
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with subsequent MS/MS analysis. Using this approach, we localized the thioether connection
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between C85 and H87 present in the sequence -GYCTHG-.
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Characterization of the purified tyrosinase. The substrate range of the purified
234
tyrosinase was determined at a fixed substrate concentration (1 mM). The enzyme accepted
235
TBC, L-DOPA, p-cresol, phenol and L-tyrosine as its substrates with the relative activities of
236
100%, 42%, 37%, 4% and 1%, respectively; o- and m-cresol were not substrates. The relative
237
activities must be evaluated with some caution, the substrate concentrations not being
238
optimized. The Km was then determined for L-DOPA and shown to be relatively high (1.04 ±
239
0.08 mM). The enzyme exhibited kcat of 223 ± 8 s-1 for this substrate (Table 2; Supporting
240
information; Figure S4). The enzyme was active between pH 4 and 9, and exhibited more
241
than 60% of its maximum activity (found at pH 5.5) between pH 5 and 6 (Supporting
242
information; Figure S5). The enzyme exhibited its optimum activity at 50 °C, and retained 65
243
% of its maximum activity at 70 °C. It was unstable at temperatures over 55 °C (Supporting
244
information; Figure S6).
245
Effects of aurones on tyrosinase activity. Several aurones, some of which were
246
previously shown to differ in their behaviour towards the fungal tyrosinase from A. bisporus
247
and the bacterial tyrosinase from Streptomyces antiobioticus,30 were used for testing with the
248
tyrosinase from P. arcularius. In the previous study, compound 1b with a 2,4-disubstituted B-
249
ring (i.e. with a resorcinol moiety) was found to be a strong inhibitor of both fungal and
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bacterial tyrosinase. Compounds 2a and 3b with a monosubstituted B-ring (substituted in
251
ortho- or meta-positions) were inhibitors of the bacterial enzyme, but activators of the fungal
252
one. Compounds 2b and 3c containing a para-substituted B-ring were substrates of both
253
enzymes, and compounds 1a and 3a with an unsubstituted B-ring did not exhibit any effect on
254
the enzymes. Both fungal tyrosinases (from A. bisporus and P. arcularius) exhibited the same
255
type of behaviour towards all the previously tested compounds, but differed in their Km or
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IC50 towards each of their substrates or inhibitors, respectively (Table 1; Supporting
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information; Figures S7-S10). The values of both of these constants were generally higher for
258
the tyrosinase from P. arcularius, while those of the bacterial tyrosinase were the lowest
259
(except for compound 2b). The inhibition data of compound 1b were analyzed with the
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program EZ-FIT.40 Based on the criteria describing the goodness-of-fit (standard errors,
261
Student t test, identifications of outlining data, and Akaike information criterion test), the
262
inhibition data best fitted the mixed inhibition model (Ki1 = 7 ± 1 µM, Ki2 = 27 ± 12 µM)
263
(Supporting information; Figures S11-12).
264 265
DISCUSSION
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Recombinant tyrosinases from bacteria6,16,41-43, fungi21,23,24,26,27,33,44,45 and humans46,47 were
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previously produced in differing yields and purities. In the fungal tyrosinases, C-terminal
268
proteolytic processing is required for its activity.48 The strategies for the expression of fungal
269
tyrosinase genes used either Pichia pastoris23 or some non-standard hosts such as Aspergillus
270
niger,45 Saccharomyces cerevisiae33 or Trichoderma reesei,23 which produced the enzymes in
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their active forms. However, significant yields per 1 L of cell culture were only reported for
272
P. pastoris (ca. 24 mg of protein and 1,200 U) and A. niger (ca. 20 mg of protein and 1,668
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U) producing the tyrosinases from T. reesei and P. sanguineus, respectively.24,45
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In this work, a tyrosinase was produced in its latent form in E. coli and activated in vitro.
275
Previously, a pro-tyrosinase from P. microspora was produced in this host as a thioredoxin
276
fusion protein to improve its solubility,27 but the protein and activity yields have not been
277
reported. In our study, the yield (ca. 30 mg of the activated enzyme and ca. 3,800 U per 1 L of
278
the culture medium) was ca. 2-3 fold higher than for the two tyrosinases expressed in A. niger
279
or P. pastoris (see above). Thus the new tyrosinase was obtained in sufficient amounts to
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determine its substrate specificity and to use it as a model for testing potential tyrosinase
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effectors.
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The activation process, which removed the active site protection48,49, was studied in both
283
wild-type and recombinant producers of tyrosinases (Table S1). In almost all of these
284
enzymes, the proteolytic cleavage was found in the linker region between the C- and N-
285
terminal domains (ca. 26-31 aa residues downstream of the conserved Y(F)-X-Y motif21;
286
supplementary Figure S13). For instance, the C-terminal aa residue was identified in the
287
crystallized PPO3 and PPO4 tyrosinases from A. bisporus to be G392 and S383,
288
respectively.38,39 The C-terminal aa residue of the purified active tyrosinase in N. crassa was
289
F408.50 The proteolytic cleavage of the fungal pro-tyrosinases also proceeded in their
290
recombinant eukaryotic hosts in the corresponding regions.23,24,44,45 However, the tyrosinase
291
from Trichoderma reesei was cleaved at a different site when produced in Pichia pastoris
292
(R407) compared to the native host (G400).24 This could be one of the reasons for their
293
different pH profiles and slightly different specific activities. E. coli produced the latent forms
294
of tyrosinases, and it was thus necessary to cleave the enzymes in vitro. The enzyme from P.
295
microspora was probably processed after F387 by α-chymotrypsin, i.e. at the same site as the
296
endogenous tyrosinase.27 In the tyrosinase from P. arcularius, the cleavage site was predicted
297
to be F393 on the basis of the sequence alignment with the aforementioned enzymes
298
(Supporting information; Figure S13). The cleavage site in the recombinant enzyme digested
299
by trypsin was R388 and was thus close to the predicted one. The action of trypsin on the
300
evolutionarily distant tyrosinase from A. oryzae was different: the proenzyme was cleaved at
301
two sites (K312 and K457) and the holoenzyme thus consisted of two large and two small
302
subunits containing residues 2-312 and 313-457, respectively.26
303
It was speculated that the C-terminal domain may have similar effects to the chaperone-
304
like bacterial proteins which are probably responsible for copper incorporation into tyrosinase
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molecules.27 The notion of its importance for the post-translational processing of the pro-
306
tyrosinase was supported by the observation that the expression of genes coding for mature
307
tyrosinases from P. microspora, A. oryzae and A. bisporus failed to produce active enzymes.
308
26,27,51
309
conclusion.
Our attempts to express the tyrosinase from P. arcularius in this way led to the same
310
Few fungal tyrosinases, which share differing levels of amino acid sequence identities (29
311
- 69 %) with the new tyrosinase from P. arcularius, have been biochemically characterized so
312
far (Table 2). The majority of these enzymes exhibited apparent molecular weights of 42-45
313
kDa in SDS-PAGE. The number of subunits in the holoenzyme was determined in P.
314
sanguineus22 and P. arcularius, and the enzymes were found to be a monomer and a dimer,
315
respectively. However, it cannot be excluded that the dimer is artificially formed due to
316
protein cross-linking.25 The tyrosinase from A. oryzae, which is evolutionarily distant from
317
these enzymes (see above), is a heterotetramer consisting of two 36 kDa and two 18-kDa
318
subunits resulting from the double cleavage of the pro-tyrosinase.26 The endogenous
319
tyrosinases from A. bisporus are also composed of two large and two small subunits, the large
320
subunits being themselves active.25
321
The specific tyrosinase activity for L-DOPA was the highest in P. arcularius, followed by
322
P. sanguineus22, A. bisporus33 and T. resei23-24 (in this order). The Km values for L-DOPA were
323
in a broad range from approximately 1 µM in A. bisporus PPO2 isoenzyme33 or P. sanguineus44
324
to 1.930 mM in P. microspora,31 that of P. arcularius (1.04 mM) being similar to that in P.
325
microspora. The kcat for L-DOPA with the tyrosinase from P. arcularius was ca. half of that
326
with the tyrosinase from P. microspora, but higher than with the other fungal enzymes.
327
Tyrosinases generally exhibit lower activities for L-tyrosine compared to L-DOPA. For instance,
328
in the enzymes from T. reesei23,24 , A. bisporus47and the human tyrosinase47, the former
329
substrate was transformed at reaction rates one to two orders of magnitude lower. The
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tyrosinase from P. sanguineus22 and the bacterial tyrosinase from S. antibioticus47 exhibited
331
higher relative activites for L-tyrosine (ca. 25-30%) compared to L-DOPA. In the enzyme from
332
P. arcularius, this relative activity was only ca. 1%, which, however, could be also caused by
333
low substrate concentrations. It must be noted that using high concentrations of this substrate
334
(e.g. 10 mM) is difficult due to its low solubility in water (ca. 2.5 mM).23
335
The typical pH optimum of the enzymes was 6.0-7.0 but the tyrosinase from T. reesei
336
exhibited an optimum of pH 9.0 when expressed in the native organism. In contrast, the pH
337
optimum of the same enzyme produced in P. pastoris was lower (6.0),23,24 possibly due to
338
different proteolytic cleavage in different hosts and/or different glycosylation patterns. The pH
339
optimum of P. arcularius (5.5) was slightly lower than in the aforementioned enzymes.
340
Aurones is a type of flavonoids occurring in numerous plants, where they generate a gold-
341
yellow coloration. The therapeutic potential of these compounds and their synthetic analogues
342
have not yet been fully explored. One of their biological activities is their inhibition effect on
343
the tyrosinase activity in human melanocytes and the lead structure with B-ring hydroxylation
344
at the C-4´ position was identified. The inhibitory effects of such compounds seemed to be
345
much stronger than those of the well-known tyrosinase inhibitors arbutin and kojic acid. In
346
addition, toxicity studies in animals (rats, rabbits) revealed no adverse effects of these
347
aurones.52 The relationships between the substitution patterns and the inhibitory activity of
348
aurones was then also studied with the purified enzymes from A. bisporus, S. antibioticus30
349
and P. arcularius (this work) and the structures were optimized. Thus aurons with the
350
resorcinol moiety were the most powerful inhibitors of all three enzymes. In contrast, some
351
aurone analogues with other substitution patterns exhibited different effects on different
352
tyrosinases. It was previously hypothesized that this may be associated with the holoenzyme’s
353
structure (tetramer in A. bisporus, dimer in S. antibioticus). However, the P. arcularius
354
tyrosinase which probably is also a dimer, behaved in a similar way to the enzyme from A.
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bisporus. Thus the reason for the different behaviour of the fungal tyrosinases on one hand,
356
and bacterial on the other, may instead be the difference in the regions surrounding their
357
active sites.
358
In conclusion, a new tyrosinase from P. arcularius was produced at a high yield and its
359
utility as a model for studying tyrosinase inhibitors, activators and substrates was
360
demonstrated. An optimized E. coli expression system was used to produce the enzyme in its
361
latent form, which was then activated by a partial proteolytic cleavage. This strategy ruled out
362
the toxic effects of the active tyrosinase on the host as well as the unwanted manifestation of
363
the tyrosinase activity (potential protein oxidation and aggregation) during purification.
364
Compared to the commercial tyrosinase from A. bisporus, it has the advantage of having a
365
higher specific activity but, primarily, of containing only one isoenzyme and being void of the
366
impurities present in tyrosinases prepared from fungi.
367 368
ABBREVIATIONS USED
369
L-DOPA, 3,4-dihydroxy-L-phenylalanine
370
PMSF, phenylmethanesulfonyl fluoride
371
TBC, tert-butylcatechol
372
TCEP, tris(2-carboxyethyl)phosphine
373 374
ACKNOWLEDGEMENT
375
The Ministry of Education, Youth and Sports of the Czech Republic (project LD12049), the
376
Technology Agency of the Czech Republic (TA04021212), the Institute of Microbiology of
377
the Czech Academy of Sciences (internal project RVO61388971), the Agence Nationale pour
378
la Recherche (Labex Arcane ANR-11-LABX-0003-01 and Blanc program 2Cu-TargMelanin
379
ANR-09-BLAN-0028-01/02/03) and the European COST Program (COST action CM1003
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WG 2), within whose framework this work was carried out, are gratefully acknowledged for
381
their financial support. Access to the MS facility was enabled by the Operational Program
382
Prague – Competitiveness project (CZ.2.16/3.1.00/24023) and project LO1509 of the Ministry
383
of Education, Youth and Sports of the Czech Republic.
384
acknowledge the financial support of her short-term stay at the Aix Marseille Université
385
through the STSM-CM1003-300315-052174 fellowship.
386
The authors declare no competing financial interest.
E. Marková would like to
387 388
SUPPORTING INFORMATION
389
Table S1 Activation of wild-type and recombinant pro-tyrosinases by proteolytic cleavage.
390
Figure S1 SDS-PAGE of the cell extract from E. coli expressing the gene coding for the
391
hypothetical active part of tyrosinase from P. arcularius.
392
Figure S2 Purification of the trypsin-treated tyrosinase by size-exclusion chromatography.
393
Figure S3 Amino acid sequence of the His6-tagged pro-tyrosinase fusion protein.
394
Figure S4 Plot of initial rates of oxidation of L-DOPA catalysed by tyrosinase from P.
395
arcularius vs. substrate concentrations.
396
Figure S5 Effect of pH on the tyrosinase activity.
397
Figure S6 Effect of temperature on the tyrosinase activity (A) and stability (B).
398
Figure S7 Plots of initial rates of oxidation of aurones 2b (A) and 3c (B) catalysed by
399
tyrosinase from P. arcularius vs. substrate concentrations.
400
Figure S8 Effects of aurones 2a (A) and 3b (B) on L-DOPA oxidation catalysed by tyrosinase
401
from P. arcularius.
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Figure S9 Effect of aurone 1b on L-DOPA oxidation catalysed by tyrosinase from P.
403
arcularius.
404
Figure S10 Effects of aurones 1a (A) and 3a (B) on L-DOPA oxidation catalysed by
405
tyrosinase from P. arcularius.
406
Figure S11 Lineweaver-Burk plot of inhibition of tyrosinase from P. arcularius by aurone
407
1b.
408
Figure S12 Dixon plot of inhibition of tyrosinase from P. arcularius by aurone 1b.
409
Figure S13 Multiple sequence alignment of characterized fungal tyrosinases.
410
This material is available free of charge via the Internet at http://pubs.acs.org.
411
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Figure 1. Structures of tyrosinase effectors examined in this work
562
Figure 2. Production in E. coli and partial purification of tyrosinase from Polyporus
563
arcularius. Lane 1: marker; Lane 2: cell-free extract; Lane 3: pro-tyrosinase purified by Ni
564
affinity chromatography; Lane 4: trypsin-treated tyrosinase; Lane 5: trypsin-treated
565
tyrosinase purified by size-exclusion chromatography. Molecular weight markers in kDa.
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Pro-tyrosinase (68 kDa) and GroEL (60 kDa) in lane 3 and tyrosinase (43 kDa) in lane 5 are
567
indicated with arrows.
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Table 1. Activity of aurones towards tyrosinases from Agaricus bisporus, Streptomyces antiobioticus and Polyporus arcularius Tyrosinase from Compound
1a
1b
2a
2b
3a
3b
3c
Streptomyces
Polyporus arcularius
Agaricus bisporus
n.a.
n.a.
n.a.
I
I
I
(IC50 = 34 ± 3 µM)
(IC50 = 9 ± 1 µM)
(IC50 = 4 ± 1 µM)
H.A
H.A.
I
(145%)
(240%)
(IC50 > 1 mM)
S
S
S
(Km = 26 ± 9 µM)
(Km = 4.8 ± 0.1 µM)
(Km = 9 ± 2 µM)
n.a.
n.a.
n.a.
H.A
H.A.
I
(167%)
(150%)
(IC50 > 0.2 mM)
S
S
S
(Km = 63±20 µM )
(Km = 18.2±0.1 µM )
(Km = 0.20 ± 0.02 µM)
antiobioticus
H.A. = hyperbolic activation; I = inhibitor, S = substrate, n. a. = no activity; n.d. = not determined Note: The Km or IC50 (µM) towards each substrate or inhibitor, respectively, is given in brackets. Data for the tyrosinases from A. bisporus and S. antiobioticus are adopted from the previous work (Haudecoeur et al. 2014).
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Table 2. Biochemical properties of purified fungal tyrosinases Source
Identity, %
Molecular mass, kDa Specific activity,
Kinetic parameters,
(cover, %)a
-1 (Subunit/holoenzyme) U mg protein
Km, µM/kcat, s-1
(substrate)
Agaricus bisporus
Reference
(substrate)
40 (58)
65, 21/n.d.
27.4±3.4 (L-DOPA)
1.22/141 (L-DOPA)
(33)
Aspergillus oryzae
29 (50)
36, 18/102
n.d.
43/49 (L-tyrosine)
(26)
Pholiota microspora
55 (98)
42b, 44c/n.d.
412 (TBC)b
1,930/478 (L-DOPA)b
(27, 31)
(PPO2 isoform)
163/294 (TBC)b 189/162 (TBC)c Polyporus arcularius
-
43/79
127 ± 9 (L-DOPA)
1,040/223 (L-DOPA)
This work
84.3 (L-DOPA)
0.9/85 (L-DOPA)
(22)
30.2 (L-tyrosine)
1.0/41 (L-tyrosine)
303 ± 17 (TBC) Pycnoporus sanguineus
69 (98)
45/45
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Trichoderma reesei
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35 (67)
43/n.d.
15.4-23.0 (L-DOPA)d
3,000/22 (L-DOPA)
(23, 24)
0.42-0.54 (L-tyrosine)d a
comparing the amino acid sequences to tyrosinase from P. arcularius (template)
b
endogenous
c
recombinant
d
different for tyrosinases produced in different hosts (T. reesei, P. pastoris)
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R3 R4
B
R1
O R5
A R2
O
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1a R1, R3, R4, R5 = H; R2 = OH 1b R1, R4 = H; R2, R3; R5 = OH 2a R 2, R3, R5 = H; R1, R4 = OH 2b R2, R4, R5 = H; R1, R3 = OH 3a R3, R4, R5 = H; R1, R2 = OH 3b R3, R5 = H; R1, R2, R4 = OH 3c R4, R5 = H; R1, R2, R3 = OH
Figure 1
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kDa
1
2
3
4
5
97 66
45
30
21
14
Figure 2
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TOC graphic 191x129mm (96 x 96 DPI)
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